RNA–Protein interactions for RNA: ENSMUST00000064349.5

A330008L17Rik-201, mousemouse

TSL 1 (best) BASIC

Gene A330008L17Rik, Length 3,220 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A330008L17Rik-201ENSMUST00000064349 Gm35339A0A140LHH9 1649 aa16.53■□□□□ 0.24
A330008L17Rik-201ENSMUST00000064349 NischQ80TM9 1593 aa16.5■□□□□ 0.23
A330008L17Rik-201ENSMUST00000064349 Abcc9P70170 1546 aa16.04■□□□□ 0.16
A330008L17Rik-201ENSMUST00000064349 Abcc8B2RUS7 1588 aa15.83■□□□□ 0.13
A330008L17Rik-201ENSMUST00000064349 ScribQ80U72 1612 aa14.99□□□□□ -0.01
A330008L17Rik-201ENSMUST00000064349 Dcaf1Q80TR8 1506 aa14.7□□□□□ -0.06
A330008L17Rik-201ENSMUST00000064349 Rhox8Q6VSS7 320 aa14.68□□□□□ -0.06
A330008L17Rik-201ENSMUST00000064349 Kdm5dQ62240 1548 aa14.58□□□□□ -0.08
A330008L17Rik-201ENSMUST00000064349 NacadQ5SWP3 1504 aa14.5□□□□□ -0.09
A330008L17Rik-201ENSMUST00000064349 Rb1cc1Q9ESK9 1588 aa14.41□□□□□ -0.1
A330008L17Rik-201ENSMUST00000064349 Ccdc180J3QNE4 1664 aa14.31□□□□□ -0.12
A330008L17Rik-201ENSMUST00000064349 Baz1aO88379 1555 aa14.25□□□□□ -0.13
A330008L17Rik-201ENSMUST00000064349 Sycp2Q9CUU3 1500 aa14.23□□□□□ -0.13
A330008L17Rik-201ENSMUST00000064349 Rtl1Q7M732 1744 aa14.22□□□□□ -0.13
A330008L17Rik-201ENSMUST00000064349 Crybg2B7ZCC2 1516 aa14.12□□□□□ -0.15
A330008L17Rik-201ENSMUST00000064349 BicraF8VPZ9 1578 aa14□□□□□ -0.17
A330008L17Rik-201ENSMUST00000064349 Zcchc6Q5BLK4 1491 aaKnown RBP13.95□□□□□ -0.18
A330008L17Rik-201ENSMUST00000064349 Smarca2Q6DIC0 1577 aa13.92□□□□□ -0.18
A330008L17Rik-201ENSMUST00000064349 Ccdc136Q3TVA9 1136 aa13.71□□□□□ -0.21
A330008L17Rik-201ENSMUST00000064349 Cecr2E9Q2Z1 1453 aa13.7□□□□□ -0.22
A330008L17Rik-201ENSMUST00000064349 Smarca4Q3TKT4 1613 aaKnown RBP13.49□□□□□ -0.25
A330008L17Rik-201ENSMUST00000064349 Synj1Q8CHC4 1574 aa13.48□□□□□ -0.25
A330008L17Rik-201ENSMUST00000064349 Brd4Q9ESU6 1400 aaKnown RBP13.47□□□□□ -0.25
A330008L17Rik-201ENSMUST00000064349 Trim41Q5NCC3 630 aa13.47□□□□□ -0.25
A330008L17Rik-201ENSMUST00000064349 CftrP26361 1476 aa13.43□□□□□ -0.26
A330008L17Rik-201ENSMUST00000064349 Atad2bE9Q166 1460 aaKnown RBP13.38□□□□□ -0.27
A330008L17Rik-201ENSMUST00000064349 Cttnbp2B9EJA2 1648 aa13.37□□□□□ -0.27
A330008L17Rik-201ENSMUST00000064349 Pds5bQ4VA53 1446 aaKnown RBP13.37□□□□□ -0.27
A330008L17Rik-201ENSMUST00000064349 Iqgap2Q3UQ44 1575 aa13.36□□□□□ -0.27
A330008L17Rik-201ENSMUST00000064349 HrcG5E8J6 738 aa13.28□□□□□ -0.28
A330008L17Rik-201ENSMUST00000064349 Golga3P55937 1487 aa13.23□□□□□ -0.29
A330008L17Rik-201ENSMUST00000064349 Top2bQ64511 1612 aa13.21□□□□□ -0.3
A330008L17Rik-201ENSMUST00000064349 Frmpd1A2AKB4 1549 aa13.17□□□□□ -0.3
A330008L17Rik-201ENSMUST00000064349 Wdr62Q3U3T8 1523 aa13.17□□□□□ -0.3
A330008L17Rik-201ENSMUST00000064349 Thoc2B1AZI6 1594 aaKnown RBP13.13□□□□□ -0.31
A330008L17Rik-201ENSMUST00000064349 Esf1Q3V1V3 845 aaKnown RBP13.11□□□□□ -0.31
A330008L17Rik-201ENSMUST00000064349 Cngb1E1AZ71 1325 aa13.11□□□□□ -0.31
A330008L17Rik-201ENSMUST00000064349 Rsf1E9PWW9 1441 aaKnown RBP13.11□□□□□ -0.31
A330008L17Rik-201ENSMUST00000064349 Ccdc88bQ4QRL3 1481 aa13.08□□□□□ -0.32
A330008L17Rik-201ENSMUST00000064349 Ercc6F8VPZ5 1481 aa13.07□□□□□ -0.32
A330008L17Rik-201ENSMUST00000064349 Unc13aQ4KUS2 1712 aa13.06□□□□□ -0.32
A330008L17Rik-201ENSMUST00000064349 Chic1Q8CBW7 227 aa13.05□□□□□ -0.32
A330008L17Rik-201ENSMUST00000064349 Cc2d2aQ8CFW7 1633 aa13.05□□□□□ -0.32
A330008L17Rik-201ENSMUST00000064349 Cep164Q5DU05 1446 aa13.04□□□□□ -0.32
A330008L17Rik-201ENSMUST00000064349 Fmn1Q05860 1466 aa12.96□□□□□ -0.33
A330008L17Rik-201ENSMUST00000064349 TnnQ80Z71 1560 aa12.95□□□□□ -0.34
A330008L17Rik-201ENSMUST00000064349 Fam135aQ6NS59 1506 aa12.92□□□□□ -0.34
A330008L17Rik-201ENSMUST00000064349 Lamc3Q9R0B6 1581 aa12.92□□□□□ -0.34
A330008L17Rik-201ENSMUST00000064349 Phldb1Q6PDH0 1371 aaKnown RBP12.9□□□□□ -0.34
A330008L17Rik-201ENSMUST00000064349 Top2aQ01320 1528 aaKnown RBP12.87□□□□□ -0.35
A330008L17Rik-201ENSMUST00000064349 Dnajc5bQ9CQ94 199 aa12.85□□□□□ -0.35
A330008L17Rik-201ENSMUST00000064349 Kif15Q6P9L6 1387 aa12.81□□□□□ -0.36
A330008L17Rik-201ENSMUST00000064349 Ubl4bQ9CQ84 188 aa12.76□□□□□ -0.37
A330008L17Rik-201ENSMUST00000064349 Gab3Q8BSM5 595 aa12.74□□□□□ -0.37
A330008L17Rik-201ENSMUST00000064349 Camsap1A2AHC3 1581 aa12.74□□□□□ -0.37
A330008L17Rik-201ENSMUST00000064349 Rapgef2Q8CHG7 1496 aa12.71□□□□□ -0.37
A330008L17Rik-201ENSMUST00000064349 Cux2P70298 1426 aa12.7□□□□□ -0.38
A330008L17Rik-201ENSMUST00000064349 Baz1bQ9Z277 1479 aa12.68□□□□□ -0.38
A330008L17Rik-201ENSMUST00000064349 PtprkP35822 1457 aa12.63□□□□□ -0.39
A330008L17Rik-201ENSMUST00000064349 Ccdc18Q640L5 1455 aa12.63□□□□□ -0.39
A330008L17Rik-201ENSMUST00000064349 Eif4g1Q6NZJ6 1600 aaKnown RBP12.62□□□□□ -0.39
A330008L17Rik-201ENSMUST00000064349 Grin2bQ01097 1482 aa12.61□□□□□ -0.39
A330008L17Rik-201ENSMUST00000064349 NrkQ9R0G8 1455 aa12.6□□□□□ -0.39
A330008L17Rik-201ENSMUST00000064349 Il27Q8K3I6 234 aa12.6□□□□□ -0.39
A330008L17Rik-201ENSMUST00000064349 Mrc2Q64449 1479 aa12.58□□□□□ -0.4
A330008L17Rik-201ENSMUST00000064349 Cep162Q6ZQ06 1403 aa12.58□□□□□ -0.4
A330008L17Rik-201ENSMUST00000064349 Shroom4Q1W617 1475 aa12.56□□□□□ -0.4
A330008L17Rik-201ENSMUST00000064349 LrpprcQ6PB66 1392 aaKnown RBP12.54□□□□□ -0.4
A330008L17Rik-201ENSMUST00000064349 Npm1Q61937 292 aaKnown RBP12.54□□□□□ -0.4
A330008L17Rik-201ENSMUST00000064349 PogzQ8BZH4 1409 aaKnown RBP12.52□□□□□ -0.4
A330008L17Rik-201ENSMUST00000064349 Kif21aQ9QXL2 1672 aa12.52□□□□□ -0.4
A330008L17Rik-201ENSMUST00000064349 Arhgap35Q91YM2 1499 aa12.51□□□□□ -0.41
A330008L17Rik-201ENSMUST00000064349 Duox2A2AQ99 1517 aa12.48□□□□□ -0.41
A330008L17Rik-201ENSMUST00000064349 Efcab5A0JP43 1406 aa12.48□□□□□ -0.41
A330008L17Rik-201ENSMUST00000064349 Ehmt2Q9Z148 1263 aaKnown RBP12.47□□□□□ -0.41
A330008L17Rik-201ENSMUST00000064349 Dhx29Q6PGC1 1365 aaKnown RBP12.46□□□□□ -0.41
A330008L17Rik-201ENSMUST00000064349 Npm2Q80W85 207 aa12.45□□□□□ -0.42
A330008L17Rik-201ENSMUST00000064349 Mroh2bQ7M6Y6 1581 aa12.44□□□□□ -0.42
A330008L17Rik-201ENSMUST00000064349 Map3k1P53349 1493 aa12.43□□□□□ -0.42
A330008L17Rik-201ENSMUST00000064349 Samd9lQ69Z37 1561 aa12.42□□□□□ -0.42
A330008L17Rik-201ENSMUST00000064349 Crocc2F6XLV1 1638 aa12.41□□□□□ -0.42
A330008L17Rik-201ENSMUST00000064349 Myt1lP97500 1187 aa12.37□□□□□ -0.43
A330008L17Rik-201ENSMUST00000064349 AqrQ8CFQ3 1481 aaKnown RBP12.35□□□□□ -0.43
A330008L17Rik-201ENSMUST00000064349 Plb1Q3TTY0 1478 aa12.35□□□□□ -0.43
A330008L17Rik-201ENSMUST00000064349 Urb2E9Q7L1 1524 aaKnown RBP12.35□□□□□ -0.43
A330008L17Rik-201ENSMUST00000064349 SynmQ70IV5 1561 aa12.33□□□□□ -0.43
A330008L17Rik-201ENSMUST00000064349 Lrriq1Q0P5X1 1673 aa12.32□□□□□ -0.44
A330008L17Rik-201ENSMUST00000064349 Rad54l2Q99NG0 1466 aa12.32□□□□□ -0.44
A330008L17Rik-201ENSMUST00000064349 Clip1Q922J3 1391 aa12.32□□□□□ -0.44
A330008L17Rik-201ENSMUST00000064349 Disp1Q3TDN0 1521 aa12.29□□□□□ -0.44
A330008L17Rik-201ENSMUST00000064349 Magi3Q9EQJ9 1476 aa12.29□□□□□ -0.44
A330008L17Rik-201ENSMUST00000064349 Carmil1Q6EDY6 1374 aa12.28□□□□□ -0.44
A330008L17Rik-201ENSMUST00000064349 Ankrd26Q811D2 1581 aa12.27□□□□□ -0.44
A330008L17Rik-201ENSMUST00000064349 Pla2r1Q62028 1487 aa12.26□□□□□ -0.45
A330008L17Rik-201ENSMUST00000064349 Setd1bQ8CFT2 1985 aa12.26□□□□□ -0.45
A330008L17Rik-201ENSMUST00000064349 Arap1Q4LDD4 1452 aa12.26□□□□□ -0.45
A330008L17Rik-201ENSMUST00000064349 Erich3F6QRE9 1637 aa12.25□□□□□ -0.45
A330008L17Rik-201ENSMUST00000064349 Zeb1Q64318 1117 aa12.25□□□□□ -0.45
A330008L17Rik-201ENSMUST00000064349 Cux1P53564 1515 aa12.25□□□□□ -0.45
A330008L17Rik-201ENSMUST00000064349 Acin1Q9JIX8 1338 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms