RNA–Protein interactions for RNA: ENSMUST00000056931.13

Ldb1-202, Transcript of LIM domain-binding protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldb1, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-202ENSMUST00000056931 NischQ80TM9 1593 aa41,13■■■■■ 4,18
Ldb1-202ENSMUST00000056931 Gm35339A0A140LHH9 1649 aa40,95■■■■■ 4,15
Ldb1-202ENSMUST00000056931 Abcc9P70170 1546 aa39,88■■■■□ 3,97
Ldb1-202ENSMUST00000056931 Abcc8B2RUS7 1588 aa39,37■■■■□ 3,89
Ldb1-202ENSMUST00000056931 ScribQ80U72 1612 aa37,3■■■■□ 3,56
Ldb1-202ENSMUST00000056931 Rhox8Q6VSS7 320 aa37■■■■□ 3,51
Ldb1-202ENSMUST00000056931 Dcaf1Q80TR8 1506 aa36,42■■■■□ 3,42
Ldb1-202ENSMUST00000056931 Kdm5dQ62240 1548 aa36,35■■■■□ 3,41
Ldb1-202ENSMUST00000056931 NacadQ5SWP3 1504 aa36,15■■■■□ 3,38
Ldb1-202ENSMUST00000056931 Rb1cc1Q9ESK9 1588 aa35,96■■■■□ 3,35
Ldb1-202ENSMUST00000056931 Baz1aO88379 1555 aa35,48■■■■□ 3,27
Ldb1-202ENSMUST00000056931 Ccdc180J3QNE4 1664 aa35,42■■■■□ 3,26
Ldb1-202ENSMUST00000056931 Sycp2Q9CUU3 1500 aa35,41■■■■□ 3,26
Ldb1-202ENSMUST00000056931 Rtl1Q7M732 1744 aa35,34■■■■□ 3,25
Ldb1-202ENSMUST00000056931 Crybg2B7ZCC2 1516 aa34,98■■■■□ 3,19
Ldb1-202ENSMUST00000056931 Zcchc6Q5BLK4 1491 aaKnown RBP34,9■■■■□ 3,18
Ldb1-202ENSMUST00000056931 BicraF8VPZ9 1578 aa34,82■■■■□ 3,16
Ldb1-202ENSMUST00000056931 Smarca2Q6DIC0 1577 aa34,6■■■■□ 3,13
Ldb1-202ENSMUST00000056931 Ccdc136Q3TVA9 1136 aa34,5■■■■□ 3,11
Ldb1-202ENSMUST00000056931 Cecr2E9Q2Z1 1453 aa34,13■■■■□ 3,05
Ldb1-202ENSMUST00000056931 Trim41Q5NCC3 630 aa33,73■■■□□ 2,99
Ldb1-202ENSMUST00000056931 Brd4Q9ESU6 1400 aaKnown RBP33,66■■■□□ 2,98
Ldb1-202ENSMUST00000056931 Smarca4Q3TKT4 1613 aaKnown RBP33,65■■■□□ 2,98
Ldb1-202ENSMUST00000056931 Synj1Q8CHC4 1574 aa33,59■■■□□ 2,97
Ldb1-202ENSMUST00000056931 Rpgrip1Q9EPQ2 1331 aa33,52■■■□□ 2,96
Ldb1-202ENSMUST00000056931 CftrP26361 1476 aa33,47■■■□□ 2,95
Ldb1-202ENSMUST00000056931 Pds5bQ4VA53 1446 aaKnown RBP33,41■■■□□ 2,94
Ldb1-202ENSMUST00000056931 Atad2bE9Q166 1460 aaKnown RBP33,39■■■□□ 2,94
Ldb1-202ENSMUST00000056931 Iqgap2Q3UQ44 1575 aa33,33■■■□□ 2,93
Ldb1-202ENSMUST00000056931 Cttnbp2B9EJA2 1648 aa33,33■■■□□ 2,93
Ldb1-202ENSMUST00000056931 Esf1Q3V1V3 845 aaKnown RBP33,09■■■□□ 2,89
Ldb1-202ENSMUST00000056931 Cngb1E1AZ71 1325 aa33,05■■■□□ 2,88
Ldb1-202ENSMUST00000056931 HrcG5E8J6 738 aa33,03■■■□□ 2,88
Ldb1-202ENSMUST00000056931 Golga3P55937 1487 aa32,99■■■□□ 2,87
Ldb1-202ENSMUST00000056931 Frmpd1A2AKB4 1549 aa32,83■■■□□ 2,85
Ldb1-202ENSMUST00000056931 Wdr62Q3U3T8 1523 aa32,82■■■□□ 2,84
Ldb1-202ENSMUST00000056931 Ercc6F8VPZ5 1481 aa32,79■■■□□ 2,84
Ldb1-202ENSMUST00000056931 Top2bQ64511 1612 aa32,79■■■□□ 2,84
Ldb1-202ENSMUST00000056931 Acin1Q9JIX8 1338 aaKnown RBP32,73■■■□□ 2,83
Ldb1-202ENSMUST00000056931 Thoc2B1AZI6 1594 aaKnown RBP32,72■■■□□ 2,83
Ldb1-202ENSMUST00000056931 Rsf1E9PWW9 1441 aaKnown RBP32,63■■■□□ 2,81
Ldb1-202ENSMUST00000056931 Chic1Q8CBW7 227 aa32,61■■■□□ 2,81
Ldb1-202ENSMUST00000056931 Ccdc88bQ4QRL3 1481 aa32,6■■■□□ 2,81
Ldb1-202ENSMUST00000056931 Cc2d2aQ8CFW7 1633 aa32,56■■■□□ 2,8
Ldb1-202ENSMUST00000056931 Unc13aQ4KUS2 1712 aa32,49■■■□□ 2,79
Ldb1-202ENSMUST00000056931 Cep164Q5DU05 1446 aa32,48■■■□□ 2,79
Ldb1-202ENSMUST00000056931 Fmn1Q05860 1466 aa32,31■■■□□ 2,76
Ldb1-202ENSMUST00000056931 Dnajc5bQ9CQ94 199 aa32,29■■■□□ 2,76
Ldb1-202ENSMUST00000056931 Phldb1Q6PDH0 1371 aaKnown RBP32,27■■■□□ 2,76
Ldb1-202ENSMUST00000056931 Fam135aQ6NS59 1506 aa32,19■■■□□ 2,74
Ldb1-202ENSMUST00000056931 TnnQ80Z71 1560 aa32,14■■■□□ 2,74
Ldb1-202ENSMUST00000056931 Lamc3Q9R0B6 1581 aa32,13■■■□□ 2,73
Ldb1-202ENSMUST00000056931 Kif15Q6P9L6 1387 aa32,12■■■□□ 2,73
Ldb1-202ENSMUST00000056931 Gab3Q8BSM5 595 aa32,11■■■□□ 2,73
Ldb1-202ENSMUST00000056931 Ehmt2Q9Z148 1263 aaKnown RBP32,09■■■□□ 2,73
Ldb1-202ENSMUST00000056931 Ubl4bQ9CQ84 188 aa32,05■■■□□ 2,72
Ldb1-202ENSMUST00000056931 Top2aQ01320 1528 aaKnown RBP32,01■■■□□ 2,71
Ldb1-202ENSMUST00000056931 Il27Q8K3I6 234 aa31,82■■■□□ 2,68
Ldb1-202ENSMUST00000056931 Cux2P70298 1426 aa31,8■■■□□ 2,68
Ldb1-202ENSMUST00000056931 Camsap1A2AHC3 1581 aa31,76■■■□□ 2,67
Ldb1-202ENSMUST00000056931 Ccdc18Q640L5 1455 aa31,65■■■□□ 2,66
Ldb1-202ENSMUST00000056931 Rapgef2Q8CHG7 1496 aa31,58■■■□□ 2,65
Ldb1-202ENSMUST00000056931 Npm1Q61937 292 aaKnown RBP31,55■■■□□ 2,64
Ldb1-202ENSMUST00000056931 Pcgf6Q99NA9 353 aa31,52■■■□□ 2,64
Ldb1-202ENSMUST00000056931 Baz1bQ9Z277 1479 aa31,51■■■□□ 2,64
Ldb1-202ENSMUST00000056931 Mrc2Q64449 1479 aa31,5■■■□□ 2,63
Ldb1-202ENSMUST00000056931 PtprkP35822 1457 aa31,47■■■□□ 2,63
Ldb1-202ENSMUST00000056931 Grin2bQ01097 1482 aa31,45■■■□□ 2,63
Ldb1-202ENSMUST00000056931 Npm2Q80W85 207 aa31,43■■■□□ 2,62
Ldb1-202ENSMUST00000056931 Cep162Q6ZQ06 1403 aa31,36■■■□□ 2,61
Ldb1-202ENSMUST00000056931 LrpprcQ6PB66 1392 aaKnown RBP31,35■■■□□ 2,61
Ldb1-202ENSMUST00000056931 NrkQ9R0G8 1455 aa31,35■■■□□ 2,61
Ldb1-202ENSMUST00000056931 Shroom4Q1W617 1475 aa31,32■■■□□ 2,6
Ldb1-202ENSMUST00000056931 Kif21aQ9QXL2 1672 aa31,29■■■□□ 2,6
Ldb1-202ENSMUST00000056931 PogzQ8BZH4 1409 aaKnown RBP31,25■■■□□ 2,59
Ldb1-202ENSMUST00000056931 Eif4g1Q6NZJ6 1600 aaKnown RBP31,24■■■□□ 2,59
Ldb1-202ENSMUST00000056931 Myt1lP97500 1187 aa31,23■■■□□ 2,59
Ldb1-202ENSMUST00000056931 Dhx29Q6PGC1 1365 aaKnown RBP31,22■■■□□ 2,59
Ldb1-202ENSMUST00000056931 Duox2A2AQ99 1517 aa31,18■■■□□ 2,58
Ldb1-202ENSMUST00000056931 Arhgap35Q91YM2 1499 aa31,16■■■□□ 2,58
Ldb1-202ENSMUST00000056931 Efcab5A0JP43 1406 aa31,1■■■□□ 2,57
Ldb1-202ENSMUST00000056931 Crocc2F6XLV1 1638 aa31,04■■■□□ 2,56
Ldb1-202ENSMUST00000056931 Zeb1Q64318 1117 aa31,03■■■□□ 2,56
Ldb1-202ENSMUST00000056931 Samd9lQ69Z37 1561 aa31,01■■■□□ 2,55
Ldb1-202ENSMUST00000056931 Mroh2bQ7M6Y6 1581 aa30,98■■■□□ 2,55
Ldb1-202ENSMUST00000056931 Map3k1P53349 1493 aa30,91■■■□□ 2,54
Ldb1-202ENSMUST00000056931 Plb1Q3TTY0 1478 aa30,89■■■□□ 2,54
Ldb1-202ENSMUST00000056931 Supt5hO55201 1082 aaKnown RBP30,87■■■□□ 2,53
Ldb1-202ENSMUST00000056931 Urb2E9Q7L1 1524 aaKnown RBP30,84■■■□□ 2,53
Ldb1-202ENSMUST00000056931 Rad54l2Q99NG0 1466 aa30,84■■■□□ 2,53
Ldb1-202ENSMUST00000056931 Lrriq1Q0P5X1 1673 aa30,8■■■□□ 2,52
Ldb1-202ENSMUST00000056931 Clip1Q922J3 1391 aa30,8■■■□□ 2,52
Ldb1-202ENSMUST00000056931 SynmQ70IV5 1561 aa30,77■■■□□ 2,52
Ldb1-202ENSMUST00000056931 AqrQ8CFQ3 1481 aaKnown RBP30,7■■■□□ 2,51
Ldb1-202ENSMUST00000056931 NefmP08553 848 aa30,66■■■□□ 2,5
Ldb1-202ENSMUST00000056931 Carmil1Q6EDY6 1374 aa30,66■■■□□ 2,5
Ldb1-202ENSMUST00000056931 Disp1Q3TDN0 1521 aa30,64■■■□□ 2,5
Ldb1-202ENSMUST00000056931 Magi3Q9EQJ9 1476 aa30,61■■■□□ 2,49
Ldb1-202ENSMUST00000056931 Eea1Q8BL66 1411 aa30,58■■■□□ 2,49
Ldb1-202ENSMUST00000056931 Pla2r1Q62028 1487 aa30,58■■■□□ 2,49
Retrieved 100 of 22,080 RNA–protein pairs in 44,7 ms