RNA–Protein interactions for RNA: ENSMUST00000052179.7

Pcdhb20-201, Transcript of Protocadherin beta 20, mousemouse

APPRIS P1 BASIC

Gene Pcdhb20, Length 3,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20-201ENSMUST00000052179 NischQ80TM9 1593 aa21.1■□□□□ 0.97
Pcdhb20-201ENSMUST00000052179 Gm35339A0A140LHH9 1649 aa20.79■□□□□ 0.92
Pcdhb20-201ENSMUST00000052179 Abcc9P70170 1546 aa20.38■□□□□ 0.85
Pcdhb20-201ENSMUST00000052179 Abcc8B2RUS7 1588 aa20.13■□□□□ 0.81
Pcdhb20-201ENSMUST00000052179 Rhox8Q6VSS7 320 aa19.37■□□□□ 0.69
Pcdhb20-201ENSMUST00000052179 ScribQ80U72 1612 aa19.05■□□□□ 0.64
Pcdhb20-201ENSMUST00000052179 Kdm5dQ62240 1548 aa18.64■□□□□ 0.57
Pcdhb20-201ENSMUST00000052179 NacadQ5SWP3 1504 aa18.55■□□□□ 0.56
Pcdhb20-201ENSMUST00000052179 Dcaf1Q80TR8 1506 aa18.54■□□□□ 0.56
Pcdhb20-201ENSMUST00000052179 Rb1cc1Q9ESK9 1588 aa18.47■□□□□ 0.55
Pcdhb20-201ENSMUST00000052179 Baz1aO88379 1555 aa18.18■□□□□ 0.5
Pcdhb20-201ENSMUST00000052179 Sycp2Q9CUU3 1500 aa18.15■□□□□ 0.5
Pcdhb20-201ENSMUST00000052179 Zcchc6Q5BLK4 1491 aaKnown RBP18.09■□□□□ 0.49
Pcdhb20-201ENSMUST00000052179 Rtl1Q7M732 1744 aa18.05■□□□□ 0.48
Pcdhb20-201ENSMUST00000052179 Ccdc136Q3TVA9 1136 aa18■□□□□ 0.47
Pcdhb20-201ENSMUST00000052179 Ccdc180J3QNE4 1664 aa17.96■□□□□ 0.47
Pcdhb20-201ENSMUST00000052179 Crybg2B7ZCC2 1516 aa17.83■□□□□ 0.44
Pcdhb20-201ENSMUST00000052179 BicraF8VPZ9 1578 aa17.79■□□□□ 0.44
Pcdhb20-201ENSMUST00000052179 Smarca2Q6DIC0 1577 aa17.67■□□□□ 0.42
Pcdhb20-201ENSMUST00000052179 Cecr2E9Q2Z1 1453 aa17.53■□□□□ 0.4
Pcdhb20-201ENSMUST00000052179 Trim41Q5NCC3 630 aa17.52■□□□□ 0.4
Pcdhb20-201ENSMUST00000052179 Brd4Q9ESU6 1400 aaKnown RBP17.35■□□□□ 0.37
Pcdhb20-201ENSMUST00000052179 Esf1Q3V1V3 845 aaKnown RBP17.34■□□□□ 0.37
Pcdhb20-201ENSMUST00000052179 Cngb1E1AZ71 1325 aa17.3■□□□□ 0.36
Pcdhb20-201ENSMUST00000052179 Smarca4Q3TKT4 1613 aaKnown RBP17.27■□□□□ 0.36
Pcdhb20-201ENSMUST00000052179 Synj1Q8CHC4 1574 aa17.24■□□□□ 0.35
Pcdhb20-201ENSMUST00000052179 Pds5bQ4VA53 1446 aaKnown RBP17.23■□□□□ 0.35
Pcdhb20-201ENSMUST00000052179 CftrP26361 1476 aa17.18■□□□□ 0.34
Pcdhb20-201ENSMUST00000052179 Atad2bE9Q166 1460 aaKnown RBP17.17■□□□□ 0.34
Pcdhb20-201ENSMUST00000052179 Iqgap2Q3UQ44 1575 aa17.13■□□□□ 0.33
Pcdhb20-201ENSMUST00000052179 Cttnbp2B9EJA2 1648 aa17.08■□□□□ 0.32
Pcdhb20-201ENSMUST00000052179 HrcG5E8J6 738 aa16.99■□□□□ 0.31
Pcdhb20-201ENSMUST00000052179 Ercc6F8VPZ5 1481 aa16.97■□□□□ 0.31
Pcdhb20-201ENSMUST00000052179 Golga3P55937 1487 aa16.97■□□□□ 0.31
Pcdhb20-201ENSMUST00000052179 Frmpd1A2AKB4 1549 aa16.86■□□□□ 0.29
Pcdhb20-201ENSMUST00000052179 Chic1Q8CBW7 227 aa16.86■□□□□ 0.29
Pcdhb20-201ENSMUST00000052179 Wdr62Q3U3T8 1523 aa16.83■□□□□ 0.28
Pcdhb20-201ENSMUST00000052179 Gab3Q8BSM5 595 aa16.81■□□□□ 0.28
Pcdhb20-201ENSMUST00000052179 Rsf1E9PWW9 1441 aaKnown RBP16.78■□□□□ 0.28
Pcdhb20-201ENSMUST00000052179 Ccdc88bQ4QRL3 1481 aa16.77■□□□□ 0.28
Pcdhb20-201ENSMUST00000052179 Thoc2B1AZI6 1594 aaKnown RBP16.73■□□□□ 0.27
Pcdhb20-201ENSMUST00000052179 Top2bQ64511 1612 aa16.72■□□□□ 0.27
Pcdhb20-201ENSMUST00000052179 Dnajc5bQ9CQ94 199 aa16.71■□□□□ 0.27
Pcdhb20-201ENSMUST00000052179 Cc2d2aQ8CFW7 1633 aa16.71■□□□□ 0.26
Pcdhb20-201ENSMUST00000052179 Cep164Q5DU05 1446 aa16.7■□□□□ 0.26
Pcdhb20-201ENSMUST00000052179 Il27Q8K3I6 234 aa16.69■□□□□ 0.26
Pcdhb20-201ENSMUST00000052179 Ubl4bQ9CQ84 188 aa16.69■□□□□ 0.26
Pcdhb20-201ENSMUST00000052179 Kif15Q6P9L6 1387 aa16.65■□□□□ 0.26
Pcdhb20-201ENSMUST00000052179 Phldb1Q6PDH0 1371 aaKnown RBP16.65■□□□□ 0.26
Pcdhb20-201ENSMUST00000052179 Fmn1Q05860 1466 aa16.61■□□□□ 0.25
Pcdhb20-201ENSMUST00000052179 Unc13aQ4KUS2 1712 aa16.57■□□□□ 0.24
Pcdhb20-201ENSMUST00000052179 Fam135aQ6NS59 1506 aa16.49■□□□□ 0.23
Pcdhb20-201ENSMUST00000052179 Npm2Q80W85 207 aa16.48■□□□□ 0.23
Pcdhb20-201ENSMUST00000052179 Ehmt2Q9Z148 1263 aaKnown RBP16.47■□□□□ 0.23
Pcdhb20-201ENSMUST00000052179 Npm1Q61937 292 aaKnown RBP16.47■□□□□ 0.23
Pcdhb20-201ENSMUST00000052179 Cux2P70298 1426 aa16.45■□□□□ 0.22
Pcdhb20-201ENSMUST00000052179 Lamc3Q9R0B6 1581 aa16.44■□□□□ 0.22
Pcdhb20-201ENSMUST00000052179 TnnQ80Z71 1560 aa16.38■□□□□ 0.21
Pcdhb20-201ENSMUST00000052179 Myt1lP97500 1187 aa16.38■□□□□ 0.21
Pcdhb20-201ENSMUST00000052179 Ccdc18Q640L5 1455 aa16.38■□□□□ 0.21
Pcdhb20-201ENSMUST00000052179 Top2aQ01320 1528 aaKnown RBP16.38■□□□□ 0.21
Pcdhb20-201ENSMUST00000052179 Zeb1Q64318 1117 aa16.33■□□□□ 0.21
Pcdhb20-201ENSMUST00000052179 Camsap1A2AHC3 1581 aa16.29■□□□□ 0.2
Pcdhb20-201ENSMUST00000052179 Mrc2Q64449 1479 aa16.26■□□□□ 0.19
Pcdhb20-201ENSMUST00000052179 Rapgef2Q8CHG7 1496 aa16.2■□□□□ 0.18
Pcdhb20-201ENSMUST00000052179 LrpprcQ6PB66 1392 aaKnown RBP16.18■□□□□ 0.18
Pcdhb20-201ENSMUST00000052179 PtprkP35822 1457 aa16.17■□□□□ 0.18
Pcdhb20-201ENSMUST00000052179 Grin2bQ01097 1482 aa16.15■□□□□ 0.18
Pcdhb20-201ENSMUST00000052179 Dhx29Q6PGC1 1365 aaKnown RBP16.14■□□□□ 0.17
Pcdhb20-201ENSMUST00000052179 Cep162Q6ZQ06 1403 aa16.14■□□□□ 0.17
Pcdhb20-201ENSMUST00000052179 Shroom4Q1W617 1475 aa16.09■□□□□ 0.17
Pcdhb20-201ENSMUST00000052179 Baz1bQ9Z277 1479 aa16.09■□□□□ 0.17
Pcdhb20-201ENSMUST00000052179 Kif21aQ9QXL2 1672 aa16.08■□□□□ 0.17
Pcdhb20-201ENSMUST00000052179 NrkQ9R0G8 1455 aa16.07■□□□□ 0.16
Pcdhb20-201ENSMUST00000052179 PogzQ8BZH4 1409 aaKnown RBP16.07■□□□□ 0.16
Pcdhb20-201ENSMUST00000052179 Duox2A2AQ99 1517 aa16.07■□□□□ 0.16
Pcdhb20-201ENSMUST00000052179 Efcab5A0JP43 1406 aa15.99■□□□□ 0.15
Pcdhb20-201ENSMUST00000052179 Ap3b1Q9Z1T1 1105 aa15.99■□□□□ 0.15
Pcdhb20-201ENSMUST00000052179 Arhgap35Q91YM2 1499 aa15.99■□□□□ 0.15
Pcdhb20-201ENSMUST00000052179 Crocc2F6XLV1 1638 aa15.98■□□□□ 0.15
Pcdhb20-201ENSMUST00000052179 Plb1Q3TTY0 1478 aa15.94■□□□□ 0.14
Pcdhb20-201ENSMUST00000052179 Rad54l2Q99NG0 1466 aa15.94■□□□□ 0.14
Pcdhb20-201ENSMUST00000052179 Urb2E9Q7L1 1524 aaKnown RBP15.92■□□□□ 0.14
Pcdhb20-201ENSMUST00000052179 Clip1Q922J3 1391 aa15.92■□□□□ 0.14
Pcdhb20-201ENSMUST00000052179 Samd9lQ69Z37 1561 aa15.92■□□□□ 0.14
Pcdhb20-201ENSMUST00000052179 Mroh2bQ7M6Y6 1581 aa15.9■□□□□ 0.14
Pcdhb20-201ENSMUST00000052179 Eif4g1Q6NZJ6 1600 aaKnown RBP15.87■□□□□ 0.13
Pcdhb20-201ENSMUST00000052179 Plekhg3Q4VAC9 1341 aa15.85■□□□□ 0.13
Pcdhb20-201ENSMUST00000052179 UbtfP25976 765 aaKnown RBP15.84■□□□□ 0.13
Pcdhb20-201ENSMUST00000052179 Lrriq1Q0P5X1 1673 aa15.84■□□□□ 0.13
Pcdhb20-201ENSMUST00000052179 Setd5Q5XJV7 1441 aa15.83■□□□□ 0.13
Pcdhb20-201ENSMUST00000052179 Map3k1P53349 1493 aa15.83■□□□□ 0.12
Pcdhb20-201ENSMUST00000052179 SynmQ70IV5 1561 aa15.81■□□□□ 0.12
Pcdhb20-201ENSMUST00000052179 Carmil1Q6EDY6 1374 aa15.8■□□□□ 0.12
Pcdhb20-201ENSMUST00000052179 Eea1Q8BL66 1411 aa15.8■□□□□ 0.12
Pcdhb20-201ENSMUST00000052179 Disp1Q3TDN0 1521 aa15.75■□□□□ 0.11
Pcdhb20-201ENSMUST00000052179 Ift140E9PY46 1464 aa15.74■□□□□ 0.11
Pcdhb20-201ENSMUST00000052179 Grin2aP35436 1464 aa15.73■□□□□ 0.11
Pcdhb20-201ENSMUST00000052179 Acin1Q9JIX8 1338 aaKnown RBP15.72■□□□□ 0.11
Pcdhb20-201ENSMUST00000052179 AqrQ8CFQ3 1481 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms