RNA–Protein interactions for RNA: ENSMUST00000046901.13

Pdgfa-201, Transcript of Platelet-derived growth factor subunit A, mousemouse

TSL 1 (best) BASIC

Gene Pdgfa, Length 1,543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfa-201ENSMUST00000046901 Gm35339A0A140LHH9 1649 aa40.04■■■■■ 4
Pdgfa-201ENSMUST00000046901 NischQ80TM9 1593 aa39.65■■■■□ 3.94
Pdgfa-201ENSMUST00000046901 Abcc9P70170 1546 aa38.39■■■■□ 3.74
Pdgfa-201ENSMUST00000046901 Abcc8B2RUS7 1588 aa38.27■■■■□ 3.72
Pdgfa-201ENSMUST00000046901 ScribQ80U72 1612 aa36.83■■■■□ 3.49
Pdgfa-201ENSMUST00000046901 Kdm5dQ62240 1548 aa35.66■■■■□ 3.3
Pdgfa-201ENSMUST00000046901 NacadQ5SWP3 1504 aa35.66■■■■□ 3.3
Pdgfa-201ENSMUST00000046901 Dcaf1Q80TR8 1506 aa35.2■■■■□ 3.23
Pdgfa-201ENSMUST00000046901 Sycp2Q9CUU3 1500 aa34.96■■■■□ 3.19
Pdgfa-201ENSMUST00000046901 Rb1cc1Q9ESK9 1588 aa34.59■■■■□ 3.13
Pdgfa-201ENSMUST00000046901 Rhox8Q6VSS7 320 aa34.53■■■■□ 3.12
Pdgfa-201ENSMUST00000046901 BicraF8VPZ9 1578 aa34.46■■■■□ 3.11
Pdgfa-201ENSMUST00000046901 Baz1aO88379 1555 aa34.09■■■■□ 3.05
Pdgfa-201ENSMUST00000046901 Ccdc180J3QNE4 1664 aa34■■■■□ 3.03
Pdgfa-201ENSMUST00000046901 Crybg2B7ZCC2 1516 aa33.85■■■■□ 3.01
Pdgfa-201ENSMUST00000046901 Zcchc6Q5BLK4 1491 aaKnown RBP33.63■■■□□ 2.97
Pdgfa-201ENSMUST00000046901 Pds5bQ4VA53 1446 aaKnown RBP33.44■■■□□ 2.94
Pdgfa-201ENSMUST00000046901 Dnajc5bQ9CQ94 199 aa33.32■■■□□ 2.92
Pdgfa-201ENSMUST00000046901 Atad2bE9Q166 1460 aaKnown RBP33.16■■■□□ 2.9
Pdgfa-201ENSMUST00000046901 Thoc2B1AZI6 1594 aaKnown RBP33.11■■■□□ 2.89
Pdgfa-201ENSMUST00000046901 Smarca2Q6DIC0 1577 aa33.1■■■□□ 2.89
Pdgfa-201ENSMUST00000046901 Cecr2E9Q2Z1 1453 aa32.98■■■□□ 2.87
Pdgfa-201ENSMUST00000046901 Smarca4Q3TKT4 1613 aaKnown RBP32.97■■■□□ 2.87
Pdgfa-201ENSMUST00000046901 Iqgap2Q3UQ44 1575 aa32.79■■■□□ 2.84
Pdgfa-201ENSMUST00000046901 Ercc6F8VPZ5 1481 aa32.78■■■□□ 2.84
Pdgfa-201ENSMUST00000046901 Rtl1Q7M732 1744 aa32.7■■■□□ 2.82
Pdgfa-201ENSMUST00000046901 Cc2d2aQ8CFW7 1633 aa32.61■■■□□ 2.81
Pdgfa-201ENSMUST00000046901 Wdr62Q3U3T8 1523 aa32.48■■■□□ 2.79
Pdgfa-201ENSMUST00000046901 Frmpd1A2AKB4 1549 aa32.43■■■□□ 2.78
Pdgfa-201ENSMUST00000046901 Fam135aQ6NS59 1506 aa32.39■■■□□ 2.78
Pdgfa-201ENSMUST00000046901 Ccdc136Q3TVA9 1136 aa32.28■■■□□ 2.76
Pdgfa-201ENSMUST00000046901 CftrP26361 1476 aa32.23■■■□□ 2.75
Pdgfa-201ENSMUST00000046901 Synj1Q8CHC4 1574 aa32.22■■■□□ 2.75
Pdgfa-201ENSMUST00000046901 Phldb1Q6PDH0 1371 aaKnown RBP32.19■■■□□ 2.74
Pdgfa-201ENSMUST00000046901 Cttnbp2B9EJA2 1648 aa32.18■■■□□ 2.74
Pdgfa-201ENSMUST00000046901 Brd4Q9ESU6 1400 aaKnown RBP32.18■■■□□ 2.74
Pdgfa-201ENSMUST00000046901 Unc13aQ4KUS2 1712 aa31.99■■■□□ 2.71
Pdgfa-201ENSMUST00000046901 Ubl4bQ9CQ84 188 aa31.93■■■□□ 2.7
Pdgfa-201ENSMUST00000046901 Baz1bQ9Z277 1479 aa31.91■■■□□ 2.7
Pdgfa-201ENSMUST00000046901 Esf1Q3V1V3 845 aaKnown RBP31.73■■■□□ 2.67
Pdgfa-201ENSMUST00000046901 Trim41Q5NCC3 630 aa31.71■■■□□ 2.67
Pdgfa-201ENSMUST00000046901 Mrc2Q64449 1479 aa31.65■■■□□ 2.66
Pdgfa-201ENSMUST00000046901 Rsf1E9PWW9 1441 aaKnown RBP31.41■■■□□ 2.62
Pdgfa-201ENSMUST00000046901 Kif15Q6P9L6 1387 aa31.37■■■□□ 2.61
Pdgfa-201ENSMUST00000046901 Cux2P70298 1426 aa31.29■■■□□ 2.6
Pdgfa-201ENSMUST00000046901 Lamc3Q9R0B6 1581 aa31.24■■■□□ 2.59
Pdgfa-201ENSMUST00000046901 Golga3P55937 1487 aa31.14■■■□□ 2.58
Pdgfa-201ENSMUST00000046901 Cngb1E1AZ71 1325 aa31.09■■■□□ 2.57
Pdgfa-201ENSMUST00000046901 Top2bQ64511 1612 aa31.07■■■□□ 2.56
Pdgfa-201ENSMUST00000046901 Kif21aQ9QXL2 1672 aa31.01■■■□□ 2.56
Pdgfa-201ENSMUST00000046901 Npm1Q61937 292 aaKnown RBP30.97■■■□□ 2.55
Pdgfa-201ENSMUST00000046901 Lrriq1Q0P5X1 1673 aa30.95■■■□□ 2.55
Pdgfa-201ENSMUST00000046901 TnnQ80Z71 1560 aa30.95■■■□□ 2.55
Pdgfa-201ENSMUST00000046901 Cep164Q5DU05 1446 aa30.87■■■□□ 2.53
Pdgfa-201ENSMUST00000046901 Il27Q8K3I6 234 aa30.81■■■□□ 2.52
Pdgfa-201ENSMUST00000046901 Ccdc18Q640L5 1455 aa30.78■■■□□ 2.52
Pdgfa-201ENSMUST00000046901 Fmn1Q05860 1466 aa30.74■■■□□ 2.51
Pdgfa-201ENSMUST00000046901 Camsap1A2AHC3 1581 aa30.72■■■□□ 2.51
Pdgfa-201ENSMUST00000046901 Dhx29Q6PGC1 1365 aaKnown RBP30.65■■■□□ 2.5
Pdgfa-201ENSMUST00000046901 LrpprcQ6PB66 1392 aaKnown RBP30.6■■■□□ 2.49
Pdgfa-201ENSMUST00000046901 Urb2E9Q7L1 1524 aaKnown RBP30.55■■■□□ 2.48
Pdgfa-201ENSMUST00000046901 Plb1Q3TTY0 1478 aa30.51■■■□□ 2.48
Pdgfa-201ENSMUST00000046901 Eif4g3Q80XI3 1579 aaKnown RBP30.5■■■□□ 2.47
Pdgfa-201ENSMUST00000046901 Crocc2F6XLV1 1638 aa30.49■■■□□ 2.47
Pdgfa-201ENSMUST00000046901 PogzQ8BZH4 1409 aaKnown RBP30.44■■■□□ 2.46
Pdgfa-201ENSMUST00000046901 Ccdc88bQ4QRL3 1481 aa30.39■■■□□ 2.46
Pdgfa-201ENSMUST00000046901 Grin2bQ01097 1482 aa30.32■■■□□ 2.44
Pdgfa-201ENSMUST00000046901 Duox2A2AQ99 1517 aa30.31■■■□□ 2.44
Pdgfa-201ENSMUST00000046901 Ift140E9PY46 1464 aa30.22■■■□□ 2.43
Pdgfa-201ENSMUST00000046901 Chic1Q8CBW7 227 aa30.21■■■□□ 2.43
Pdgfa-201ENSMUST00000046901 Top2aQ01320 1528 aaKnown RBP30.19■■■□□ 2.42
Pdgfa-201ENSMUST00000046901 Rusc2Q80U22 1514 aa30.1■■■□□ 2.41
Pdgfa-201ENSMUST00000046901 Samd9lQ69Z37 1561 aa30.1■■■□□ 2.41
Pdgfa-201ENSMUST00000046901 Efcab5A0JP43 1406 aa30.07■■■□□ 2.4
Pdgfa-201ENSMUST00000046901 Disp1Q3TDN0 1521 aa30.05■■■□□ 2.4
Pdgfa-201ENSMUST00000046901 NrkQ9R0G8 1455 aa30■■■□□ 2.39
Pdgfa-201ENSMUST00000046901 Shroom2A2ALU4 1481 aa29.98■■■□□ 2.39
Pdgfa-201ENSMUST00000046901 Rad54l2Q99NG0 1466 aa29.92■■■□□ 2.38
Pdgfa-201ENSMUST00000046901 PtprkP35822 1457 aa29.91■■■□□ 2.38
Pdgfa-201ENSMUST00000046901 Dnajc5P60904 198 aa29.91■■■□□ 2.38
Pdgfa-201ENSMUST00000046901 Shroom4Q1W617 1475 aa29.91■■■□□ 2.38
Pdgfa-201ENSMUST00000046901 Nup160Q9Z0W3 1402 aaKnown RBP29.9■■■□□ 2.38
Pdgfa-201ENSMUST00000046901 Pbrm1Q8BSQ9 1634 aaKnown RBP29.89■■■□□ 2.38
Pdgfa-201ENSMUST00000046901 Cc2d2bA0A286YDU8 1405 aa29.83■■■□□ 2.37
Pdgfa-201ENSMUST00000046901 Setd1bQ8CFT2 1985 aa29.83■■■□□ 2.37
Pdgfa-201ENSMUST00000046901 Magi3Q9EQJ9 1476 aa29.8■■■□□ 2.36
Pdgfa-201ENSMUST00000046901 Grin2aP35436 1464 aa29.79■■■□□ 2.36
Pdgfa-201ENSMUST00000046901 Pabpn1Q8CCS6 302 aaKnown RBP29.76■■■□□ 2.36
Pdgfa-201ENSMUST00000046901 SynmQ70IV5 1561 aa29.7■■■□□ 2.34
Pdgfa-201ENSMUST00000046901 Pelp1Q9DBD5 1123 aaKnown RBP29.69■■■□□ 2.34
Pdgfa-201ENSMUST00000046901 Zeb1Q64318 1117 aa29.67■■■□□ 2.34
Pdgfa-201ENSMUST00000046901 AqrQ8CFQ3 1481 aaKnown RBP29.67■■■□□ 2.34
Pdgfa-201ENSMUST00000046901 Pla2r1Q62028 1487 aa29.65■■■□□ 2.34
Pdgfa-201ENSMUST00000046901 HrcG5E8J6 738 aa29.65■■■□□ 2.34
Pdgfa-201ENSMUST00000046901 Npm2Q80W85 207 aa29.61■■■□□ 2.33
Pdgfa-201ENSMUST00000046901 Col17a1Q07563 1470 aa29.56■■■□□ 2.32
Pdgfa-201ENSMUST00000046901 Gpatch8A2A6A1 1505 aa29.54■■■□□ 2.32
Pdgfa-201ENSMUST00000046901 Gab3Q8BSM5 595 aa29.54■■■□□ 2.32
Pdgfa-201ENSMUST00000046901 Fgd6Q69ZL1 1399 aa29.51■■■□□ 2.31
Pdgfa-201ENSMUST00000046901 Mroh2bQ7M6Y6 1581 aa29.5■■■□□ 2.31
Retrieved 100 of 22,080 RNA–protein pairs in 107.4 ms