RNA–Protein interactions for RNA: ENSMUST00000046506.6

Clcf1-201, Transcript of Cardiotrophin-like cytokine factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcf1, Length 1,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1-201ENSMUST00000046506 Gm35339A0A140LHH9 1649 aa29.24■■■□□ 2.27
Clcf1-201ENSMUST00000046506 NischQ80TM9 1593 aa29.09■■■□□ 2.25
Clcf1-201ENSMUST00000046506 Abcc9P70170 1546 aa28.25■■■□□ 2.11
Clcf1-201ENSMUST00000046506 Abcc8B2RUS7 1588 aa27.94■■■□□ 2.06
Clcf1-201ENSMUST00000046506 ScribQ80U72 1612 aa26.49■■□□□ 1.83
Clcf1-201ENSMUST00000046506 Dcaf1Q80TR8 1506 aa26.04■■□□□ 1.76
Clcf1-201ENSMUST00000046506 NacadQ5SWP3 1504 aa25.79■■□□□ 1.72
Clcf1-201ENSMUST00000046506 Kdm5dQ62240 1548 aa25.78■■□□□ 1.72
Clcf1-201ENSMUST00000046506 Rhox8Q6VSS7 320 aa25.67■■□□□ 1.7
Clcf1-201ENSMUST00000046506 Rb1cc1Q9ESK9 1588 aa25.39■■□□□ 1.65
Clcf1-201ENSMUST00000046506 Ccdc180J3QNE4 1664 aa25.32■■□□□ 1.64
Clcf1-201ENSMUST00000046506 Sycp2Q9CUU3 1500 aa25.24■■□□□ 1.63
Clcf1-201ENSMUST00000046506 Baz1aO88379 1555 aa25.13■■□□□ 1.61
Clcf1-201ENSMUST00000046506 Crybg2B7ZCC2 1516 aa25.03■■□□□ 1.6
Clcf1-201ENSMUST00000046506 Rtl1Q7M732 1744 aa24.78■■□□□ 1.56
Clcf1-201ENSMUST00000046506 BicraF8VPZ9 1578 aa24.75■■□□□ 1.55
Clcf1-201ENSMUST00000046506 Zcchc6Q5BLK4 1491 aaKnown RBP24.54■■□□□ 1.52
Clcf1-201ENSMUST00000046506 Smarca2Q6DIC0 1577 aa24.48■■□□□ 1.51
Clcf1-201ENSMUST00000046506 Cecr2E9Q2Z1 1453 aa24.04■■□□□ 1.44
Clcf1-201ENSMUST00000046506 Pds5bQ4VA53 1446 aaKnown RBP23.93■■□□□ 1.42
Clcf1-201ENSMUST00000046506 Smarca4Q3TKT4 1613 aaKnown RBP23.93■■□□□ 1.42
Clcf1-201ENSMUST00000046506 Ccdc136Q3TVA9 1136 aa23.91■■□□□ 1.42
Clcf1-201ENSMUST00000046506 Atad2bE9Q166 1460 aaKnown RBP23.87■■□□□ 1.41
Clcf1-201ENSMUST00000046506 Brd4Q9ESU6 1400 aaKnown RBP23.83■■□□□ 1.41
Clcf1-201ENSMUST00000046506 Trim41Q5NCC3 630 aa23.72■■□□□ 1.39
Clcf1-201ENSMUST00000046506 Iqgap2Q3UQ44 1575 aa23.68■■□□□ 1.38
Clcf1-201ENSMUST00000046506 CftrP26361 1476 aa23.67■■□□□ 1.38
Clcf1-201ENSMUST00000046506 Synj1Q8CHC4 1574 aa23.65■■□□□ 1.38
Clcf1-201ENSMUST00000046506 Cttnbp2B9EJA2 1648 aa23.63■■□□□ 1.37
Clcf1-201ENSMUST00000046506 Thoc2B1AZI6 1594 aaKnown RBP23.45■■□□□ 1.34
Clcf1-201ENSMUST00000046506 Ercc6F8VPZ5 1481 aa23.4■■□□□ 1.34
Clcf1-201ENSMUST00000046506 Wdr62Q3U3T8 1523 aa23.39■■□□□ 1.33
Clcf1-201ENSMUST00000046506 Frmpd1A2AKB4 1549 aa23.34■■□□□ 1.33
Clcf1-201ENSMUST00000046506 Golga3P55937 1487 aa23.23■■□□□ 1.31
Clcf1-201ENSMUST00000046506 Esf1Q3V1V3 845 aaKnown RBP23.17■■□□□ 1.3
Clcf1-201ENSMUST00000046506 Top2bQ64511 1612 aa23.13■■□□□ 1.29
Clcf1-201ENSMUST00000046506 Fam135aQ6NS59 1506 aa23.08■■□□□ 1.29
Clcf1-201ENSMUST00000046506 HrcG5E8J6 738 aa23.08■■□□□ 1.29
Clcf1-201ENSMUST00000046506 Phldb1Q6PDH0 1371 aaKnown RBP23.06■■□□□ 1.28
Clcf1-201ENSMUST00000046506 Cc2d2aQ8CFW7 1633 aa23.06■■□□□ 1.28
Clcf1-201ENSMUST00000046506 Unc13aQ4KUS2 1712 aa23.03■■□□□ 1.28
Clcf1-201ENSMUST00000046506 Cngb1E1AZ71 1325 aa22.96■■□□□ 1.27
Clcf1-201ENSMUST00000046506 Baz1bQ9Z277 1479 aa22.95■■□□□ 1.27
Clcf1-201ENSMUST00000046506 Dnajc5bQ9CQ94 199 aa22.9■■□□□ 1.26
Clcf1-201ENSMUST00000046506 Rsf1E9PWW9 1441 aaKnown RBP22.84■■□□□ 1.25
Clcf1-201ENSMUST00000046506 Lamc3Q9R0B6 1581 aa22.84■■□□□ 1.25
Clcf1-201ENSMUST00000046506 Fmn1Q05860 1466 aa22.83■■□□□ 1.25
Clcf1-201ENSMUST00000046506 TnnQ80Z71 1560 aa22.8■■□□□ 1.24
Clcf1-201ENSMUST00000046506 Ubl4bQ9CQ84 188 aa22.74■■□□□ 1.23
Clcf1-201ENSMUST00000046506 Ccdc88bQ4QRL3 1481 aa22.74■■□□□ 1.23
Clcf1-201ENSMUST00000046506 Kif15Q6P9L6 1387 aa22.7■■□□□ 1.22
Clcf1-201ENSMUST00000046506 Cep164Q5DU05 1446 aa22.69■■□□□ 1.22
Clcf1-201ENSMUST00000046506 Chic1Q8CBW7 227 aa22.63■■□□□ 1.21
Clcf1-201ENSMUST00000046506 Rpgrip1Q9EPQ2 1331 aa22.57■■□□□ 1.2
Clcf1-201ENSMUST00000046506 Top2aQ01320 1528 aaKnown RBP22.53■■□□□ 1.2
Clcf1-201ENSMUST00000046506 Cux2P70298 1426 aa22.53■■□□□ 1.2
Clcf1-201ENSMUST00000046506 Mrc2Q64449 1479 aa22.51■■□□□ 1.19
Clcf1-201ENSMUST00000046506 Camsap1A2AHC3 1581 aa22.48■■□□□ 1.19
Clcf1-201ENSMUST00000046506 Ccdc18Q640L5 1455 aa22.46■■□□□ 1.19
Clcf1-201ENSMUST00000046506 Npm1Q61937 292 aaKnown RBP22.33■■□□□ 1.16
Clcf1-201ENSMUST00000046506 Grin2bQ01097 1482 aa22.25■■□□□ 1.15
Clcf1-201ENSMUST00000046506 LrpprcQ6PB66 1392 aaKnown RBP22.24■■□□□ 1.15
Clcf1-201ENSMUST00000046506 NrkQ9R0G8 1455 aa22.23■■□□□ 1.15
Clcf1-201ENSMUST00000046506 Il27Q8K3I6 234 aa22.22■■□□□ 1.15
Clcf1-201ENSMUST00000046506 Kif21aQ9QXL2 1672 aa22.19■■□□□ 1.14
Clcf1-201ENSMUST00000046506 PogzQ8BZH4 1409 aaKnown RBP22.17■■□□□ 1.14
Clcf1-201ENSMUST00000046506 Rapgef2Q8CHG7 1496 aa22.16■■□□□ 1.14
Clcf1-201ENSMUST00000046506 Dhx29Q6PGC1 1365 aaKnown RBP22.12■■□□□ 1.13
Clcf1-201ENSMUST00000046506 Shroom4Q1W617 1475 aa22.11■■□□□ 1.13
Clcf1-201ENSMUST00000046506 Efcab5A0JP43 1406 aa22.11■■□□□ 1.13
Clcf1-201ENSMUST00000046506 Gab3Q8BSM5 595 aa22.1■■□□□ 1.13
Clcf1-201ENSMUST00000046506 Acin1Q9JIX8 1338 aaKnown RBP22.1■■□□□ 1.13
Clcf1-201ENSMUST00000046506 Duox2A2AQ99 1517 aa22.07■■□□□ 1.12
Clcf1-201ENSMUST00000046506 PtprkP35822 1457 aa22.06■■□□□ 1.12
Clcf1-201ENSMUST00000046506 Crocc2F6XLV1 1638 aa22.03■■□□□ 1.12
Clcf1-201ENSMUST00000046506 Eif4g1Q6NZJ6 1600 aaKnown RBP21.98■■□□□ 1.11
Clcf1-201ENSMUST00000046506 Cep162Q6ZQ06 1403 aa21.97■■□□□ 1.11
Clcf1-201ENSMUST00000046506 Lrriq1Q0P5X1 1673 aa21.94■■□□□ 1.1
Clcf1-201ENSMUST00000046506 Npm2Q80W85 207 aa21.9■■□□□ 1.1
Clcf1-201ENSMUST00000046506 Urb2E9Q7L1 1524 aaKnown RBP21.9■■□□□ 1.1
Clcf1-201ENSMUST00000046506 Plb1Q3TTY0 1478 aa21.9■■□□□ 1.1
Clcf1-201ENSMUST00000046506 Map3k1P53349 1493 aa21.89■■□□□ 1.09
Clcf1-201ENSMUST00000046506 Samd9lQ69Z37 1561 aa21.88■■□□□ 1.09
Clcf1-201ENSMUST00000046506 Arhgap35Q91YM2 1499 aa21.87■■□□□ 1.09
Clcf1-201ENSMUST00000046506 Mroh2bQ7M6Y6 1581 aa21.86■■□□□ 1.09
Clcf1-201ENSMUST00000046506 Ift140E9PY46 1464 aa21.8■■□□□ 1.08
Clcf1-201ENSMUST00000046506 SynmQ70IV5 1561 aa21.78■■□□□ 1.08
Clcf1-201ENSMUST00000046506 AqrQ8CFQ3 1481 aaKnown RBP21.76■■□□□ 1.07
Clcf1-201ENSMUST00000046506 Disp1Q3TDN0 1521 aa21.75■■□□□ 1.07
Clcf1-201ENSMUST00000046506 Pbrm1Q8BSQ9 1634 aaKnown RBP21.71■■□□□ 1.07
Clcf1-201ENSMUST00000046506 Gpatch8A2A6A1 1505 aa21.69■■□□□ 1.06
Clcf1-201ENSMUST00000046506 Rad54l2Q99NG0 1466 aa21.69■■□□□ 1.06
Clcf1-201ENSMUST00000046506 Ehmt2Q9Z148 1263 aaKnown RBP21.69■■□□□ 1.06
Clcf1-201ENSMUST00000046506 Magi3Q9EQJ9 1476 aa21.67■■□□□ 1.06
Clcf1-201ENSMUST00000046506 Eif4g3Q80XI3 1579 aaKnown RBP21.67■■□□□ 1.06
Clcf1-201ENSMUST00000046506 Carmil1Q6EDY6 1374 aa21.67■■□□□ 1.06
Clcf1-201ENSMUST00000046506 Zeb1Q64318 1117 aa21.66■■□□□ 1.06
Clcf1-201ENSMUST00000046506 Clip1Q922J3 1391 aa21.66■■□□□ 1.06
Clcf1-201ENSMUST00000046506 Nup160Q9Z0W3 1402 aaKnown RBP21.65■■□□□ 1.06
Clcf1-201ENSMUST00000046506 Grin2aP35436 1464 aa21.63■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms