RNA–Protein interactions for RNA: ENSMUST00000041012.8

Ptcra-201, Transcript of Pre T-cell antigen receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcra, Length 1,283 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcra-201ENSMUST00000041012 Gm35339A0A140LHH9 1649 aa37.39■■■■□ 3.58
Ptcra-201ENSMUST00000041012 NischQ80TM9 1593 aa36.98■■■■□ 3.51
Ptcra-201ENSMUST00000041012 Abcc9P70170 1546 aa35.84■■■■□ 3.33
Ptcra-201ENSMUST00000041012 Abcc8B2RUS7 1588 aa35.71■■■■□ 3.31
Ptcra-201ENSMUST00000041012 ScribQ80U72 1612 aa34.27■■■■□ 3.08
Ptcra-201ENSMUST00000041012 NacadQ5SWP3 1504 aa33.25■■■□□ 2.91
Ptcra-201ENSMUST00000041012 Kdm5dQ62240 1548 aa33.21■■■□□ 2.91
Ptcra-201ENSMUST00000041012 Dcaf1Q80TR8 1506 aa32.97■■■□□ 2.87
Ptcra-201ENSMUST00000041012 Sycp2Q9CUU3 1500 aa32.58■■■□□ 2.81
Ptcra-201ENSMUST00000041012 Rb1cc1Q9ESK9 1588 aa32.25■■■□□ 2.75
Ptcra-201ENSMUST00000041012 Rhox8Q6VSS7 320 aa32.1■■■□□ 2.73
Ptcra-201ENSMUST00000041012 BicraF8VPZ9 1578 aa32.07■■■□□ 2.72
Ptcra-201ENSMUST00000041012 Ccdc180J3QNE4 1664 aa31.84■■■□□ 2.69
Ptcra-201ENSMUST00000041012 Baz1aO88379 1555 aa31.82■■■□□ 2.68
Ptcra-201ENSMUST00000041012 Crybg2B7ZCC2 1516 aa31.7■■■□□ 2.67
Ptcra-201ENSMUST00000041012 Zcchc6Q5BLK4 1491 aaKnown RBP31.29■■■□□ 2.6
Ptcra-201ENSMUST00000041012 Pds5bQ4VA53 1446 aaKnown RBP31.15■■■□□ 2.58
Ptcra-201ENSMUST00000041012 Smarca2Q6DIC0 1577 aa30.93■■■□□ 2.54
Ptcra-201ENSMUST00000041012 Atad2bE9Q166 1460 aaKnown RBP30.91■■■□□ 2.54
Ptcra-201ENSMUST00000041012 Thoc2B1AZI6 1594 aaKnown RBP30.79■■■□□ 2.52
Ptcra-201ENSMUST00000041012 Dnajc5bQ9CQ94 199 aa30.78■■■□□ 2.52
Ptcra-201ENSMUST00000041012 Smarca4Q3TKT4 1613 aaKnown RBP30.73■■■□□ 2.51
Ptcra-201ENSMUST00000041012 Cecr2E9Q2Z1 1453 aa30.7■■■□□ 2.5
Ptcra-201ENSMUST00000041012 Rtl1Q7M732 1744 aa30.54■■■□□ 2.48
Ptcra-201ENSMUST00000041012 Iqgap2Q3UQ44 1575 aa30.54■■■□□ 2.48
Ptcra-201ENSMUST00000041012 Ercc6F8VPZ5 1481 aa30.49■■■□□ 2.47
Ptcra-201ENSMUST00000041012 Cc2d2aQ8CFW7 1633 aa30.27■■■□□ 2.44
Ptcra-201ENSMUST00000041012 Wdr62Q3U3T8 1523 aa30.25■■■□□ 2.43
Ptcra-201ENSMUST00000041012 Frmpd1A2AKB4 1549 aa30.19■■■□□ 2.42
Ptcra-201ENSMUST00000041012 Fam135aQ6NS59 1506 aa30.17■■■□□ 2.42
Ptcra-201ENSMUST00000041012 CftrP26361 1476 aa30.09■■■□□ 2.41
Ptcra-201ENSMUST00000041012 Brd4Q9ESU6 1400 aaKnown RBP30.08■■■□□ 2.41
Ptcra-201ENSMUST00000041012 Cttnbp2B9EJA2 1648 aa30.03■■■□□ 2.4
Ptcra-201ENSMUST00000041012 Synj1Q8CHC4 1574 aa30.02■■■□□ 2.4
Ptcra-201ENSMUST00000041012 Ccdc136Q3TVA9 1136 aa30■■■□□ 2.39
Ptcra-201ENSMUST00000041012 Phldb1Q6PDH0 1371 aaKnown RBP29.98■■■□□ 2.39
Ptcra-201ENSMUST00000041012 Baz1bQ9Z277 1479 aa29.88■■■□□ 2.37
Ptcra-201ENSMUST00000041012 Unc13aQ4KUS2 1712 aa29.71■■■□□ 2.35
Ptcra-201ENSMUST00000041012 Ubl4bQ9CQ84 188 aa29.63■■■□□ 2.33
Ptcra-201ENSMUST00000041012 Trim41Q5NCC3 630 aa29.61■■■□□ 2.33
Ptcra-201ENSMUST00000041012 Esf1Q3V1V3 845 aaKnown RBP29.47■■■□□ 2.31
Ptcra-201ENSMUST00000041012 Mrc2Q64449 1479 aa29.44■■■□□ 2.3
Ptcra-201ENSMUST00000041012 Rsf1E9PWW9 1441 aaKnown RBP29.28■■■□□ 2.28
Ptcra-201ENSMUST00000041012 Kif15Q6P9L6 1387 aa29.18■■■□□ 2.26
Ptcra-201ENSMUST00000041012 Lamc3Q9R0B6 1581 aa29.14■■■□□ 2.26
Ptcra-201ENSMUST00000041012 Cux2P70298 1426 aa29.11■■■□□ 2.25
Ptcra-201ENSMUST00000041012 Golga3P55937 1487 aa29.1■■■□□ 2.25
Ptcra-201ENSMUST00000041012 Top2bQ64511 1612 aa29.02■■■□□ 2.24
Ptcra-201ENSMUST00000041012 TnnQ80Z71 1560 aa28.9■■■□□ 2.22
Ptcra-201ENSMUST00000041012 Cngb1E1AZ71 1325 aa28.88■■■□□ 2.21
Ptcra-201ENSMUST00000041012 Kif21aQ9QXL2 1672 aa28.8■■■□□ 2.2
Ptcra-201ENSMUST00000041012 Npm1Q61937 292 aaKnown RBP28.79■■■□□ 2.2
Ptcra-201ENSMUST00000041012 Cep164Q5DU05 1446 aa28.75■■■□□ 2.19
Ptcra-201ENSMUST00000041012 Lrriq1Q0P5X1 1673 aa28.74■■■□□ 2.19
Ptcra-201ENSMUST00000041012 Fmn1Q05860 1466 aa28.72■■■□□ 2.19
Ptcra-201ENSMUST00000041012 Ccdc18Q640L5 1455 aa28.71■■■□□ 2.19
Ptcra-201ENSMUST00000041012 Camsap1A2AHC3 1581 aa28.64■■■□□ 2.18
Ptcra-201ENSMUST00000041012 Il27Q8K3I6 234 aa28.54■■■□□ 2.16
Ptcra-201ENSMUST00000041012 Dhx29Q6PGC1 1365 aaKnown RBP28.53■■■□□ 2.16
Ptcra-201ENSMUST00000041012 LrpprcQ6PB66 1392 aaKnown RBP28.52■■■□□ 2.16
Ptcra-201ENSMUST00000041012 Urb2E9Q7L1 1524 aaKnown RBP28.4■■■□□ 2.14
Ptcra-201ENSMUST00000041012 PogzQ8BZH4 1409 aaKnown RBP28.39■■■□□ 2.14
Ptcra-201ENSMUST00000041012 Crocc2F6XLV1 1638 aa28.38■■■□□ 2.13
Ptcra-201ENSMUST00000041012 Plb1Q3TTY0 1478 aa28.37■■■□□ 2.13
Ptcra-201ENSMUST00000041012 Eif4g3Q80XI3 1579 aaKnown RBP28.37■■■□□ 2.13
Ptcra-201ENSMUST00000041012 Ccdc88bQ4QRL3 1481 aa28.34■■■□□ 2.13
Ptcra-201ENSMUST00000041012 Grin2bQ01097 1482 aa28.28■■■□□ 2.12
Ptcra-201ENSMUST00000041012 Duox2A2AQ99 1517 aa28.24■■■□□ 2.11
Ptcra-201ENSMUST00000041012 Top2aQ01320 1528 aaKnown RBP28.21■■■□□ 2.11
Ptcra-201ENSMUST00000041012 Ift140E9PY46 1464 aa28.17■■■□□ 2.1
Ptcra-201ENSMUST00000041012 Chic1Q8CBW7 227 aa28.12■■■□□ 2.09
Ptcra-201ENSMUST00000041012 Efcab5A0JP43 1406 aa28.1■■■□□ 2.09
Ptcra-201ENSMUST00000041012 NrkQ9R0G8 1455 aa28.04■■■□□ 2.08
Ptcra-201ENSMUST00000041012 Samd9lQ69Z37 1561 aa28.03■■■□□ 2.08
Ptcra-201ENSMUST00000041012 Rusc2Q80U22 1514 aa28.01■■■□□ 2.07
Ptcra-201ENSMUST00000041012 Disp1Q3TDN0 1521 aa28■■■□□ 2.07
Ptcra-201ENSMUST00000041012 Shroom2A2ALU4 1481 aa27.91■■■□□ 2.06
Ptcra-201ENSMUST00000041012 Shroom4Q1W617 1475 aa27.91■■■□□ 2.06
Ptcra-201ENSMUST00000041012 Nup160Q9Z0W3 1402 aaKnown RBP27.89■■■□□ 2.06
Ptcra-201ENSMUST00000041012 Pbrm1Q8BSQ9 1634 aaKnown RBP27.89■■■□□ 2.05
Ptcra-201ENSMUST00000041012 PtprkP35822 1457 aa27.87■■■□□ 2.05
Ptcra-201ENSMUST00000041012 HrcG5E8J6 738 aa27.83■■■□□ 2.05
Ptcra-201ENSMUST00000041012 Cc2d2bA0A286YDU8 1405 aa27.83■■■□□ 2.05
Ptcra-201ENSMUST00000041012 Rad54l2Q99NG0 1466 aa27.8■■■□□ 2.04
Ptcra-201ENSMUST00000041012 Magi3Q9EQJ9 1476 aa27.76■■■□□ 2.04
Ptcra-201ENSMUST00000041012 Grin2aP35436 1464 aa27.75■■■□□ 2.03
Ptcra-201ENSMUST00000041012 Setd1bQ8CFT2 1985 aa27.72■■■□□ 2.03
Ptcra-201ENSMUST00000041012 SynmQ70IV5 1561 aa27.69■■■□□ 2.02
Ptcra-201ENSMUST00000041012 Gpatch8A2A6A1 1505 aa27.67■■■□□ 2.02
Ptcra-201ENSMUST00000041012 AqrQ8CFQ3 1481 aaKnown RBP27.64■■■□□ 2.02
Ptcra-201ENSMUST00000041012 Dnajc5P60904 198 aa27.64■■■□□ 2.02
Ptcra-201ENSMUST00000041012 Pla2r1Q62028 1487 aa27.63■■■□□ 2.01
Ptcra-201ENSMUST00000041012 Pabpn1Q8CCS6 302 aaKnown RBP27.62■■■□□ 2.01
Ptcra-201ENSMUST00000041012 Mroh2bQ7M6Y6 1581 aa27.55■■■□□ 2
Ptcra-201ENSMUST00000041012 Zeb1Q64318 1117 aa27.54■■■□□ 2
Ptcra-201ENSMUST00000041012 Npm2Q80W85 207 aa27.53■■■□□ 2
Ptcra-201ENSMUST00000041012 Fgd6Q69ZL1 1399 aa27.48■■□□□ 1.99
Ptcra-201ENSMUST00000041012 Rapgef2Q8CHG7 1496 aa27.45■■□□□ 1.99
Ptcra-201ENSMUST00000041012 Pelp1Q9DBD5 1123 aaKnown RBP27.44■■□□□ 1.98
Ptcra-201ENSMUST00000041012 Col17a1Q07563 1470 aa27.44■■□□□ 1.98
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms