RNA–Protein interactions for RNA: ENSMUST00000040607.5

Lsm3-201, Transcript of U6 snRNA-associated Sm-like protein LSm3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lsm3, Length 743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3-201ENSMUST00000040607 Gm35339A0A140LHH9 1649 aa24.49■■□□□ 1.51
Lsm3-201ENSMUST00000040607 NischQ80TM9 1593 aa24.05■■□□□ 1.44
Lsm3-201ENSMUST00000040607 Abcc8B2RUS7 1588 aa23.35■■□□□ 1.33
Lsm3-201ENSMUST00000040607 Abcc9P70170 1546 aa23.32■■□□□ 1.32
Lsm3-201ENSMUST00000040607 ScribQ80U72 1612 aa22.71■■□□□ 1.23
Lsm3-201ENSMUST00000040607 NacadQ5SWP3 1504 aa22.03■■□□□ 1.12
Lsm3-201ENSMUST00000040607 Kdm5dQ62240 1548 aa21.89■■□□□ 1.09
Lsm3-201ENSMUST00000040607 Sycp2Q9CUU3 1500 aa21.6■■□□□ 1.05
Lsm3-201ENSMUST00000040607 Dnajc5bQ9CQ94 199 aa21.43■■□□□ 1.02
Lsm3-201ENSMUST00000040607 Dcaf1Q80TR8 1506 aa21.36■■□□□ 1.01
Lsm3-201ENSMUST00000040607 BicraF8VPZ9 1578 aa21.33■■□□□ 1.01
Lsm3-201ENSMUST00000040607 Pds5bQ4VA53 1446 aaKnown RBP20.92■□□□□ 0.94
Lsm3-201ENSMUST00000040607 Rb1cc1Q9ESK9 1588 aa20.9■□□□□ 0.94
Lsm3-201ENSMUST00000040607 Thoc2B1AZI6 1594 aaKnown RBP20.8■□□□□ 0.92
Lsm3-201ENSMUST00000040607 Crybg2B7ZCC2 1516 aa20.64■□□□□ 0.9
Lsm3-201ENSMUST00000040607 Atad2bE9Q166 1460 aaKnown RBP20.62■□□□□ 0.89
Lsm3-201ENSMUST00000040607 Baz1aO88379 1555 aa20.59■□□□□ 0.89
Lsm3-201ENSMUST00000040607 Ccdc180J3QNE4 1664 aa20.54■□□□□ 0.88
Lsm3-201ENSMUST00000040607 Cc2d2aQ8CFW7 1633 aa20.49■□□□□ 0.87
Lsm3-201ENSMUST00000040607 Rhox8Q6VSS7 320 aa20.49■□□□□ 0.87
Lsm3-201ENSMUST00000040607 Ercc6F8VPZ5 1481 aa20.44■□□□□ 0.86
Lsm3-201ENSMUST00000040607 Zcchc6Q5BLK4 1491 aaKnown RBP20.39■□□□□ 0.85
Lsm3-201ENSMUST00000040607 Smarca2Q6DIC0 1577 aa20.31■□□□□ 0.84
Lsm3-201ENSMUST00000040607 Fam135aQ6NS59 1506 aa20.26■□□□□ 0.83
Lsm3-201ENSMUST00000040607 Smarca4Q3TKT4 1613 aaKnown RBP20.24■□□□□ 0.83
Lsm3-201ENSMUST00000040607 Iqgap2Q3UQ44 1575 aa20.19■□□□□ 0.82
Lsm3-201ENSMUST00000040607 Phldb1Q6PDH0 1371 aaKnown RBP20.13■□□□□ 0.81
Lsm3-201ENSMUST00000040607 Baz1bQ9Z277 1479 aa20.11■□□□□ 0.81
Lsm3-201ENSMUST00000040607 Frmpd1A2AKB4 1549 aa20.07■□□□□ 0.8
Lsm3-201ENSMUST00000040607 Wdr62Q3U3T8 1523 aa20.07■□□□□ 0.8
Lsm3-201ENSMUST00000040607 Cecr2E9Q2Z1 1453 aa20.05■□□□□ 0.8
Lsm3-201ENSMUST00000040607 Ubl4bQ9CQ84 188 aa20.02■□□□□ 0.8
Lsm3-201ENSMUST00000040607 Dnajc5P60904 198 aa19.9■□□□□ 0.78
Lsm3-201ENSMUST00000040607 Mrc2Q64449 1479 aa19.83■□□□□ 0.76
Lsm3-201ENSMUST00000040607 Unc13aQ4KUS2 1712 aa19.74■□□□□ 0.75
Lsm3-201ENSMUST00000040607 Trim41Q5NCC3 630 aa19.7■□□□□ 0.74
Lsm3-201ENSMUST00000040607 CftrP26361 1476 aa19.54■□□□□ 0.72
Lsm3-201ENSMUST00000040607 Cttnbp2B9EJA2 1648 aa19.51■□□□□ 0.71
Lsm3-201ENSMUST00000040607 Brd4Q9ESU6 1400 aaKnown RBP19.42■□□□□ 0.7
Lsm3-201ENSMUST00000040607 Synj1Q8CHC4 1574 aa19.41■□□□□ 0.7
Lsm3-201ENSMUST00000040607 Lrriq1Q0P5X1 1673 aa19.4■□□□□ 0.7
Lsm3-201ENSMUST00000040607 Rsf1E9PWW9 1441 aaKnown RBP19.36■□□□□ 0.69
Lsm3-201ENSMUST00000040607 Cux2P70298 1426 aa19.34■□□□□ 0.69
Lsm3-201ENSMUST00000040607 Esf1Q3V1V3 845 aaKnown RBP19.31■□□□□ 0.68
Lsm3-201ENSMUST00000040607 Rtl1Q7M732 1744 aa19.3■□□□□ 0.68
Lsm3-201ENSMUST00000040607 Kif15Q6P9L6 1387 aa19.27■□□□□ 0.68
Lsm3-201ENSMUST00000040607 Ccdc136Q3TVA9 1136 aa19.25■□□□□ 0.67
Lsm3-201ENSMUST00000040607 Npm1Q61937 292 aaKnown RBP19.22■□□□□ 0.67
Lsm3-201ENSMUST00000040607 Kif21aQ9QXL2 1672 aa19.21■□□□□ 0.67
Lsm3-201ENSMUST00000040607 Shroom2A2ALU4 1481 aa19.16■□□□□ 0.66
Lsm3-201ENSMUST00000040607 Eif4g3Q80XI3 1579 aaKnown RBP19.11■□□□□ 0.65
Lsm3-201ENSMUST00000040607 Lamc3Q9R0B6 1581 aa19.06■□□□□ 0.64
Lsm3-201ENSMUST00000040607 Cep164Q5DU05 1446 aa19.04■□□□□ 0.64
Lsm3-201ENSMUST00000040607 Pabpn1Q8CCS6 302 aaKnown RBP19.01■□□□□ 0.63
Lsm3-201ENSMUST00000040607 Col17a1Q07563 1470 aa18.97■□□□□ 0.63
Lsm3-201ENSMUST00000040607 Urb2E9Q7L1 1524 aaKnown RBP18.94■□□□□ 0.62
Lsm3-201ENSMUST00000040607 Top2bQ64511 1612 aa18.9■□□□□ 0.62
Lsm3-201ENSMUST00000040607 Dhx29Q6PGC1 1365 aaKnown RBP18.9■□□□□ 0.62
Lsm3-201ENSMUST00000040607 Plb1Q3TTY0 1478 aa18.89■□□□□ 0.61
Lsm3-201ENSMUST00000040607 Il27Q8K3I6 234 aa18.87■□□□□ 0.61
Lsm3-201ENSMUST00000040607 Ccdc18Q640L5 1455 aa18.86■□□□□ 0.61
Lsm3-201ENSMUST00000040607 LrpprcQ6PB66 1392 aaKnown RBP18.81■□□□□ 0.6
Lsm3-201ENSMUST00000040607 Pelp1Q9DBD5 1123 aaKnown RBP18.81■□□□□ 0.6
Lsm3-201ENSMUST00000040607 Crocc2F6XLV1 1638 aa18.77■□□□□ 0.6
Lsm3-201ENSMUST00000040607 Ift140E9PY46 1464 aa18.72■□□□□ 0.59
Lsm3-201ENSMUST00000040607 Zcchc11B2RX14 1644 aaKnown RBP18.7■□□□□ 0.58
Lsm3-201ENSMUST00000040607 Rusc2Q80U22 1514 aa18.68■□□□□ 0.58
Lsm3-201ENSMUST00000040607 TnnQ80Z71 1560 aa18.67■□□□□ 0.58
Lsm3-201ENSMUST00000040607 Camsap1A2AHC3 1581 aa18.64■□□□□ 0.58
Lsm3-201ENSMUST00000040607 PogzQ8BZH4 1409 aaKnown RBP18.63■□□□□ 0.57
Lsm3-201ENSMUST00000040607 Cngb1E1AZ71 1325 aa18.56■□□□□ 0.56
Lsm3-201ENSMUST00000040607 Duox2A2AQ99 1517 aa18.54■□□□□ 0.56
Lsm3-201ENSMUST00000040607 Golga3P55937 1487 aa18.54■□□□□ 0.56
Lsm3-201ENSMUST00000040607 Disp1Q3TDN0 1521 aa18.51■□□□□ 0.55
Lsm3-201ENSMUST00000040607 Cc2d2bA0A286YDU8 1405 aa18.48■□□□□ 0.55
Lsm3-201ENSMUST00000040607 Pcdh10E9PXQ7 1057 aa18.46■□□□□ 0.55
Lsm3-201ENSMUST00000040607 Setd1bQ8CFT2 1985 aa18.46■□□□□ 0.55
Lsm3-201ENSMUST00000040607 Ttbk1Q6PCN3 1308 aa18.45■□□□□ 0.54
Lsm3-201ENSMUST00000040607 Fmn1Q05860 1466 aa18.43■□□□□ 0.54
Lsm3-201ENSMUST00000040607 Adgrl3Q80TS3 1537 aa18.43■□□□□ 0.54
Lsm3-201ENSMUST00000040607 Pbrm1Q8BSQ9 1634 aaKnown RBP18.41■□□□□ 0.54
Lsm3-201ENSMUST00000040607 Nup160Q9Z0W3 1402 aaKnown RBP18.41■□□□□ 0.54
Lsm3-201ENSMUST00000040607 Arhgef5E9Q7D5 1581 aa18.41■□□□□ 0.54
Lsm3-201ENSMUST00000040607 PtprkP35822 1457 aa18.39■□□□□ 0.54
Lsm3-201ENSMUST00000040607 Gm156Q58A37 223 aa18.38■□□□□ 0.53
Lsm3-201ENSMUST00000040607 Grin2bQ01097 1482 aa18.38■□□□□ 0.53
Lsm3-201ENSMUST00000040607 Fgd6Q69ZL1 1399 aa18.36■□□□□ 0.53
Lsm3-201ENSMUST00000040607 Efcab5A0JP43 1406 aa18.35■□□□□ 0.53
Lsm3-201ENSMUST00000040607 Samd9lQ69Z37 1561 aa18.31■□□□□ 0.52
Lsm3-201ENSMUST00000040607 Cep170Q6A065 1588 aa18.31■□□□□ 0.52
Lsm3-201ENSMUST00000040607 Gapvd1Q6PAR5 1458 aa18.31■□□□□ 0.52
Lsm3-201ENSMUST00000040607 AqrQ8CFQ3 1481 aaKnown RBP18.27■□□□□ 0.52
Lsm3-201ENSMUST00000040607 PtprtQ99M80 1454 aa18.27■□□□□ 0.52
Lsm3-201ENSMUST00000040607 Rad54l2Q99NG0 1466 aa18.26■□□□□ 0.51
Lsm3-201ENSMUST00000040607 Grin2aP35436 1464 aa18.24■□□□□ 0.51
Lsm3-201ENSMUST00000040607 AknaQ80VW7 1404 aa18.2■□□□□ 0.5
Lsm3-201ENSMUST00000040607 Magi3Q9EQJ9 1476 aa18.19■□□□□ 0.5
Lsm3-201ENSMUST00000040607 Abcc1O35379 1528 aa18.16■□□□□ 0.5
Lsm3-201ENSMUST00000040607 CadpsQ80TJ1 1355 aa18.16■□□□□ 0.5
Lsm3-201ENSMUST00000040607 Ythdc2B2RR83 1445 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms