RNA–Protein interactions for RNA: ENSMUST00000039007.6

Trp53rka-201, Transcript of MCG14616, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trp53rka, Length 1,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rka-201ENSMUST00000039007 Gm35339A0A140LHH9 1649 aa44.61■■■■■ 4.73
Trp53rka-201ENSMUST00000039007 NischQ80TM9 1593 aa44.21■■■■■ 4.67
Trp53rka-201ENSMUST00000039007 Abcc9P70170 1546 aa42.83■■■■■ 4.45
Trp53rka-201ENSMUST00000039007 Abcc8B2RUS7 1588 aa42.61■■■■■ 4.41
Trp53rka-201ENSMUST00000039007 ScribQ80U72 1612 aa40.81■■■■■ 4.12
Trp53rka-201ENSMUST00000039007 NacadQ5SWP3 1504 aa39.6■■■■□ 3.93
Trp53rka-201ENSMUST00000039007 Kdm5dQ62240 1548 aa39.58■■■■□ 3.93
Trp53rka-201ENSMUST00000039007 Dcaf1Q80TR8 1506 aa39.38■■■■□ 3.89
Trp53rka-201ENSMUST00000039007 Sycp2Q9CUU3 1500 aa38.8■■■■□ 3.8
Trp53rka-201ENSMUST00000039007 Rhox8Q6VSS7 320 aa38.62■■■■□ 3.77
Trp53rka-201ENSMUST00000039007 Rb1cc1Q9ESK9 1588 aa38.58■■■■□ 3.77
Trp53rka-201ENSMUST00000039007 BicraF8VPZ9 1578 aa38.18■■■■□ 3.7
Trp53rka-201ENSMUST00000039007 Ccdc180J3QNE4 1664 aa38.17■■■■□ 3.7
Trp53rka-201ENSMUST00000039007 Baz1aO88379 1555 aa38.08■■■■□ 3.69
Trp53rka-201ENSMUST00000039007 Crybg2B7ZCC2 1516 aa37.88■■■■□ 3.65
Trp53rka-201ENSMUST00000039007 Zcchc6Q5BLK4 1491 aaKnown RBP37.41■■■■□ 3.58
Trp53rka-201ENSMUST00000039007 Pds5bQ4VA53 1446 aaKnown RBP37.03■■■■□ 3.52
Trp53rka-201ENSMUST00000039007 Smarca2Q6DIC0 1577 aa37■■■■□ 3.51
Trp53rka-201ENSMUST00000039007 Rtl1Q7M732 1744 aa36.87■■■■□ 3.49
Trp53rka-201ENSMUST00000039007 Atad2bE9Q166 1460 aaKnown RBP36.77■■■■□ 3.48
Trp53rka-201ENSMUST00000039007 Cecr2E9Q2Z1 1453 aa36.67■■■■□ 3.46
Trp53rka-201ENSMUST00000039007 Smarca4Q3TKT4 1613 aaKnown RBP36.66■■■■□ 3.46
Trp53rka-201ENSMUST00000039007 Thoc2B1AZI6 1594 aaKnown RBP36.54■■■■□ 3.44
Trp53rka-201ENSMUST00000039007 Dnajc5bQ9CQ94 199 aa36.39■■■■□ 3.42
Trp53rka-201ENSMUST00000039007 Iqgap2Q3UQ44 1575 aa36.39■■■■□ 3.42
Trp53rka-201ENSMUST00000039007 Ercc6F8VPZ5 1481 aa36.26■■■■□ 3.4
Trp53rka-201ENSMUST00000039007 Ccdc136Q3TVA9 1136 aa36.07■■■■□ 3.36
Trp53rka-201ENSMUST00000039007 Wdr62Q3U3T8 1523 aa36.01■■■■□ 3.36
Trp53rka-201ENSMUST00000039007 Brd4Q9ESU6 1400 aaKnown RBP35.99■■■■□ 3.35
Trp53rka-201ENSMUST00000039007 Cc2d2aQ8CFW7 1633 aa35.98■■■■□ 3.35
Trp53rka-201ENSMUST00000039007 Frmpd1A2AKB4 1549 aa35.95■■■■□ 3.35
Trp53rka-201ENSMUST00000039007 CftrP26361 1476 aa35.94■■■■□ 3.34
Trp53rka-201ENSMUST00000039007 Synj1Q8CHC4 1574 aa35.91■■■■□ 3.34
Trp53rka-201ENSMUST00000039007 Cttnbp2B9EJA2 1648 aa35.91■■■■□ 3.34
Trp53rka-201ENSMUST00000039007 Fam135aQ6NS59 1506 aa35.81■■■■□ 3.32
Trp53rka-201ENSMUST00000039007 Phldb1Q6PDH0 1371 aaKnown RBP35.65■■■■□ 3.3
Trp53rka-201ENSMUST00000039007 Trim41Q5NCC3 630 aa35.58■■■■□ 3.29
Trp53rka-201ENSMUST00000039007 Unc13aQ4KUS2 1712 aa35.5■■■■□ 3.27
Trp53rka-201ENSMUST00000039007 Baz1bQ9Z277 1479 aa35.44■■■■□ 3.26
Trp53rka-201ENSMUST00000039007 Esf1Q3V1V3 845 aaKnown RBP35.34■■■■□ 3.25
Trp53rka-201ENSMUST00000039007 Ubl4bQ9CQ84 188 aa35.29■■■■□ 3.24
Trp53rka-201ENSMUST00000039007 Mrc2Q64449 1479 aa34.97■■■■□ 3.19
Trp53rka-201ENSMUST00000039007 Rsf1E9PWW9 1441 aaKnown RBP34.93■■■■□ 3.18
Trp53rka-201ENSMUST00000039007 Golga3P55937 1487 aa34.88■■■■□ 3.17
Trp53rka-201ENSMUST00000039007 Kif15Q6P9L6 1387 aa34.81■■■■□ 3.16
Trp53rka-201ENSMUST00000039007 Top2bQ64511 1612 aa34.81■■■■□ 3.16
Trp53rka-201ENSMUST00000039007 Lamc3Q9R0B6 1581 aa34.8■■■■□ 3.16
Trp53rka-201ENSMUST00000039007 Cngb1E1AZ71 1325 aa34.71■■■■□ 3.15
Trp53rka-201ENSMUST00000039007 Cux2P70298 1426 aa34.69■■■■□ 3.14
Trp53rka-201ENSMUST00000039007 TnnQ80Z71 1560 aa34.55■■■■□ 3.12
Trp53rka-201ENSMUST00000039007 Fmn1Q05860 1466 aa34.4■■■■□ 3.1
Trp53rka-201ENSMUST00000039007 Npm1Q61937 292 aaKnown RBP34.37■■■■□ 3.09
Trp53rka-201ENSMUST00000039007 Kif21aQ9QXL2 1672 aa34.33■■■■□ 3.09
Trp53rka-201ENSMUST00000039007 Cep164Q5DU05 1446 aa34.3■■■■□ 3.08
Trp53rka-201ENSMUST00000039007 Ccdc18Q640L5 1455 aa34.29■■■■□ 3.08
Trp53rka-201ENSMUST00000039007 Camsap1A2AHC3 1581 aa34.22■■■■□ 3.07
Trp53rka-201ENSMUST00000039007 Lrriq1Q0P5X1 1673 aa34.19■■■■□ 3.06
Trp53rka-201ENSMUST00000039007 Il27Q8K3I6 234 aa34.14■■■■□ 3.06
Trp53rka-201ENSMUST00000039007 Ccdc88bQ4QRL3 1481 aa34.05■■■■□ 3.04
Trp53rka-201ENSMUST00000039007 LrpprcQ6PB66 1392 aaKnown RBP34.03■■■■□ 3.04
Trp53rka-201ENSMUST00000039007 Dhx29Q6PGC1 1365 aaKnown RBP33.99■■■■□ 3.03
Trp53rka-201ENSMUST00000039007 PogzQ8BZH4 1409 aaKnown RBP33.86■■■■□ 3.01
Trp53rka-201ENSMUST00000039007 Crocc2F6XLV1 1638 aa33.86■■■■□ 3.01
Trp53rka-201ENSMUST00000039007 Top2aQ01320 1528 aaKnown RBP33.84■■■■□ 3.01
Trp53rka-201ENSMUST00000039007 Chic1Q8CBW7 227 aa33.84■■■■□ 3.01
Trp53rka-201ENSMUST00000039007 Urb2E9Q7L1 1524 aaKnown RBP33.81■■■■□ 3
Trp53rka-201ENSMUST00000039007 Grin2bQ01097 1482 aa33.8■■■■□ 3
Trp53rka-201ENSMUST00000039007 Plb1Q3TTY0 1478 aa33.78■■■■□ 3
Trp53rka-201ENSMUST00000039007 Duox2A2AQ99 1517 aa33.72■■■□□ 2.99
Trp53rka-201ENSMUST00000039007 Eif4g3Q80XI3 1579 aaKnown RBP33.71■■■□□ 2.99
Trp53rka-201ENSMUST00000039007 HrcG5E8J6 738 aa33.67■■■□□ 2.98
Trp53rka-201ENSMUST00000039007 Efcab5A0JP43 1406 aa33.57■■■□□ 2.96
Trp53rka-201ENSMUST00000039007 NrkQ9R0G8 1455 aa33.56■■■□□ 2.96
Trp53rka-201ENSMUST00000039007 Ift140E9PY46 1464 aa33.54■■■□□ 2.96
Trp53rka-201ENSMUST00000039007 Samd9lQ69Z37 1561 aa33.46■■■□□ 2.95
Trp53rka-201ENSMUST00000039007 Shroom4Q1W617 1475 aa33.41■■■□□ 2.94
Trp53rka-201ENSMUST00000039007 PtprkP35822 1457 aa33.36■■■□□ 2.93
Trp53rka-201ENSMUST00000039007 Disp1Q3TDN0 1521 aa33.36■■■□□ 2.93
Trp53rka-201ENSMUST00000039007 Rusc2Q80U22 1514 aa33.32■■■□□ 2.92
Trp53rka-201ENSMUST00000039007 Pbrm1Q8BSQ9 1634 aaKnown RBP33.28■■■□□ 2.92
Trp53rka-201ENSMUST00000039007 Rad54l2Q99NG0 1466 aa33.21■■■□□ 2.91
Trp53rka-201ENSMUST00000039007 Setd1bQ8CFT2 1985 aa33.21■■■□□ 2.91
Trp53rka-201ENSMUST00000039007 Nup160Q9Z0W3 1402 aaKnown RBP33.21■■■□□ 2.91
Trp53rka-201ENSMUST00000039007 Cc2d2bA0A286YDU8 1405 aa33.13■■■□□ 2.89
Trp53rka-201ENSMUST00000039007 Grin2aP35436 1464 aa33.12■■■□□ 2.89
Trp53rka-201ENSMUST00000039007 Magi3Q9EQJ9 1476 aa33.12■■■□□ 2.89
Trp53rka-201ENSMUST00000039007 SynmQ70IV5 1561 aa33.11■■■□□ 2.89
Trp53rka-201ENSMUST00000039007 Npm2Q80W85 207 aa33.1■■■□□ 2.89
Trp53rka-201ENSMUST00000039007 Gab3Q8BSM5 595 aa33.08■■■□□ 2.89
Trp53rka-201ENSMUST00000039007 Zeb1Q64318 1117 aa33.03■■■□□ 2.88
Trp53rka-201ENSMUST00000039007 Shroom2A2ALU4 1481 aa33.01■■■□□ 2.88
Trp53rka-201ENSMUST00000039007 Mroh2bQ7M6Y6 1581 aa33■■■□□ 2.87
Trp53rka-201ENSMUST00000039007 Rapgef2Q8CHG7 1496 aa32.99■■■□□ 2.87
Trp53rka-201ENSMUST00000039007 Pla2r1Q62028 1487 aa32.98■■■□□ 2.87
Trp53rka-201ENSMUST00000039007 Gpatch8A2A6A1 1505 aa32.97■■■□□ 2.87
Trp53rka-201ENSMUST00000039007 AqrQ8CFQ3 1481 aaKnown RBP32.94■■■□□ 2.86
Trp53rka-201ENSMUST00000039007 Arhgap35Q91YM2 1499 aa32.83■■■□□ 2.85
Trp53rka-201ENSMUST00000039007 Map3k1P53349 1493 aa32.82■■■□□ 2.84
Trp53rka-201ENSMUST00000039007 Eif4g1Q6NZJ6 1600 aaKnown RBP32.79■■■□□ 2.84
Trp53rka-201ENSMUST00000039007 Rpgrip1Q9EPQ2 1331 aa32.78■■■□□ 2.84
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms