RNA–Protein interactions for RNA: ENSMUST00000038332.8

Ctu1-201, Transcript of Cytoplasmic tRNA 2-thiolation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctu1, Length 2,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctu1-201ENSMUST00000038332 NischQ80TM9 1593 aa34.96■■■■□ 3.19
Ctu1-201ENSMUST00000038332 Gm35339A0A140LHH9 1649 aa34.95■■■■□ 3.19
Ctu1-201ENSMUST00000038332 Abcc9P70170 1546 aa33.78■■■■□ 3
Ctu1-201ENSMUST00000038332 Abcc8B2RUS7 1588 aa33.59■■■□□ 2.97
Ctu1-201ENSMUST00000038332 ScribQ80U72 1612 aa32.07■■■□□ 2.72
Ctu1-201ENSMUST00000038332 Kdm5dQ62240 1548 aa31.18■■■□□ 2.58
Ctu1-201ENSMUST00000038332 NacadQ5SWP3 1504 aa31.17■■■□□ 2.58
Ctu1-201ENSMUST00000038332 Rhox8Q6VSS7 320 aa31.05■■■□□ 2.56
Ctu1-201ENSMUST00000038332 Dcaf1Q80TR8 1506 aa30.95■■■□□ 2.55
Ctu1-201ENSMUST00000038332 Sycp2Q9CUU3 1500 aa30.53■■■□□ 2.48
Ctu1-201ENSMUST00000038332 Rb1cc1Q9ESK9 1588 aa30.49■■■□□ 2.47
Ctu1-201ENSMUST00000038332 Baz1aO88379 1555 aa30.06■■■□□ 2.4
Ctu1-201ENSMUST00000038332 BicraF8VPZ9 1578 aa30.02■■■□□ 2.4
Ctu1-201ENSMUST00000038332 Ccdc180J3QNE4 1664 aa29.92■■■□□ 2.38
Ctu1-201ENSMUST00000038332 Crybg2B7ZCC2 1516 aa29.8■■■□□ 2.36
Ctu1-201ENSMUST00000038332 Zcchc6Q5BLK4 1491 aaKnown RBP29.72■■■□□ 2.35
Ctu1-201ENSMUST00000038332 Smarca2Q6DIC0 1577 aa29.2■■■□□ 2.27
Ctu1-201ENSMUST00000038332 Rtl1Q7M732 1744 aa29.15■■■□□ 2.26
Ctu1-201ENSMUST00000038332 Pds5bQ4VA53 1446 aaKnown RBP29.12■■■□□ 2.25
Ctu1-201ENSMUST00000038332 Cecr2E9Q2Z1 1453 aa29.06■■■□□ 2.24
Ctu1-201ENSMUST00000038332 Ccdc136Q3TVA9 1136 aa29.01■■■□□ 2.23
Ctu1-201ENSMUST00000038332 Atad2bE9Q166 1460 aaKnown RBP28.94■■■□□ 2.22
Ctu1-201ENSMUST00000038332 Smarca4Q3TKT4 1613 aaKnown RBP28.87■■■□□ 2.21
Ctu1-201ENSMUST00000038332 Dnajc5bQ9CQ94 199 aa28.72■■■□□ 2.19
Ctu1-201ENSMUST00000038332 Iqgap2Q3UQ44 1575 aa28.67■■■□□ 2.18
Ctu1-201ENSMUST00000038332 Thoc2B1AZI6 1594 aaKnown RBP28.58■■■□□ 2.17
Ctu1-201ENSMUST00000038332 Ercc6F8VPZ5 1481 aa28.54■■■□□ 2.16
Ctu1-201ENSMUST00000038332 Brd4Q9ESU6 1400 aaKnown RBP28.53■■■□□ 2.16
Ctu1-201ENSMUST00000038332 Trim41Q5NCC3 630 aa28.44■■■□□ 2.14
Ctu1-201ENSMUST00000038332 CftrP26361 1476 aa28.43■■■□□ 2.14
Ctu1-201ENSMUST00000038332 Synj1Q8CHC4 1574 aa28.42■■■□□ 2.14
Ctu1-201ENSMUST00000038332 Rpgrip1Q9EPQ2 1331 aa28.34■■■□□ 2.13
Ctu1-201ENSMUST00000038332 Frmpd1A2AKB4 1549 aa28.34■■■□□ 2.13
Ctu1-201ENSMUST00000038332 Wdr62Q3U3T8 1523 aa28.31■■■□□ 2.12
Ctu1-201ENSMUST00000038332 Cttnbp2B9EJA2 1648 aa28.31■■■□□ 2.12
Ctu1-201ENSMUST00000038332 Cc2d2aQ8CFW7 1633 aa28.27■■■□□ 2.12
Ctu1-201ENSMUST00000038332 Esf1Q3V1V3 845 aaKnown RBP28.27■■■□□ 2.12
Ctu1-201ENSMUST00000038332 Phldb1Q6PDH0 1371 aaKnown RBP28.1■■■□□ 2.09
Ctu1-201ENSMUST00000038332 Fam135aQ6NS59 1506 aa28.04■■■□□ 2.08
Ctu1-201ENSMUST00000038332 Ubl4bQ9CQ84 188 aa28■■■□□ 2.07
Ctu1-201ENSMUST00000038332 Unc13aQ4KUS2 1712 aa27.87■■■□□ 2.05
Ctu1-201ENSMUST00000038332 Cngb1E1AZ71 1325 aa27.86■■■□□ 2.05
Ctu1-201ENSMUST00000038332 Golga3P55937 1487 aa27.7■■■□□ 2.02
Ctu1-201ENSMUST00000038332 Rsf1E9PWW9 1441 aaKnown RBP27.64■■■□□ 2.01
Ctu1-201ENSMUST00000038332 Kif15Q6P9L6 1387 aa27.61■■■□□ 2.01
Ctu1-201ENSMUST00000038332 Baz1bQ9Z277 1479 aa27.6■■■□□ 2.01
Ctu1-201ENSMUST00000038332 Top2bQ64511 1612 aa27.5■■□□□ 1.99
Ctu1-201ENSMUST00000038332 Mrc2Q64449 1479 aa27.5■■□□□ 1.99
Ctu1-201ENSMUST00000038332 Acin1Q9JIX8 1338 aaKnown RBP27.47■■□□□ 1.99
Ctu1-201ENSMUST00000038332 Cux2P70298 1426 aa27.44■■□□□ 1.98
Ctu1-201ENSMUST00000038332 Lamc3Q9R0B6 1581 aa27.42■■□□□ 1.98
Ctu1-201ENSMUST00000038332 Npm1Q61937 292 aaKnown RBP27.33■■□□□ 1.97
Ctu1-201ENSMUST00000038332 Il27Q8K3I6 234 aa27.33■■□□□ 1.97
Ctu1-201ENSMUST00000038332 Fmn1Q05860 1466 aa27.26■■□□□ 1.95
Ctu1-201ENSMUST00000038332 TnnQ80Z71 1560 aa27.21■■□□□ 1.95
Ctu1-201ENSMUST00000038332 Ccdc88bQ4QRL3 1481 aa27.16■■□□□ 1.94
Ctu1-201ENSMUST00000038332 Chic1Q8CBW7 227 aa27.16■■□□□ 1.94
Ctu1-201ENSMUST00000038332 Ccdc18Q640L5 1455 aa27.14■■□□□ 1.93
Ctu1-201ENSMUST00000038332 Cep164Q5DU05 1446 aa27.11■■□□□ 1.93
Ctu1-201ENSMUST00000038332 HrcG5E8J6 738 aa27.02■■□□□ 1.92
Ctu1-201ENSMUST00000038332 Camsap1A2AHC3 1581 aa27.02■■□□□ 1.92
Ctu1-201ENSMUST00000038332 Kif21aQ9QXL2 1672 aa27.01■■□□□ 1.92
Ctu1-201ENSMUST00000038332 LrpprcQ6PB66 1392 aaKnown RBP26.93■■□□□ 1.9
Ctu1-201ENSMUST00000038332 Dhx29Q6PGC1 1365 aaKnown RBP26.9■■□□□ 1.9
Ctu1-201ENSMUST00000038332 Pcgf6Q99NA9 353 aa26.89■■□□□ 1.89
Ctu1-201ENSMUST00000038332 Lrriq1Q0P5X1 1673 aa26.84■■□□□ 1.89
Ctu1-201ENSMUST00000038332 Top2aQ01320 1528 aaKnown RBP26.8■■□□□ 1.88
Ctu1-201ENSMUST00000038332 PogzQ8BZH4 1409 aaKnown RBP26.76■■□□□ 1.87
Ctu1-201ENSMUST00000038332 Grin2bQ01097 1482 aa26.74■■□□□ 1.87
Ctu1-201ENSMUST00000038332 Gab3Q8BSM5 595 aa26.72■■□□□ 1.87
Ctu1-201ENSMUST00000038332 Plb1Q3TTY0 1478 aa26.7■■□□□ 1.86
Ctu1-201ENSMUST00000038332 Crocc2F6XLV1 1638 aa26.69■■□□□ 1.86
Ctu1-201ENSMUST00000038332 Duox2A2AQ99 1517 aa26.68■■□□□ 1.86
Ctu1-201ENSMUST00000038332 Urb2E9Q7L1 1524 aaKnown RBP26.66■■□□□ 1.86
Ctu1-201ENSMUST00000038332 Ehmt2Q9Z148 1263 aaKnown RBP26.64■■□□□ 1.85
Ctu1-201ENSMUST00000038332 Npm2Q80W85 207 aa26.56■■□□□ 1.84
Ctu1-201ENSMUST00000038332 Efcab5A0JP43 1406 aa26.55■■□□□ 1.84
Ctu1-201ENSMUST00000038332 NrkQ9R0G8 1455 aa26.54■■□□□ 1.84
Ctu1-201ENSMUST00000038332 PtprkP35822 1457 aa26.53■■□□□ 1.84
Ctu1-201ENSMUST00000038332 Zeb1Q64318 1117 aa26.48■■□□□ 1.83
Ctu1-201ENSMUST00000038332 Shroom4Q1W617 1475 aa26.46■■□□□ 1.83
Ctu1-201ENSMUST00000038332 Samd9lQ69Z37 1561 aa26.42■■□□□ 1.82
Ctu1-201ENSMUST00000038332 Ift140E9PY46 1464 aa26.42■■□□□ 1.82
Ctu1-201ENSMUST00000038332 Eif4g3Q80XI3 1579 aaKnown RBP26.4■■□□□ 1.82
Ctu1-201ENSMUST00000038332 Rad54l2Q99NG0 1466 aa26.36■■□□□ 1.81
Ctu1-201ENSMUST00000038332 Disp1Q3TDN0 1521 aa26.35■■□□□ 1.81
Ctu1-201ENSMUST00000038332 Rapgef2Q8CHG7 1496 aa26.28■■□□□ 1.8
Ctu1-201ENSMUST00000038332 Myt1lP97500 1187 aa26.2■■□□□ 1.78
Ctu1-201ENSMUST00000038332 Grin2aP35436 1464 aa26.17■■□□□ 1.78
Ctu1-201ENSMUST00000038332 Rusc2Q80U22 1514 aa26.17■■□□□ 1.78
Ctu1-201ENSMUST00000038332 SynmQ70IV5 1561 aa26.16■■□□□ 1.78
Ctu1-201ENSMUST00000038332 Nup160Q9Z0W3 1402 aaKnown RBP26.16■■□□□ 1.78
Ctu1-201ENSMUST00000038332 Mroh2bQ7M6Y6 1581 aa26.16■■□□□ 1.78
Ctu1-201ENSMUST00000038332 Magi3Q9EQJ9 1476 aa26.15■■□□□ 1.78
Ctu1-201ENSMUST00000038332 Cep162Q6ZQ06 1403 aa26.13■■□□□ 1.77
Ctu1-201ENSMUST00000038332 Supt5hO55201 1082 aaKnown RBP26.12■■□□□ 1.77
Ctu1-201ENSMUST00000038332 Cc2d2bA0A286YDU8 1405 aa26.12■■□□□ 1.77
Ctu1-201ENSMUST00000038332 Setd1bQ8CFT2 1985 aa26.12■■□□□ 1.77
Ctu1-201ENSMUST00000038332 Arhgap35Q91YM2 1499 aa26.09■■□□□ 1.77
Ctu1-201ENSMUST00000038332 Pbrm1Q8BSQ9 1634 aaKnown RBP26.09■■□□□ 1.77
Retrieved 100 of 22,080 RNA–protein pairs in 94.8 ms