RNA–Protein interactions for RNA: ENSMUST00000032907.8

Calca-202, Transcript of Calcitonin, mousemouse

TSL 1 (best) BASIC

Gene Calca, Length 830 nt, Biotype protein coding, Subcellular localisation Paraspeckles .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Calca-202ENSMUST00000032907 Gm35339A0A140LHH9 1649 aa20.35■□□□□ 0.85
Calca-202ENSMUST00000032907 NischQ80TM9 1593 aa20.1■□□□□ 0.81
Calca-202ENSMUST00000032907 Abcc9P70170 1546 aa19.51■□□□□ 0.71
Calca-202ENSMUST00000032907 Abcc8B2RUS7 1588 aa19.38■□□□□ 0.69
Calca-202ENSMUST00000032907 Chic1Q8CBW7 227 aa18.99■□□□□ 0.63
Calca-202ENSMUST00000032907 Mapk8ip2Q9ERE9 830 aa18.65■□□□□ 0.58
Calca-202ENSMUST00000032907 ScribQ80U72 1612 aa18.64■□□□□ 0.57
Calca-202ENSMUST00000032907 Kdm5dQ62240 1548 aa18.03■□□□□ 0.48
Calca-202ENSMUST00000032907 NacadQ5SWP3 1504 aa17.97■□□□□ 0.47
Calca-202ENSMUST00000032907 Dcaf1Q80TR8 1506 aa17.85■□□□□ 0.45
Calca-202ENSMUST00000032907 Dnajc5bQ9CQ94 199 aa17.66■□□□□ 0.42
Calca-202ENSMUST00000032907 Sycp2Q9CUU3 1500 aa17.62■□□□□ 0.41
Calca-202ENSMUST00000032907 Rb1cc1Q9ESK9 1588 aa17.57■□□□□ 0.4
Calca-202ENSMUST00000032907 Rhox8Q6VSS7 320 aa17.5■□□□□ 0.39
Calca-202ENSMUST00000032907 BicraF8VPZ9 1578 aa17.4■□□□□ 0.38
Calca-202ENSMUST00000032907 Ccdc180J3QNE4 1664 aa17.36■□□□□ 0.37
Calca-202ENSMUST00000032907 Baz1aO88379 1555 aa17.32■□□□□ 0.36
Calca-202ENSMUST00000032907 Crybg2B7ZCC2 1516 aa17.12■□□□□ 0.33
Calca-202ENSMUST00000032907 Phf23Q8BSN5 401 aa17.1■□□□□ 0.33
Calca-202ENSMUST00000032907 Zcchc6Q5BLK4 1491 aaKnown RBP17■□□□□ 0.31
Calca-202ENSMUST00000032907 Rtl1Q7M732 1744 aa16.86■□□□□ 0.29
Calca-202ENSMUST00000032907 Smarca2Q6DIC0 1577 aa16.85■□□□□ 0.29
Calca-202ENSMUST00000032907 Pds5bQ4VA53 1446 aaKnown RBP16.76■□□□□ 0.27
Calca-202ENSMUST00000032907 Thoc2B1AZI6 1594 aaKnown RBP16.72■□□□□ 0.27
Calca-202ENSMUST00000032907 Cecr2E9Q2Z1 1453 aa16.69■□□□□ 0.26
Calca-202ENSMUST00000032907 Smarca4Q3TKT4 1613 aaKnown RBP16.67■□□□□ 0.26
Calca-202ENSMUST00000032907 Atad2bE9Q166 1460 aaKnown RBP16.67■□□□□ 0.26
Calca-202ENSMUST00000032907 Dnajc5P60904 198 aa16.66■□□□□ 0.26
Calca-202ENSMUST00000032907 Iqgap2Q3UQ44 1575 aa16.56■□□□□ 0.24
Calca-202ENSMUST00000032907 Ercc6F8VPZ5 1481 aa16.45■□□□□ 0.22
Calca-202ENSMUST00000032907 Cc2d2aQ8CFW7 1633 aa16.42■□□□□ 0.22
Calca-202ENSMUST00000032907 Plppr3Q7TPB0 716 aa16.4■□□□□ 0.22
Calca-202ENSMUST00000032907 Wdr62Q3U3T8 1523 aa16.38■□□□□ 0.21
Calca-202ENSMUST00000032907 Synj1Q8CHC4 1574 aa16.38■□□□□ 0.21
Calca-202ENSMUST00000032907 Cttnbp2B9EJA2 1648 aa16.36■□□□□ 0.21
Calca-202ENSMUST00000032907 Ccdc136Q3TVA9 1136 aa16.35■□□□□ 0.21
Calca-202ENSMUST00000032907 Frmpd1A2AKB4 1549 aa16.34■□□□□ 0.21
Calca-202ENSMUST00000032907 Gab3Q8BSM5 595 aa16.33■□□□□ 0.2
Calca-202ENSMUST00000032907 CftrP26361 1476 aa16.31■□□□□ 0.2
Calca-202ENSMUST00000032907 Brd4Q9ESU6 1400 aaKnown RBP16.29■□□□□ 0.2
Calca-202ENSMUST00000032907 Fam135aQ6NS59 1506 aa16.29■□□□□ 0.2
Calca-202ENSMUST00000032907 Unc13aQ4KUS2 1712 aa16.28■□□□□ 0.2
Calca-202ENSMUST00000032907 Trim41Q5NCC3 630 aa16.19■□□□□ 0.18
Calca-202ENSMUST00000032907 Phldb1Q6PDH0 1371 aaKnown RBP16.12■□□□□ 0.17
Calca-202ENSMUST00000032907 Baz1bQ9Z277 1479 aa15.97■□□□□ 0.15
Calca-202ENSMUST00000032907 Esf1Q3V1V3 845 aaKnown RBP15.96■□□□□ 0.15
Calca-202ENSMUST00000032907 Ubl4bQ9CQ84 188 aa15.94■□□□□ 0.14
Calca-202ENSMUST00000032907 Top2bQ64511 1612 aa15.87■□□□□ 0.13
Calca-202ENSMUST00000032907 Mrc2Q64449 1479 aa15.87■□□□□ 0.13
Calca-202ENSMUST00000032907 Golga3P55937 1487 aa15.84■□□□□ 0.13
Calca-202ENSMUST00000032907 Lamc3Q9R0B6 1581 aa15.83■□□□□ 0.12
Calca-202ENSMUST00000032907 Rsf1E9PWW9 1441 aaKnown RBP15.81■□□□□ 0.12
Calca-202ENSMUST00000032907 Kif15Q6P9L6 1387 aa15.78■□□□□ 0.12
Calca-202ENSMUST00000032907 TnnQ80Z71 1560 aa15.75■□□□□ 0.11
Calca-202ENSMUST00000032907 Cngb1E1AZ71 1325 aa15.74■□□□□ 0.11
Calca-202ENSMUST00000032907 Cux2P70298 1426 aa15.73■□□□□ 0.11
Calca-202ENSMUST00000032907 Kif21aQ9QXL2 1672 aa15.68■□□□□ 0.1
Calca-202ENSMUST00000032907 Senp3Q9EP97 568 aaKnown RBP15.63■□□□□ 0.09
Calca-202ENSMUST00000032907 Fmn1Q05860 1466 aa15.61■□□□□ 0.09
Calca-202ENSMUST00000032907 Lrriq1Q0P5X1 1673 aa15.6■□□□□ 0.09
Calca-202ENSMUST00000032907 Camsap1A2AHC3 1581 aa15.58■□□□□ 0.09
Calca-202ENSMUST00000032907 Shroom2A2ALU4 1481 aa15.52■□□□□ 0.07
Calca-202ENSMUST00000032907 Cep164Q5DU05 1446 aa15.51■□□□□ 0.07
Calca-202ENSMUST00000032907 Ccdc88bQ4QRL3 1481 aa15.51■□□□□ 0.07
Calca-202ENSMUST00000032907 Ccdc18Q640L5 1455 aa15.51■□□□□ 0.07
Calca-202ENSMUST00000032907 Npm1Q61937 292 aaKnown RBP15.5■□□□□ 0.07
Calca-202ENSMUST00000032907 Col17a1Q07563 1470 aa15.49■□□□□ 0.07
Calca-202ENSMUST00000032907 Il27Q8K3I6 234 aa15.48■□□□□ 0.07
Calca-202ENSMUST00000032907 Dhx29Q6PGC1 1365 aaKnown RBP15.41■□□□□ 0.06
Calca-202ENSMUST00000032907 Crocc2F6XLV1 1638 aa15.41■□□□□ 0.06
Calca-202ENSMUST00000032907 Top2aQ01320 1528 aaKnown RBP15.4■□□□□ 0.06
Calca-202ENSMUST00000032907 LrpprcQ6PB66 1392 aaKnown RBP15.39■□□□□ 0.05
Calca-202ENSMUST00000032907 Urb2E9Q7L1 1524 aaKnown RBP15.38■□□□□ 0.05
Calca-202ENSMUST00000032907 Eif4g3Q80XI3 1579 aaKnown RBP15.36■□□□□ 0.05
Calca-202ENSMUST00000032907 PogzQ8BZH4 1409 aaKnown RBP15.35■□□□□ 0.05
Calca-202ENSMUST00000032907 Grin2bQ01097 1482 aa15.34■□□□□ 0.05
Calca-202ENSMUST00000032907 Plb1Q3TTY0 1478 aa15.33■□□□□ 0.05
Calca-202ENSMUST00000032907 Duox2A2AQ99 1517 aa15.3■□□□□ 0.04
Calca-202ENSMUST00000032907 Samd9lQ69Z37 1561 aa15.26■□□□□ 0.03
Calca-202ENSMUST00000032907 Pabpn1Q8CCS6 302 aaKnown RBP15.24■□□□□ 0.03
Calca-202ENSMUST00000032907 Setd1bQ8CFT2 1985 aa15.23■□□□□ 0.03
Calca-202ENSMUST00000032907 NrkQ9R0G8 1455 aa15.2■□□□□ 0.02
Calca-202ENSMUST00000032907 Pcdh10E9PXQ7 1057 aa15.2■□□□□ 0.02
Calca-202ENSMUST00000032907 Ift140E9PY46 1464 aa15.19■□□□□ 0.02
Calca-202ENSMUST00000032907 PtprkP35822 1457 aa15.19■□□□□ 0.02
Calca-202ENSMUST00000032907 HrcG5E8J6 738 aa15.18■□□□□ 0.02
Calca-202ENSMUST00000032907 Shroom4Q1W617 1475 aa15.18■□□□□ 0.02
Calca-202ENSMUST00000032907 Efcab5A0JP43 1406 aa15.17■□□□□ 0.02
Calca-202ENSMUST00000032907 Rusc2Q80U22 1514 aa15.16■□□□□ 0.02
Calca-202ENSMUST00000032907 Pbrm1Q8BSQ9 1634 aaKnown RBP15.14■□□□□ 0.01
Calca-202ENSMUST00000032907 Disp1Q3TDN0 1521 aa15.14■□□□□ 0.01
Calca-202ENSMUST00000032907 Rad54l2Q99NG0 1466 aa15.11■□□□□ 0.01
Calca-202ENSMUST00000032907 Pelp1Q9DBD5 1123 aaKnown RBP15.08■□□□□ 0
Calca-202ENSMUST00000032907 Zcchc11B2RX14 1644 aaKnown RBP15.07■□□□□ 0
Calca-202ENSMUST00000032907 Nup160Q9Z0W3 1402 aaKnown RBP15.07■□□□□ 0
Calca-202ENSMUST00000032907 Magi3Q9EQJ9 1476 aa15.07■□□□□ 0
Calca-202ENSMUST00000032907 SynmQ70IV5 1561 aa15.07■□□□□ 0
Calca-202ENSMUST00000032907 Grin2aP35436 1464 aa15.03■□□□□ -0
Calca-202ENSMUST00000032907 Gpatch8A2A6A1 1505 aa15.02□□□□□ -0.01
Calca-202ENSMUST00000032907 Pla2r1Q62028 1487 aa15.01□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms