RNA–Protein interactions for RNA: ENSMUST00000032597.11

Rpl28-201, Transcript of 60S ribosomal protein L28, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rpl28, Length 1,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28-201ENSMUST00000032597 Gm35339A0A140LHH9 1649 aa34.62■■■■□ 3.13
Rpl28-201ENSMUST00000032597 Abcc9P70170 1546 aa33.89■■■■□ 3.02
Rpl28-201ENSMUST00000032597 NischQ80TM9 1593 aa33.72■■■□□ 2.99
Rpl28-201ENSMUST00000032597 Abcc8B2RUS7 1588 aa32.92■■■□□ 2.86
Rpl28-201ENSMUST00000032597 ScribQ80U72 1612 aa32.65■■■□□ 2.82
Rpl28-201ENSMUST00000032597 Dnajc5bQ9CQ94 199 aa31.8■■■□□ 2.68
Rpl28-201ENSMUST00000032597 NacadQ5SWP3 1504 aa31.24■■■□□ 2.59
Rpl28-201ENSMUST00000032597 Kdm5dQ62240 1548 aa31.24■■■□□ 2.59
Rpl28-201ENSMUST00000032597 Sycp2Q9CUU3 1500 aa30.73■■■□□ 2.51
Rpl28-201ENSMUST00000032597 BicraF8VPZ9 1578 aa30.62■■■□□ 2.49
Rpl28-201ENSMUST00000032597 Thoc2B1AZI6 1594 aaKnown RBP30.23■■■□□ 2.43
Rpl28-201ENSMUST00000032597 Dcaf1Q80TR8 1506 aa29.96■■■□□ 2.39
Rpl28-201ENSMUST00000032597 Pds5bQ4VA53 1446 aaKnown RBP29.85■■■□□ 2.37
Rpl28-201ENSMUST00000032597 Dnajc5P60904 198 aa29.81■■■□□ 2.36
Rpl28-201ENSMUST00000032597 Cc2d2aQ8CFW7 1633 aa29.75■■■□□ 2.35
Rpl28-201ENSMUST00000032597 Trim41Q5NCC3 630 aa29.4■■■□□ 2.3
Rpl28-201ENSMUST00000032597 Rb1cc1Q9ESK9 1588 aa29.38■■■□□ 2.29
Rpl28-201ENSMUST00000032597 Ercc6F8VPZ5 1481 aa29.33■■■□□ 2.29
Rpl28-201ENSMUST00000032597 Atad2bE9Q166 1460 aaKnown RBP29.32■■■□□ 2.28
Rpl28-201ENSMUST00000032597 Fam135aQ6NS59 1506 aa29.23■■■□□ 2.27
Rpl28-201ENSMUST00000032597 Smarca2Q6DIC0 1577 aa28.93■■■□□ 2.22
Rpl28-201ENSMUST00000032597 Iqgap2Q3UQ44 1575 aa28.77■■■□□ 2.2
Rpl28-201ENSMUST00000032597 Baz1aO88379 1555 aa28.74■■■□□ 2.19
Rpl28-201ENSMUST00000032597 Zcchc6Q5BLK4 1491 aaKnown RBP28.73■■■□□ 2.19
Rpl28-201ENSMUST00000032597 Smarca4Q3TKT4 1613 aaKnown RBP28.7■■■□□ 2.19
Rpl28-201ENSMUST00000032597 Wdr62Q3U3T8 1523 aa28.69■■■□□ 2.18
Rpl28-201ENSMUST00000032597 Phldb1Q6PDH0 1371 aaKnown RBP28.66■■■□□ 2.18
Rpl28-201ENSMUST00000032597 Frmpd1A2AKB4 1549 aa28.64■■■□□ 2.18
Rpl28-201ENSMUST00000032597 Mrc2Q64449 1479 aa28.57■■■□□ 2.16
Rpl28-201ENSMUST00000032597 Ubl4bQ9CQ84 188 aa28.56■■■□□ 2.16
Rpl28-201ENSMUST00000032597 Crybg2B7ZCC2 1516 aa28.51■■■□□ 2.15
Rpl28-201ENSMUST00000032597 Baz1bQ9Z277 1479 aa28.48■■■□□ 2.15
Rpl28-201ENSMUST00000032597 Cecr2E9Q2Z1 1453 aa28.35■■■□□ 2.13
Rpl28-201ENSMUST00000032597 Unc13aQ4KUS2 1712 aa28.35■■■□□ 2.13
Rpl28-201ENSMUST00000032597 Ccdc180J3QNE4 1664 aa28.32■■■□□ 2.12
Rpl28-201ENSMUST00000032597 Lrriq1Q0P5X1 1673 aa28.16■■■□□ 2.1
Rpl28-201ENSMUST00000032597 Rhox8Q6VSS7 320 aa28.11■■■□□ 2.09
Rpl28-201ENSMUST00000032597 Shroom2A2ALU4 1481 aa27.93■■■□□ 2.06
Rpl28-201ENSMUST00000032597 Rsf1E9PWW9 1441 aaKnown RBP27.92■■■□□ 2.06
Rpl28-201ENSMUST00000032597 Col17a1Q07563 1470 aa27.89■■■□□ 2.05
Rpl28-201ENSMUST00000032597 Kif21aQ9QXL2 1672 aa27.71■■■□□ 2.03
Rpl28-201ENSMUST00000032597 Eif4g3Q80XI3 1579 aaKnown RBP27.68■■■□□ 2.02
Rpl28-201ENSMUST00000032597 Cux2P70298 1426 aa27.5■■□□□ 1.99
Rpl28-201ENSMUST00000032597 Top2bQ64511 1612 aa27.49■■□□□ 1.99
Rpl28-201ENSMUST00000032597 Pabpn1Q8CCS6 302 aaKnown RBP27.46■■□□□ 1.99
Rpl28-201ENSMUST00000032597 Pcdh10E9PXQ7 1057 aa27.41■■□□□ 1.98
Rpl28-201ENSMUST00000032597 Pelp1Q9DBD5 1123 aaKnown RBP27.41■■□□□ 1.98
Rpl28-201ENSMUST00000032597 Cttnbp2B9EJA2 1648 aa27.38■■□□□ 1.97
Rpl28-201ENSMUST00000032597 CftrP26361 1476 aa27.34■■□□□ 1.97
Rpl28-201ENSMUST00000032597 Synj1Q8CHC4 1574 aa27.3■■□□□ 1.96
Rpl28-201ENSMUST00000032597 Kif15Q6P9L6 1387 aa27.27■■□□□ 1.96
Rpl28-201ENSMUST00000032597 Urb2E9Q7L1 1524 aaKnown RBP27.15■■□□□ 1.94
Rpl28-201ENSMUST00000032597 Zcchc11B2RX14 1644 aaKnown RBP27.14■■□□□ 1.94
Rpl28-201ENSMUST00000032597 Arhgef5E9Q7D5 1581 aa27.08■■□□□ 1.93
Rpl28-201ENSMUST00000032597 Plb1Q3TTY0 1478 aa27.06■■□□□ 1.92
Rpl28-201ENSMUST00000032597 Npm1Q61937 292 aaKnown RBP27.06■■□□□ 1.92
Rpl28-201ENSMUST00000032597 Ttbk1Q6PCN3 1308 aa26.99■■□□□ 1.91
Rpl28-201ENSMUST00000032597 Esf1Q3V1V3 845 aaKnown RBP26.9■■□□□ 1.9
Rpl28-201ENSMUST00000032597 Rusc2Q80U22 1514 aa26.87■■□□□ 1.89
Rpl28-201ENSMUST00000032597 Cep164Q5DU05 1446 aa26.86■■□□□ 1.89
Rpl28-201ENSMUST00000032597 Brd4Q9ESU6 1400 aaKnown RBP26.84■■□□□ 1.89
Rpl28-201ENSMUST00000032597 Dhx29Q6PGC1 1365 aaKnown RBP26.82■■□□□ 1.88
Rpl28-201ENSMUST00000032597 Adgrl3Q80TS3 1537 aa26.8■■□□□ 1.88
Rpl28-201ENSMUST00000032597 Lamc3Q9R0B6 1581 aa26.8■■□□□ 1.88
Rpl28-201ENSMUST00000032597 Crocc2F6XLV1 1638 aa26.72■■□□□ 1.87
Rpl28-201ENSMUST00000032597 Il27Q8K3I6 234 aa26.71■■□□□ 1.87
Rpl28-201ENSMUST00000032597 Cep170Q6A065 1588 aa26.57■■□□□ 1.84
Rpl28-201ENSMUST00000032597 Ift140E9PY46 1464 aa26.56■■□□□ 1.84
Rpl28-201ENSMUST00000032597 PtprtQ99M80 1454 aa26.56■■□□□ 1.84
Rpl28-201ENSMUST00000032597 Ccdc136Q3TVA9 1136 aa26.54■■□□□ 1.84
Rpl28-201ENSMUST00000032597 PtprkP35822 1457 aa26.54■■□□□ 1.84
Rpl28-201ENSMUST00000032597 LrpprcQ6PB66 1392 aaKnown RBP26.47■■□□□ 1.83
Rpl28-201ENSMUST00000032597 Gm156Q58A37 223 aa26.47■■□□□ 1.83
Rpl28-201ENSMUST00000032597 Ccdc18Q640L5 1455 aa26.42■■□□□ 1.82
Rpl28-201ENSMUST00000032597 Gapvd1Q6PAR5 1458 aa26.42■■□□□ 1.82
Rpl28-201ENSMUST00000032597 Plekhg3Q4VAC9 1341 aa26.4■■□□□ 1.82
Rpl28-201ENSMUST00000032597 Pprc1Q6NZN1 1644 aa26.33■■□□□ 1.81
Rpl28-201ENSMUST00000032597 Rtl1Q7M732 1744 aa26.31■■□□□ 1.8
Rpl28-201ENSMUST00000032597 Camsap1A2AHC3 1581 aa26.29■■□□□ 1.8
Rpl28-201ENSMUST00000032597 Disp1Q3TDN0 1521 aa26.24■■□□□ 1.79
Rpl28-201ENSMUST00000032597 PogzQ8BZH4 1409 aaKnown RBP26.24■■□□□ 1.79
Rpl28-201ENSMUST00000032597 Setd1bQ8CFT2 1985 aa26.24■■□□□ 1.79
Rpl28-201ENSMUST00000032597 TnnQ80Z71 1560 aa26.16■■□□□ 1.78
Rpl28-201ENSMUST00000032597 Duox2A2AQ99 1517 aa26.12■■□□□ 1.77
Rpl28-201ENSMUST00000032597 Nup160Q9Z0W3 1402 aaKnown RBP26.12■■□□□ 1.77
Rpl28-201ENSMUST00000032597 Golga3P55937 1487 aa26.11■■□□□ 1.77
Rpl28-201ENSMUST00000032597 Cc2d2bA0A286YDU8 1405 aa26.1■■□□□ 1.77
Rpl28-201ENSMUST00000032597 Fgd6Q69ZL1 1399 aa26.08■■□□□ 1.77
Rpl28-201ENSMUST00000032597 AknaQ80VW7 1404 aa26.08■■□□□ 1.77
Rpl28-201ENSMUST00000032597 Rapgef2Q8CHG7 1496 aa26.08■■□□□ 1.77
Rpl28-201ENSMUST00000032597 Ppp1r18Q8BQ30 594 aa26.06■■□□□ 1.76
Rpl28-201ENSMUST00000032597 Pbrm1Q8BSQ9 1634 aaKnown RBP26.05■■□□□ 1.76
Rpl28-201ENSMUST00000032597 Samd9lQ69Z37 1561 aa26.04■■□□□ 1.76
Rpl28-201ENSMUST00000032597 Ythdc2B2RR83 1445 aaKnown RBP26.01■■□□□ 1.75
Rpl28-201ENSMUST00000032597 Abcc1O35379 1528 aa26.01■■□□□ 1.75
Rpl28-201ENSMUST00000032597 Top2aQ01320 1528 aaKnown RBP25.99■■□□□ 1.75
Rpl28-201ENSMUST00000032597 AqrQ8CFQ3 1481 aaKnown RBP25.95■■□□□ 1.74
Rpl28-201ENSMUST00000032597 Setbp1Q9Z180 1582 aa25.9■■□□□ 1.74
Rpl28-201ENSMUST00000032597 Chd1P40201 1711 aa25.89■■□□□ 1.74
Rpl28-201ENSMUST00000032597 Rad54l2Q99NG0 1466 aa25.89■■□□□ 1.73
Retrieved 100 of 22,080 RNA–protein pairs in 140.5 ms