RNA–Protein interactions for RNA: ENSMUST00000030013.11

Xpa-201, Transcript of DNA repair protein complementing XP-A cells homolog, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Xpa, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Xpa-201ENSMUST00000030013 Gm35339A0A140LHH9 1649 aa41.28■■■■■ 4.2
Xpa-201ENSMUST00000030013 NischQ80TM9 1593 aa40.33■■■■■ 4.05
Xpa-201ENSMUST00000030013 Abcc9P70170 1546 aa39.42■■■■□ 3.9
Xpa-201ENSMUST00000030013 Abcc8B2RUS7 1588 aa39.28■■■■□ 3.88
Xpa-201ENSMUST00000030013 ScribQ80U72 1612 aa38.49■■■■□ 3.75
Xpa-201ENSMUST00000030013 NacadQ5SWP3 1504 aa37.02■■■■□ 3.52
Xpa-201ENSMUST00000030013 Kdm5dQ62240 1548 aa36.94■■■■□ 3.5
Xpa-201ENSMUST00000030013 Dnajc5bQ9CQ94 199 aa36.56■■■■□ 3.44
Xpa-201ENSMUST00000030013 Sycp2Q9CUU3 1500 aa36.39■■■■□ 3.42
Xpa-201ENSMUST00000030013 BicraF8VPZ9 1578 aa36.12■■■■□ 3.37
Xpa-201ENSMUST00000030013 Dcaf1Q80TR8 1506 aa35.91■■■■□ 3.34
Xpa-201ENSMUST00000030013 Thoc2B1AZI6 1594 aaKnown RBP35.27■■■■□ 3.24
Xpa-201ENSMUST00000030013 Pds5bQ4VA53 1446 aaKnown RBP35.13■■■■□ 3.21
Xpa-201ENSMUST00000030013 Rb1cc1Q9ESK9 1588 aa35.07■■■■□ 3.2
Xpa-201ENSMUST00000030013 Cc2d2aQ8CFW7 1633 aa34.68■■■■□ 3.14
Xpa-201ENSMUST00000030013 Atad2bE9Q166 1460 aaKnown RBP34.65■■■■□ 3.14
Xpa-201ENSMUST00000030013 Baz1aO88379 1555 aa34.49■■■■□ 3.11
Xpa-201ENSMUST00000030013 Crybg2B7ZCC2 1516 aa34.45■■■■□ 3.11
Xpa-201ENSMUST00000030013 Ercc6F8VPZ5 1481 aa34.33■■■■□ 3.09
Xpa-201ENSMUST00000030013 Ccdc180J3QNE4 1664 aa34.32■■■■□ 3.08
Xpa-201ENSMUST00000030013 Fam135aQ6NS59 1506 aa34.25■■■■□ 3.07
Xpa-201ENSMUST00000030013 Smarca2Q6DIC0 1577 aa34.19■■■■□ 3.06
Xpa-201ENSMUST00000030013 Zcchc6Q5BLK4 1491 aaKnown RBP34.14■■■■□ 3.06
Xpa-201ENSMUST00000030013 Smarca4Q3TKT4 1613 aaKnown RBP34.03■■■■□ 3.04
Xpa-201ENSMUST00000030013 Iqgap2Q3UQ44 1575 aa33.98■■■■□ 3.03
Xpa-201ENSMUST00000030013 Rhox8Q6VSS7 320 aa33.91■■■■□ 3.02
Xpa-201ENSMUST00000030013 Dnajc5P60904 198 aa33.85■■■■□ 3.01
Xpa-201ENSMUST00000030013 Wdr62Q3U3T8 1523 aa33.84■■■■□ 3.01
Xpa-201ENSMUST00000030013 Frmpd1A2AKB4 1549 aa33.84■■■■□ 3.01
Xpa-201ENSMUST00000030013 Cecr2E9Q2Z1 1453 aa33.78■■■■□ 3
Xpa-201ENSMUST00000030013 Phldb1Q6PDH0 1371 aaKnown RBP33.78■■■■□ 3
Xpa-201ENSMUST00000030013 Baz1bQ9Z277 1479 aa33.66■■■□□ 2.98
Xpa-201ENSMUST00000030013 Ubl4bQ9CQ84 188 aa33.55■■■□□ 2.96
Xpa-201ENSMUST00000030013 Unc13aQ4KUS2 1712 aa33.45■■■□□ 2.94
Xpa-201ENSMUST00000030013 Mrc2Q64449 1479 aa33.42■■■□□ 2.94
Xpa-201ENSMUST00000030013 Trim41Q5NCC3 630 aa33.4■■■□□ 2.94
Xpa-201ENSMUST00000030013 Lrriq1Q0P5X1 1673 aa32.85■■■□□ 2.85
Xpa-201ENSMUST00000030013 CftrP26361 1476 aa32.75■■■□□ 2.83
Xpa-201ENSMUST00000030013 Cttnbp2B9EJA2 1648 aa32.71■■■□□ 2.83
Xpa-201ENSMUST00000030013 Synj1Q8CHC4 1574 aa32.63■■■□□ 2.81
Xpa-201ENSMUST00000030013 Rsf1E9PWW9 1441 aaKnown RBP32.61■■■□□ 2.81
Xpa-201ENSMUST00000030013 Kif21aQ9QXL2 1672 aa32.49■■■□□ 2.79
Xpa-201ENSMUST00000030013 Cux2P70298 1426 aa32.47■■■□□ 2.79
Xpa-201ENSMUST00000030013 Shroom2A2ALU4 1481 aa32.4■■■□□ 2.78
Xpa-201ENSMUST00000030013 Brd4Q9ESU6 1400 aaKnown RBP32.31■■■□□ 2.76
Xpa-201ENSMUST00000030013 Eif4g3Q80XI3 1579 aaKnown RBP32.3■■■□□ 2.76
Xpa-201ENSMUST00000030013 Kif15Q6P9L6 1387 aa32.27■■■□□ 2.76
Xpa-201ENSMUST00000030013 Col17a1Q07563 1470 aa32.21■■■□□ 2.75
Xpa-201ENSMUST00000030013 Rtl1Q7M732 1744 aa32.08■■■□□ 2.73
Xpa-201ENSMUST00000030013 Esf1Q3V1V3 845 aaKnown RBP32.05■■■□□ 2.72
Xpa-201ENSMUST00000030013 Npm1Q61937 292 aaKnown RBP32.01■■■□□ 2.71
Xpa-201ENSMUST00000030013 Lamc3Q9R0B6 1581 aa31.99■■■□□ 2.71
Xpa-201ENSMUST00000030013 Ccdc136Q3TVA9 1136 aa31.98■■■□□ 2.71
Xpa-201ENSMUST00000030013 Urb2E9Q7L1 1524 aaKnown RBP31.93■■■□□ 2.7
Xpa-201ENSMUST00000030013 Pabpn1Q8CCS6 302 aaKnown RBP31.91■■■□□ 2.7
Xpa-201ENSMUST00000030013 Top2bQ64511 1612 aa31.87■■■□□ 2.69
Xpa-201ENSMUST00000030013 Cep164Q5DU05 1446 aa31.83■■■□□ 2.69
Xpa-201ENSMUST00000030013 Plb1Q3TTY0 1478 aa31.82■■■□□ 2.68
Xpa-201ENSMUST00000030013 Dhx29Q6PGC1 1365 aaKnown RBP31.71■■■□□ 2.67
Xpa-201ENSMUST00000030013 Pelp1Q9DBD5 1123 aaKnown RBP31.62■■■□□ 2.65
Xpa-201ENSMUST00000030013 Zcchc11B2RX14 1644 aaKnown RBP31.55■■■□□ 2.64
Xpa-201ENSMUST00000030013 Crocc2F6XLV1 1638 aa31.55■■■□□ 2.64
Xpa-201ENSMUST00000030013 Il27Q8K3I6 234 aa31.52■■■□□ 2.64
Xpa-201ENSMUST00000030013 Rusc2Q80U22 1514 aa31.52■■■□□ 2.64
Xpa-201ENSMUST00000030013 LrpprcQ6PB66 1392 aaKnown RBP31.5■■■□□ 2.63
Xpa-201ENSMUST00000030013 Ccdc18Q640L5 1455 aa31.44■■■□□ 2.62
Xpa-201ENSMUST00000030013 Pcdh10E9PXQ7 1057 aa31.42■■■□□ 2.62
Xpa-201ENSMUST00000030013 Ift140E9PY46 1464 aa31.4■■■□□ 2.62
Xpa-201ENSMUST00000030013 TnnQ80Z71 1560 aa31.38■■■□□ 2.61
Xpa-201ENSMUST00000030013 Camsap1A2AHC3 1581 aa31.33■■■□□ 2.61
Xpa-201ENSMUST00000030013 PogzQ8BZH4 1409 aaKnown RBP31.24■■■□□ 2.59
Xpa-201ENSMUST00000030013 Setd1bQ8CFT2 1985 aa31.19■■■□□ 2.58
Xpa-201ENSMUST00000030013 Arhgef5E9Q7D5 1581 aa31.17■■■□□ 2.58
Xpa-201ENSMUST00000030013 Disp1Q3TDN0 1521 aa31.14■■■□□ 2.57
Xpa-201ENSMUST00000030013 Adgrl3Q80TS3 1537 aa31.12■■■□□ 2.57
Xpa-201ENSMUST00000030013 Duox2A2AQ99 1517 aa31.08■■■□□ 2.57
Xpa-201ENSMUST00000030013 Nup160Q9Z0W3 1402 aaKnown RBP30.98■■■□□ 2.55
Xpa-201ENSMUST00000030013 Golga3P55937 1487 aa30.97■■■□□ 2.55
Xpa-201ENSMUST00000030013 Ttbk1Q6PCN3 1308 aa30.96■■■□□ 2.55
Xpa-201ENSMUST00000030013 PtprkP35822 1457 aa30.95■■■□□ 2.55
Xpa-201ENSMUST00000030013 Gm156Q58A37 223 aa30.94■■■□□ 2.54
Xpa-201ENSMUST00000030013 Cep170Q6A065 1588 aa30.94■■■□□ 2.54
Xpa-201ENSMUST00000030013 Cc2d2bA0A286YDU8 1405 aa30.93■■■□□ 2.54
Xpa-201ENSMUST00000030013 PtprtQ99M80 1454 aa30.89■■■□□ 2.54
Xpa-201ENSMUST00000030013 Pbrm1Q8BSQ9 1634 aaKnown RBP30.89■■■□□ 2.54
Xpa-201ENSMUST00000030013 Samd9lQ69Z37 1561 aa30.88■■■□□ 2.53
Xpa-201ENSMUST00000030013 Gapvd1Q6PAR5 1458 aa30.86■■■□□ 2.53
Xpa-201ENSMUST00000030013 Grin2bQ01097 1482 aa30.81■■■□□ 2.52
Xpa-201ENSMUST00000030013 Cngb1E1AZ71 1325 aa30.8■■■□□ 2.52
Xpa-201ENSMUST00000030013 Fgd6Q69ZL1 1399 aa30.77■■■□□ 2.52
Xpa-201ENSMUST00000030013 Fmn1Q05860 1466 aa30.72■■■□□ 2.51
Xpa-201ENSMUST00000030013 Rad54l2Q99NG0 1466 aa30.7■■■□□ 2.5
Xpa-201ENSMUST00000030013 AqrQ8CFQ3 1481 aaKnown RBP30.69■■■□□ 2.5
Xpa-201ENSMUST00000030013 Pprc1Q6NZN1 1644 aa30.66■■■□□ 2.5
Xpa-201ENSMUST00000030013 Grin2aP35436 1464 aa30.63■■■□□ 2.49
Xpa-201ENSMUST00000030013 Magi3Q9EQJ9 1476 aa30.63■■■□□ 2.49
Xpa-201ENSMUST00000030013 Efcab5A0JP43 1406 aa30.62■■■□□ 2.49
Xpa-201ENSMUST00000030013 Abcc1O35379 1528 aa30.57■■■□□ 2.49
Xpa-201ENSMUST00000030013 Ythdc2B2RR83 1445 aaKnown RBP30.55■■■□□ 2.48
Xpa-201ENSMUST00000030013 AknaQ80VW7 1404 aa30.55■■■□□ 2.48
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms