RNA–Protein interactions for RNA: ENSMUST00000028599.7

Cstf3-201, Transcript of Cleavage stimulation factor subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cstf3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3-201ENSMUST00000028599 Gm35339A0A140LHH9 1649 aa28.68■■■□□ 2.18
Cstf3-201ENSMUST00000028599 NischQ80TM9 1593 aa28.27■■■□□ 2.12
Cstf3-201ENSMUST00000028599 Abcc9P70170 1546 aa27.38■■□□□ 1.97
Cstf3-201ENSMUST00000028599 Abcc8B2RUS7 1588 aa27.34■■□□□ 1.97
Cstf3-201ENSMUST00000028599 ScribQ80U72 1612 aa26.32■■□□□ 1.8
Cstf3-201ENSMUST00000028599 NacadQ5SWP3 1504 aa25.5■■□□□ 1.67
Cstf3-201ENSMUST00000028599 Kdm5dQ62240 1548 aa25.46■■□□□ 1.67
Cstf3-201ENSMUST00000028599 Dcaf1Q80TR8 1506 aa25.21■■□□□ 1.63
Cstf3-201ENSMUST00000028599 Sycp2Q9CUU3 1500 aa25.01■■□□□ 1.59
Cstf3-201ENSMUST00000028599 BicraF8VPZ9 1578 aa24.64■■□□□ 1.54
Cstf3-201ENSMUST00000028599 Rb1cc1Q9ESK9 1588 aa24.64■■□□□ 1.53
Cstf3-201ENSMUST00000028599 Rhox8Q6VSS7 320 aa24.37■■□□□ 1.49
Cstf3-201ENSMUST00000028599 Ccdc180J3QNE4 1664 aa24.37■■□□□ 1.49
Cstf3-201ENSMUST00000028599 Baz1aO88379 1555 aa24.31■■□□□ 1.48
Cstf3-201ENSMUST00000028599 Crybg2B7ZCC2 1516 aa24.26■■□□□ 1.47
Cstf3-201ENSMUST00000028599 Pds5bQ4VA53 1446 aaKnown RBP23.94■■□□□ 1.42
Cstf3-201ENSMUST00000028599 Zcchc6Q5BLK4 1491 aaKnown RBP23.89■■□□□ 1.41
Cstf3-201ENSMUST00000028599 Dnajc5bQ9CQ94 199 aa23.81■■□□□ 1.4
Cstf3-201ENSMUST00000028599 Atad2bE9Q166 1460 aaKnown RBP23.73■■□□□ 1.39
Cstf3-201ENSMUST00000028599 Thoc2B1AZI6 1594 aaKnown RBP23.73■■□□□ 1.39
Cstf3-201ENSMUST00000028599 Smarca2Q6DIC0 1577 aa23.61■■□□□ 1.37
Cstf3-201ENSMUST00000028599 Smarca4Q3TKT4 1613 aaKnown RBP23.55■■□□□ 1.36
Cstf3-201ENSMUST00000028599 Cecr2E9Q2Z1 1453 aa23.49■■□□□ 1.35
Cstf3-201ENSMUST00000028599 Ercc6F8VPZ5 1481 aa23.41■■□□□ 1.34
Cstf3-201ENSMUST00000028599 Iqgap2Q3UQ44 1575 aa23.41■■□□□ 1.34
Cstf3-201ENSMUST00000028599 Cc2d2aQ8CFW7 1633 aa23.32■■□□□ 1.32
Cstf3-201ENSMUST00000028599 Rtl1Q7M732 1744 aa23.27■■□□□ 1.32
Cstf3-201ENSMUST00000028599 Wdr62Q3U3T8 1523 aa23.21■■□□□ 1.31
Cstf3-201ENSMUST00000028599 Fam135aQ6NS59 1506 aa23.21■■□□□ 1.31
Cstf3-201ENSMUST00000028599 Frmpd1A2AKB4 1549 aa23.18■■□□□ 1.3
Cstf3-201ENSMUST00000028599 Phldb1Q6PDH0 1371 aaKnown RBP23.03■■□□□ 1.28
Cstf3-201ENSMUST00000028599 Baz1bQ9Z277 1479 aa22.99■■□□□ 1.27
Cstf3-201ENSMUST00000028599 CftrP26361 1476 aa22.98■■□□□ 1.27
Cstf3-201ENSMUST00000028599 Cttnbp2B9EJA2 1648 aa22.96■■□□□ 1.27
Cstf3-201ENSMUST00000028599 Brd4Q9ESU6 1400 aaKnown RBP22.93■■□□□ 1.26
Cstf3-201ENSMUST00000028599 Synj1Q8CHC4 1574 aa22.93■■□□□ 1.26
Cstf3-201ENSMUST00000028599 Unc13aQ4KUS2 1712 aa22.87■■□□□ 1.25
Cstf3-201ENSMUST00000028599 Ccdc136Q3TVA9 1136 aa22.81■■□□□ 1.24
Cstf3-201ENSMUST00000028599 Ubl4bQ9CQ84 188 aa22.77■■□□□ 1.24
Cstf3-201ENSMUST00000028599 Mrc2Q64449 1479 aa22.64■■□□□ 1.21
Cstf3-201ENSMUST00000028599 Trim41Q5NCC3 630 aa22.53■■□□□ 1.2
Cstf3-201ENSMUST00000028599 Esf1Q3V1V3 845 aaKnown RBP22.49■■□□□ 1.19
Cstf3-201ENSMUST00000028599 Rsf1E9PWW9 1441 aaKnown RBP22.4■■□□□ 1.18
Cstf3-201ENSMUST00000028599 Kif15Q6P9L6 1387 aa22.33■■□□□ 1.17
Cstf3-201ENSMUST00000028599 Lamc3Q9R0B6 1581 aa22.32■■□□□ 1.16
Cstf3-201ENSMUST00000028599 Cux2P70298 1426 aa22.32■■□□□ 1.16
Cstf3-201ENSMUST00000028599 Golga3P55937 1487 aa22.15■■□□□ 1.14
Cstf3-201ENSMUST00000028599 Top2bQ64511 1612 aa22.14■■□□□ 1.14
Cstf3-201ENSMUST00000028599 Kif21aQ9QXL2 1672 aa22.14■■□□□ 1.13
Cstf3-201ENSMUST00000028599 Lrriq1Q0P5X1 1673 aa22.13■■□□□ 1.13
Cstf3-201ENSMUST00000028599 TnnQ80Z71 1560 aa22.09■■□□□ 1.13
Cstf3-201ENSMUST00000028599 Npm1Q61937 292 aaKnown RBP22.06■■□□□ 1.12
Cstf3-201ENSMUST00000028599 Cep164Q5DU05 1446 aa22.02■■□□□ 1.12
Cstf3-201ENSMUST00000028599 Cngb1E1AZ71 1325 aa21.96■■□□□ 1.11
Cstf3-201ENSMUST00000028599 Ccdc18Q640L5 1455 aa21.95■■□□□ 1.1
Cstf3-201ENSMUST00000028599 Camsap1A2AHC3 1581 aa21.9■■□□□ 1.1
Cstf3-201ENSMUST00000028599 Fmn1Q05860 1466 aa21.89■■□□□ 1.1
Cstf3-201ENSMUST00000028599 Dhx29Q6PGC1 1365 aaKnown RBP21.85■■□□□ 1.09
Cstf3-201ENSMUST00000028599 Eif4g3Q80XI3 1579 aaKnown RBP21.84■■□□□ 1.09
Cstf3-201ENSMUST00000028599 LrpprcQ6PB66 1392 aaKnown RBP21.84■■□□□ 1.09
Cstf3-201ENSMUST00000028599 Il27Q8K3I6 234 aa21.81■■□□□ 1.08
Cstf3-201ENSMUST00000028599 Urb2E9Q7L1 1524 aaKnown RBP21.81■■□□□ 1.08
Cstf3-201ENSMUST00000028599 Plb1Q3TTY0 1478 aa21.77■■□□□ 1.08
Cstf3-201ENSMUST00000028599 Crocc2F6XLV1 1638 aa21.76■■□□□ 1.07
Cstf3-201ENSMUST00000028599 PogzQ8BZH4 1409 aaKnown RBP21.72■■□□□ 1.07
Cstf3-201ENSMUST00000028599 Grin2bQ01097 1482 aa21.61■■□□□ 1.05
Cstf3-201ENSMUST00000028599 Duox2A2AQ99 1517 aa21.61■■□□□ 1.05
Cstf3-201ENSMUST00000028599 Ift140E9PY46 1464 aa21.61■■□□□ 1.05
Cstf3-201ENSMUST00000028599 Shroom2A2ALU4 1481 aa21.54■■□□□ 1.04
Cstf3-201ENSMUST00000028599 Ccdc88bQ4QRL3 1481 aa21.54■■□□□ 1.04
Cstf3-201ENSMUST00000028599 Dnajc5P60904 198 aa21.51■■□□□ 1.03
Cstf3-201ENSMUST00000028599 Rusc2Q80U22 1514 aa21.51■■□□□ 1.03
Cstf3-201ENSMUST00000028599 Top2aQ01320 1528 aaKnown RBP21.49■■□□□ 1.03
Cstf3-201ENSMUST00000028599 Efcab5A0JP43 1406 aa21.48■■□□□ 1.03
Cstf3-201ENSMUST00000028599 Disp1Q3TDN0 1521 aa21.46■■□□□ 1.03
Cstf3-201ENSMUST00000028599 Samd9lQ69Z37 1561 aa21.44■■□□□ 1.02
Cstf3-201ENSMUST00000028599 NrkQ9R0G8 1455 aa21.41■■□□□ 1.02
Cstf3-201ENSMUST00000028599 Pbrm1Q8BSQ9 1634 aaKnown RBP21.4■■□□□ 1.02
Cstf3-201ENSMUST00000028599 Nup160Q9Z0W3 1402 aaKnown RBP21.37■■□□□ 1.01
Cstf3-201ENSMUST00000028599 Chic1Q8CBW7 227 aa21.37■■□□□ 1.01
Cstf3-201ENSMUST00000028599 Setd1bQ8CFT2 1985 aa21.35■■□□□ 1.01
Cstf3-201ENSMUST00000028599 Cc2d2bA0A286YDU8 1405 aa21.33■■□□□ 1.01
Cstf3-201ENSMUST00000028599 Shroom4Q1W617 1475 aa21.29■■□□□ 1
Cstf3-201ENSMUST00000028599 Pabpn1Q8CCS6 302 aaKnown RBP21.29■■□□□ 1
Cstf3-201ENSMUST00000028599 Rad54l2Q99NG0 1466 aa21.28■■□□□ 1
Cstf3-201ENSMUST00000028599 PtprkP35822 1457 aa21.25■□□□□ 0.99
Cstf3-201ENSMUST00000028599 Magi3Q9EQJ9 1476 aa21.25■□□□□ 0.99
Cstf3-201ENSMUST00000028599 Grin2aP35436 1464 aa21.24■□□□□ 0.99
Cstf3-201ENSMUST00000028599 Col17a1Q07563 1470 aa21.21■□□□□ 0.99
Cstf3-201ENSMUST00000028599 Gpatch8A2A6A1 1505 aa21.2■□□□□ 0.98
Cstf3-201ENSMUST00000028599 AqrQ8CFQ3 1481 aaKnown RBP21.19■□□□□ 0.98
Cstf3-201ENSMUST00000028599 SynmQ70IV5 1561 aa21.17■□□□□ 0.98
Cstf3-201ENSMUST00000028599 Pla2r1Q62028 1487 aa21.13■□□□□ 0.97
Cstf3-201ENSMUST00000028599 Pelp1Q9DBD5 1123 aaKnown RBP21.11■□□□□ 0.97
Cstf3-201ENSMUST00000028599 Fgd6Q69ZL1 1399 aa21.08■□□□□ 0.96
Cstf3-201ENSMUST00000028599 Zcchc11B2RX14 1644 aaKnown RBP21.06■□□□□ 0.96
Cstf3-201ENSMUST00000028599 HrcG5E8J6 738 aa21.02■□□□□ 0.96
Cstf3-201ENSMUST00000028599 Mroh2bQ7M6Y6 1581 aa21.01■□□□□ 0.95
Cstf3-201ENSMUST00000028599 Zeb1Q64318 1117 aa20.98■□□□□ 0.95
Cstf3-201ENSMUST00000028599 Npm2Q80W85 207 aa20.94■□□□□ 0.94
Retrieved 100 of 22,080 RNA–protein pairs in 170.1 ms