RNA–Protein interactions for RNA: ENSMUST00000025357.8

Ap3s1-201, Transcript of AP-3 complex subunit sigma-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ap3s1, Length 1,520 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1-201ENSMUST00000025357 Gm35339A0A140LHH9 1649 aa33.69■■■□□ 2.98
Ap3s1-201ENSMUST00000025357 NischQ80TM9 1593 aa33.27■■■□□ 2.92
Ap3s1-201ENSMUST00000025357 Abcc8B2RUS7 1588 aa32.26■■■□□ 2.76
Ap3s1-201ENSMUST00000025357 Abcc9P70170 1546 aa32.19■■■□□ 2.74
Ap3s1-201ENSMUST00000025357 ScribQ80U72 1612 aa31.15■■■□□ 2.58
Ap3s1-201ENSMUST00000025357 NacadQ5SWP3 1504 aa30.13■■■□□ 2.41
Ap3s1-201ENSMUST00000025357 Kdm5dQ62240 1548 aa30.09■■■□□ 2.41
Ap3s1-201ENSMUST00000025357 Dcaf1Q80TR8 1506 aa29.58■■■□□ 2.33
Ap3s1-201ENSMUST00000025357 Sycp2Q9CUU3 1500 aa29.58■■■□□ 2.33
Ap3s1-201ENSMUST00000025357 BicraF8VPZ9 1578 aa29.22■■■□□ 2.27
Ap3s1-201ENSMUST00000025357 Rb1cc1Q9ESK9 1588 aa28.93■■■□□ 2.22
Ap3s1-201ENSMUST00000025357 Dnajc5bQ9CQ94 199 aa28.76■■■□□ 2.19
Ap3s1-201ENSMUST00000025357 Rhox8Q6VSS7 320 aa28.63■■■□□ 2.17
Ap3s1-201ENSMUST00000025357 Baz1aO88379 1555 aa28.54■■■□□ 2.16
Ap3s1-201ENSMUST00000025357 Crybg2B7ZCC2 1516 aa28.49■■■□□ 2.15
Ap3s1-201ENSMUST00000025357 Ccdc180J3QNE4 1664 aa28.36■■■□□ 2.13
Ap3s1-201ENSMUST00000025357 Pds5bQ4VA53 1446 aaKnown RBP28.35■■■□□ 2.13
Ap3s1-201ENSMUST00000025357 Zcchc6Q5BLK4 1491 aaKnown RBP28.16■■■□□ 2.1
Ap3s1-201ENSMUST00000025357 Thoc2B1AZI6 1594 aaKnown RBP28.16■■■□□ 2.1
Ap3s1-201ENSMUST00000025357 Atad2bE9Q166 1460 aaKnown RBP28.1■■■□□ 2.09
Ap3s1-201ENSMUST00000025357 Cecr2E9Q2Z1 1453 aa27.81■■■□□ 2.04
Ap3s1-201ENSMUST00000025357 Smarca4Q3TKT4 1613 aaKnown RBP27.75■■■□□ 2.03
Ap3s1-201ENSMUST00000025357 Smarca2Q6DIC0 1577 aa27.74■■■□□ 2.03
Ap3s1-201ENSMUST00000025357 Cc2d2aQ8CFW7 1633 aa27.68■■■□□ 2.02
Ap3s1-201ENSMUST00000025357 Ercc6F8VPZ5 1481 aa27.67■■■□□ 2.02
Ap3s1-201ENSMUST00000025357 Iqgap2Q3UQ44 1575 aa27.63■■■□□ 2.01
Ap3s1-201ENSMUST00000025357 Fam135aQ6NS59 1506 aa27.49■■□□□ 1.99
Ap3s1-201ENSMUST00000025357 Frmpd1A2AKB4 1549 aa27.46■■□□□ 1.99
Ap3s1-201ENSMUST00000025357 Wdr62Q3U3T8 1523 aa27.44■■□□□ 1.98
Ap3s1-201ENSMUST00000025357 Phldb1Q6PDH0 1371 aaKnown RBP27.31■■□□□ 1.96
Ap3s1-201ENSMUST00000025357 CftrP26361 1476 aa27.1■■□□□ 1.93
Ap3s1-201ENSMUST00000025357 Ubl4bQ9CQ84 188 aa27.09■■□□□ 1.93
Ap3s1-201ENSMUST00000025357 Baz1bQ9Z277 1479 aa27.08■■□□□ 1.93
Ap3s1-201ENSMUST00000025357 Synj1Q8CHC4 1574 aa26.98■■□□□ 1.91
Ap3s1-201ENSMUST00000025357 Unc13aQ4KUS2 1712 aa26.92■■□□□ 1.9
Ap3s1-201ENSMUST00000025357 Cttnbp2B9EJA2 1648 aa26.91■■□□□ 1.9
Ap3s1-201ENSMUST00000025357 Brd4Q9ESU6 1400 aaKnown RBP26.9■■□□□ 1.9
Ap3s1-201ENSMUST00000025357 Ccdc136Q3TVA9 1136 aa26.9■■□□□ 1.9
Ap3s1-201ENSMUST00000025357 Rtl1Q7M732 1744 aa26.86■■□□□ 1.89
Ap3s1-201ENSMUST00000025357 Mrc2Q64449 1479 aa26.84■■□□□ 1.89
Ap3s1-201ENSMUST00000025357 Esf1Q3V1V3 845 aaKnown RBP26.51■■□□□ 1.83
Ap3s1-201ENSMUST00000025357 Cux2P70298 1426 aa26.44■■□□□ 1.82
Ap3s1-201ENSMUST00000025357 Rsf1E9PWW9 1441 aaKnown RBP26.42■■□□□ 1.82
Ap3s1-201ENSMUST00000025357 Kif15Q6P9L6 1387 aa26.42■■□□□ 1.82
Ap3s1-201ENSMUST00000025357 Trim41Q5NCC3 630 aa26.39■■□□□ 1.82
Ap3s1-201ENSMUST00000025357 Lamc3Q9R0B6 1581 aa26.27■■□□□ 1.8
Ap3s1-201ENSMUST00000025357 Lrriq1Q0P5X1 1673 aa26.21■■□□□ 1.79
Ap3s1-201ENSMUST00000025357 Kif21aQ9QXL2 1672 aa26.15■■□□□ 1.78
Ap3s1-201ENSMUST00000025357 Npm1Q61937 292 aaKnown RBP26.11■■□□□ 1.77
Ap3s1-201ENSMUST00000025357 Dnajc5P60904 198 aa26.01■■□□□ 1.75
Ap3s1-201ENSMUST00000025357 Cep164Q5DU05 1446 aa25.99■■□□□ 1.75
Ap3s1-201ENSMUST00000025357 Golga3P55937 1487 aa25.97■■□□□ 1.75
Ap3s1-201ENSMUST00000025357 TnnQ80Z71 1560 aa25.93■■□□□ 1.74
Ap3s1-201ENSMUST00000025357 Top2bQ64511 1612 aa25.9■■□□□ 1.74
Ap3s1-201ENSMUST00000025357 Dhx29Q6PGC1 1365 aaKnown RBP25.89■■□□□ 1.73
Ap3s1-201ENSMUST00000025357 Urb2E9Q7L1 1524 aaKnown RBP25.86■■□□□ 1.73
Ap3s1-201ENSMUST00000025357 Il27Q8K3I6 234 aa25.86■■□□□ 1.73
Ap3s1-201ENSMUST00000025357 Plb1Q3TTY0 1478 aa25.83■■□□□ 1.73
Ap3s1-201ENSMUST00000025357 Cngb1E1AZ71 1325 aa25.83■■□□□ 1.72
Ap3s1-201ENSMUST00000025357 LrpprcQ6PB66 1392 aaKnown RBP25.82■■□□□ 1.72
Ap3s1-201ENSMUST00000025357 Eif4g3Q80XI3 1579 aaKnown RBP25.82■■□□□ 1.72
Ap3s1-201ENSMUST00000025357 Ccdc18Q640L5 1455 aa25.81■■□□□ 1.72
Ap3s1-201ENSMUST00000025357 Camsap1A2AHC3 1581 aa25.76■■□□□ 1.71
Ap3s1-201ENSMUST00000025357 PogzQ8BZH4 1409 aaKnown RBP25.66■■□□□ 1.7
Ap3s1-201ENSMUST00000025357 Shroom2A2ALU4 1481 aa25.66■■□□□ 1.7
Ap3s1-201ENSMUST00000025357 Fmn1Q05860 1466 aa25.66■■□□□ 1.7
Ap3s1-201ENSMUST00000025357 Crocc2F6XLV1 1638 aa25.63■■□□□ 1.69
Ap3s1-201ENSMUST00000025357 Ift140E9PY46 1464 aa25.52■■□□□ 1.68
Ap3s1-201ENSMUST00000025357 Duox2A2AQ99 1517 aa25.51■■□□□ 1.67
Ap3s1-201ENSMUST00000025357 Grin2bQ01097 1482 aa25.45■■□□□ 1.67
Ap3s1-201ENSMUST00000025357 Rusc2Q80U22 1514 aa25.43■■□□□ 1.66
Ap3s1-201ENSMUST00000025357 Disp1Q3TDN0 1521 aa25.42■■□□□ 1.66
Ap3s1-201ENSMUST00000025357 Pabpn1Q8CCS6 302 aaKnown RBP25.39■■□□□ 1.66
Ap3s1-201ENSMUST00000025357 Col17a1Q07563 1470 aa25.37■■□□□ 1.65
Ap3s1-201ENSMUST00000025357 Ccdc88bQ4QRL3 1481 aa25.32■■□□□ 1.64
Ap3s1-201ENSMUST00000025357 Efcab5A0JP43 1406 aa25.31■■□□□ 1.64
Ap3s1-201ENSMUST00000025357 Samd9lQ69Z37 1561 aa25.29■■□□□ 1.64
Ap3s1-201ENSMUST00000025357 Nup160Q9Z0W3 1402 aaKnown RBP25.28■■□□□ 1.64
Ap3s1-201ENSMUST00000025357 Cc2d2bA0A286YDU8 1405 aa25.2■■□□□ 1.62
Ap3s1-201ENSMUST00000025357 Rad54l2Q99NG0 1466 aa25.19■■□□□ 1.62
Ap3s1-201ENSMUST00000025357 Chic1Q8CBW7 227 aa25.18■■□□□ 1.62
Ap3s1-201ENSMUST00000025357 Pelp1Q9DBD5 1123 aaKnown RBP25.18■■□□□ 1.62
Ap3s1-201ENSMUST00000025357 Top2aQ01320 1528 aaKnown RBP25.14■■□□□ 1.62
Ap3s1-201ENSMUST00000025357 NrkQ9R0G8 1455 aa25.14■■□□□ 1.61
Ap3s1-201ENSMUST00000025357 Setd1bQ8CFT2 1985 aa25.11■■□□□ 1.61
Ap3s1-201ENSMUST00000025357 Magi3Q9EQJ9 1476 aa25.11■■□□□ 1.61
Ap3s1-201ENSMUST00000025357 PtprkP35822 1457 aa25.1■■□□□ 1.61
Ap3s1-201ENSMUST00000025357 Pbrm1Q8BSQ9 1634 aaKnown RBP25.07■■□□□ 1.6
Ap3s1-201ENSMUST00000025357 Grin2aP35436 1464 aa25.07■■□□□ 1.6
Ap3s1-201ENSMUST00000025357 AqrQ8CFQ3 1481 aaKnown RBP25.01■■□□□ 1.59
Ap3s1-201ENSMUST00000025357 Shroom4Q1W617 1475 aa25■■□□□ 1.59
Ap3s1-201ENSMUST00000025357 Fgd6Q69ZL1 1399 aa24.97■■□□□ 1.59
Ap3s1-201ENSMUST00000025357 Zcchc11B2RX14 1644 aaKnown RBP24.97■■□□□ 1.59
Ap3s1-201ENSMUST00000025357 Pla2r1Q62028 1487 aa24.94■■□□□ 1.58
Ap3s1-201ENSMUST00000025357 SynmQ70IV5 1561 aa24.87■■□□□ 1.57
Ap3s1-201ENSMUST00000025357 Gpatch8A2A6A1 1505 aa24.86■■□□□ 1.57
Ap3s1-201ENSMUST00000025357 Adgrl3Q80TS3 1537 aa24.79■■□□□ 1.56
Ap3s1-201ENSMUST00000025357 Gm156Q58A37 223 aa24.79■■□□□ 1.56
Ap3s1-201ENSMUST00000025357 Gapvd1Q6PAR5 1458 aa24.78■■□□□ 1.56
Ap3s1-201ENSMUST00000025357 AknaQ80VW7 1404 aa24.74■■□□□ 1.55
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms