RNA–Protein interactions for RNA: ENSMUST00000024697.4

Hcfc1r1-201, Transcript of Host cell factor C1 regulator 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Hcfc1r1, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1-201ENSMUST00000024697 Gm35339A0A140LHH9 1649 aa29.84■■■□□ 2.37
Hcfc1r1-201ENSMUST00000024697 NischQ80TM9 1593 aa29.5■■■□□ 2.31
Hcfc1r1-201ENSMUST00000024697 Abcc9P70170 1546 aa28.58■■■□□ 2.17
Hcfc1r1-201ENSMUST00000024697 Abcc8B2RUS7 1588 aa28.41■■■□□ 2.14
Hcfc1r1-201ENSMUST00000024697 ScribQ80U72 1612 aa27.34■■□□□ 1.97
Hcfc1r1-201ENSMUST00000024697 Kdm5dQ62240 1548 aa26.47■■□□□ 1.83
Hcfc1r1-201ENSMUST00000024697 NacadQ5SWP3 1504 aa26.43■■□□□ 1.82
Hcfc1r1-201ENSMUST00000024697 Dcaf1Q80TR8 1506 aa26.18■■□□□ 1.78
Hcfc1r1-201ENSMUST00000024697 Sycp2Q9CUU3 1500 aa25.9■■□□□ 1.74
Hcfc1r1-201ENSMUST00000024697 Rb1cc1Q9ESK9 1588 aa25.78■■□□□ 1.72
Hcfc1r1-201ENSMUST00000024697 Rhox8Q6VSS7 320 aa25.71■■□□□ 1.71
Hcfc1r1-201ENSMUST00000024697 BicraF8VPZ9 1578 aa25.54■■□□□ 1.68
Hcfc1r1-201ENSMUST00000024697 Ccdc180J3QNE4 1664 aa25.47■■□□□ 1.67
Hcfc1r1-201ENSMUST00000024697 Baz1aO88379 1555 aa25.39■■□□□ 1.66
Hcfc1r1-201ENSMUST00000024697 Crybg2B7ZCC2 1516 aa25.15■■□□□ 1.62
Hcfc1r1-201ENSMUST00000024697 Zcchc6Q5BLK4 1491 aaKnown RBP24.99■■□□□ 1.59
Hcfc1r1-201ENSMUST00000024697 Pds5bQ4VA53 1446 aaKnown RBP24.72■■□□□ 1.55
Hcfc1r1-201ENSMUST00000024697 Rtl1Q7M732 1744 aa24.7■■□□□ 1.54
Hcfc1r1-201ENSMUST00000024697 Smarca2Q6DIC0 1577 aa24.67■■□□□ 1.54
Hcfc1r1-201ENSMUST00000024697 Atad2bE9Q166 1460 aaKnown RBP24.53■■□□□ 1.52
Hcfc1r1-201ENSMUST00000024697 Thoc2B1AZI6 1594 aaKnown RBP24.5■■□□□ 1.51
Hcfc1r1-201ENSMUST00000024697 Smarca4Q3TKT4 1613 aaKnown RBP24.5■■□□□ 1.51
Hcfc1r1-201ENSMUST00000024697 Cecr2E9Q2Z1 1453 aa24.45■■□□□ 1.51
Hcfc1r1-201ENSMUST00000024697 Dnajc5bQ9CQ94 199 aa24.39■■□□□ 1.49
Hcfc1r1-201ENSMUST00000024697 Iqgap2Q3UQ44 1575 aa24.34■■□□□ 1.49
Hcfc1r1-201ENSMUST00000024697 Ercc6F8VPZ5 1481 aa24.28■■□□□ 1.48
Hcfc1r1-201ENSMUST00000024697 Cc2d2aQ8CFW7 1633 aa24.14■■□□□ 1.46
Hcfc1r1-201ENSMUST00000024697 Wdr62Q3U3T8 1523 aa24.08■■□□□ 1.45
Hcfc1r1-201ENSMUST00000024697 Frmpd1A2AKB4 1549 aa24.01■■□□□ 1.43
Hcfc1r1-201ENSMUST00000024697 Cttnbp2B9EJA2 1648 aa24.01■■□□□ 1.43
Hcfc1r1-201ENSMUST00000024697 Ccdc136Q3TVA9 1136 aa24■■□□□ 1.43
Hcfc1r1-201ENSMUST00000024697 Synj1Q8CHC4 1574 aa23.99■■□□□ 1.43
Hcfc1r1-201ENSMUST00000024697 Fam135aQ6NS59 1506 aa23.97■■□□□ 1.43
Hcfc1r1-201ENSMUST00000024697 Brd4Q9ESU6 1400 aaKnown RBP23.94■■□□□ 1.42
Hcfc1r1-201ENSMUST00000024697 CftrP26361 1476 aa23.93■■□□□ 1.42
Hcfc1r1-201ENSMUST00000024697 Unc13aQ4KUS2 1712 aa23.87■■□□□ 1.41
Hcfc1r1-201ENSMUST00000024697 Phldb1Q6PDH0 1371 aaKnown RBP23.78■■□□□ 1.4
Hcfc1r1-201ENSMUST00000024697 Baz1bQ9Z277 1479 aa23.61■■□□□ 1.37
Hcfc1r1-201ENSMUST00000024697 Trim41Q5NCC3 630 aa23.59■■□□□ 1.37
Hcfc1r1-201ENSMUST00000024697 Esf1Q3V1V3 845 aaKnown RBP23.55■■□□□ 1.36
Hcfc1r1-201ENSMUST00000024697 Ubl4bQ9CQ84 188 aa23.55■■□□□ 1.36
Hcfc1r1-201ENSMUST00000024697 Mrc2Q64449 1479 aa23.4■■□□□ 1.34
Hcfc1r1-201ENSMUST00000024697 Rsf1E9PWW9 1441 aaKnown RBP23.29■■□□□ 1.32
Hcfc1r1-201ENSMUST00000024697 Kif15Q6P9L6 1387 aa23.23■■□□□ 1.31
Hcfc1r1-201ENSMUST00000024697 Lamc3Q9R0B6 1581 aa23.23■■□□□ 1.31
Hcfc1r1-201ENSMUST00000024697 Top2bQ64511 1612 aa23.22■■□□□ 1.31
Hcfc1r1-201ENSMUST00000024697 Golga3P55937 1487 aa23.2■■□□□ 1.3
Hcfc1r1-201ENSMUST00000024697 Cux2P70298 1426 aa23.16■■□□□ 1.3
Hcfc1r1-201ENSMUST00000024697 Cngb1E1AZ71 1325 aa23.14■■□□□ 1.3
Hcfc1r1-201ENSMUST00000024697 Kif21aQ9QXL2 1672 aa23.06■■□□□ 1.28
Hcfc1r1-201ENSMUST00000024697 TnnQ80Z71 1560 aa23.06■■□□□ 1.28
Hcfc1r1-201ENSMUST00000024697 Lrriq1Q0P5X1 1673 aa22.97■■□□□ 1.27
Hcfc1r1-201ENSMUST00000024697 Fmn1Q05860 1466 aa22.91■■□□□ 1.26
Hcfc1r1-201ENSMUST00000024697 Npm1Q61937 292 aaKnown RBP22.9■■□□□ 1.26
Hcfc1r1-201ENSMUST00000024697 Cep164Q5DU05 1446 aa22.88■■□□□ 1.25
Hcfc1r1-201ENSMUST00000024697 Ccdc18Q640L5 1455 aa22.87■■□□□ 1.25
Hcfc1r1-201ENSMUST00000024697 Camsap1A2AHC3 1581 aa22.87■■□□□ 1.25
Hcfc1r1-201ENSMUST00000024697 Il27Q8K3I6 234 aa22.81■■□□□ 1.24
Hcfc1r1-201ENSMUST00000024697 Crocc2F6XLV1 1638 aa22.68■■□□□ 1.22
Hcfc1r1-201ENSMUST00000024697 Dhx29Q6PGC1 1365 aaKnown RBP22.67■■□□□ 1.22
Hcfc1r1-201ENSMUST00000024697 LrpprcQ6PB66 1392 aaKnown RBP22.66■■□□□ 1.22
Hcfc1r1-201ENSMUST00000024697 Ccdc88bQ4QRL3 1481 aa22.65■■□□□ 1.22
Hcfc1r1-201ENSMUST00000024697 Eif4g3Q80XI3 1579 aaKnown RBP22.63■■□□□ 1.21
Hcfc1r1-201ENSMUST00000024697 Urb2E9Q7L1 1524 aaKnown RBP22.61■■□□□ 1.21
Hcfc1r1-201ENSMUST00000024697 Plb1Q3TTY0 1478 aa22.57■■□□□ 1.2
Hcfc1r1-201ENSMUST00000024697 PogzQ8BZH4 1409 aaKnown RBP22.57■■□□□ 1.2
Hcfc1r1-201ENSMUST00000024697 Top2aQ01320 1528 aaKnown RBP22.54■■□□□ 1.2
Hcfc1r1-201ENSMUST00000024697 Grin2bQ01097 1482 aa22.53■■□□□ 1.2
Hcfc1r1-201ENSMUST00000024697 Duox2A2AQ99 1517 aa22.48■■□□□ 1.19
Hcfc1r1-201ENSMUST00000024697 Chic1Q8CBW7 227 aa22.47■■□□□ 1.19
Hcfc1r1-201ENSMUST00000024697 Samd9lQ69Z37 1561 aa22.38■■□□□ 1.17
Hcfc1r1-201ENSMUST00000024697 Ift140E9PY46 1464 aa22.38■■□□□ 1.17
Hcfc1r1-201ENSMUST00000024697 NrkQ9R0G8 1455 aa22.32■■□□□ 1.16
Hcfc1r1-201ENSMUST00000024697 Rusc2Q80U22 1514 aa22.31■■□□□ 1.16
Hcfc1r1-201ENSMUST00000024697 Setd1bQ8CFT2 1985 aa22.31■■□□□ 1.16
Hcfc1r1-201ENSMUST00000024697 Efcab5A0JP43 1406 aa22.3■■□□□ 1.16
Hcfc1r1-201ENSMUST00000024697 Pbrm1Q8BSQ9 1634 aaKnown RBP22.29■■□□□ 1.16
Hcfc1r1-201ENSMUST00000024697 Shroom4Q1W617 1475 aa22.26■■□□□ 1.15
Hcfc1r1-201ENSMUST00000024697 Disp1Q3TDN0 1521 aa22.25■■□□□ 1.15
Hcfc1r1-201ENSMUST00000024697 PtprkP35822 1457 aa22.22■■□□□ 1.15
Hcfc1r1-201ENSMUST00000024697 HrcG5E8J6 738 aa22.19■■□□□ 1.14
Hcfc1r1-201ENSMUST00000024697 Rad54l2Q99NG0 1466 aa22.18■■□□□ 1.14
Hcfc1r1-201ENSMUST00000024697 Dnajc5P60904 198 aa22.17■■□□□ 1.14
Hcfc1r1-201ENSMUST00000024697 Nup160Q9Z0W3 1402 aaKnown RBP22.14■■□□□ 1.14
Hcfc1r1-201ENSMUST00000024697 SynmQ70IV5 1561 aa22.12■■□□□ 1.13
Hcfc1r1-201ENSMUST00000024697 Magi3Q9EQJ9 1476 aa22.11■■□□□ 1.13
Hcfc1r1-201ENSMUST00000024697 Grin2aP35436 1464 aa22.1■■□□□ 1.13
Hcfc1r1-201ENSMUST00000024697 Shroom2A2ALU4 1481 aa22.09■■□□□ 1.13
Hcfc1r1-201ENSMUST00000024697 Cc2d2bA0A286YDU8 1405 aa22.08■■□□□ 1.13
Hcfc1r1-201ENSMUST00000024697 Zeb1Q64318 1117 aa22.05■■□□□ 1.12
Hcfc1r1-201ENSMUST00000024697 Npm2Q80W85 207 aa22.04■■□□□ 1.12
Hcfc1r1-201ENSMUST00000024697 Gab3Q8BSM5 595 aa22.02■■□□□ 1.12
Hcfc1r1-201ENSMUST00000024697 Pla2r1Q62028 1487 aa22.02■■□□□ 1.12
Hcfc1r1-201ENSMUST00000024697 AqrQ8CFQ3 1481 aaKnown RBP22■■□□□ 1.11
Hcfc1r1-201ENSMUST00000024697 Gpatch8A2A6A1 1505 aa22■■□□□ 1.11
Hcfc1r1-201ENSMUST00000024697 Mroh2bQ7M6Y6 1581 aa21.95■■□□□ 1.1
Hcfc1r1-201ENSMUST00000024697 Rapgef2Q8CHG7 1496 aa21.94■■□□□ 1.1
Hcfc1r1-201ENSMUST00000024697 Pabpn1Q8CCS6 302 aaKnown RBP21.89■■□□□ 1.09
Hcfc1r1-201ENSMUST00000024697 Pelp1Q9DBD5 1123 aaKnown RBP21.88■■□□□ 1.09
Hcfc1r1-201ENSMUST00000024697 Abca16E9PWJ7 1678 aa21.86■■□□□ 1.09
Retrieved 100 of 22,080 RNA–protein pairs in 8.6 ms