RNA–Protein interactions for RNA: ENSMUST00000022471.11

Pbrm1-201, Transcript of Protein polybromo-1, mousemouse

TSL 5 BASIC

Gene Pbrm1, Length 5,871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pbrm1-201ENSMUST00000022471 Abcc9P70170 1546 aa9.67□□□□□ -0.86
Pbrm1-201ENSMUST00000022471 Gm35339A0A140LHH9 1649 aa9.64□□□□□ -0.87
Pbrm1-201ENSMUST00000022471 NischQ80TM9 1593 aa9.59□□□□□ -0.87
Pbrm1-201ENSMUST00000022471 Abcc8B2RUS7 1588 aa9.21□□□□□ -0.93
Pbrm1-201ENSMUST00000022471 NacadQ5SWP3 1504 aa9.1□□□□□ -0.95
Pbrm1-201ENSMUST00000022471 Pds5bQ4VA53 1446 aaKnown RBP8.94□□□□□ -0.98
Pbrm1-201ENSMUST00000022471 Ercc6F8VPZ5 1481 aa8.9□□□□□ -0.99
Pbrm1-201ENSMUST00000022471 Baz1bQ9Z277 1479 aa8.84□□□□□ -0.99
Pbrm1-201ENSMUST00000022471 ScribQ80U72 1612 aa8.81□□□□□ -1
Pbrm1-201ENSMUST00000022471 Dnajc5P60904 198 aa8.79□□□□□ -1
Pbrm1-201ENSMUST00000022471 Sycp2Q9CUU3 1500 aa8.75□□□□□ -1.01
Pbrm1-201ENSMUST00000022471 Kdm5dQ62240 1548 aa8.74□□□□□ -1.01
Pbrm1-201ENSMUST00000022471 Trim41Q5NCC3 630 aa8.67□□□□□ -1.02
Pbrm1-201ENSMUST00000022471 Rb1cc1Q9ESK9 1588 aa8.6□□□□□ -1.03
Pbrm1-201ENSMUST00000022471 Dcaf1Q80TR8 1506 aa8.6□□□□□ -1.03
Pbrm1-201ENSMUST00000022471 Atad2bE9Q166 1460 aaKnown RBP8.58□□□□□ -1.04
Pbrm1-201ENSMUST00000022471 Dnajc5bQ9CQ94 199 aa8.57□□□□□ -1.04
Pbrm1-201ENSMUST00000022471 Ubl4bQ9CQ84 188 aa8.57□□□□□ -1.04
Pbrm1-201ENSMUST00000022471 Ttbk1Q6PCN3 1308 aa8.52□□□□□ -1.05
Pbrm1-201ENSMUST00000022471 Phldb1Q6PDH0 1371 aaKnown RBP8.52□□□□□ -1.05
Pbrm1-201ENSMUST00000022471 Thoc2B1AZI6 1594 aaKnown RBP8.51□□□□□ -1.05
Pbrm1-201ENSMUST00000022471 Rhox8Q6VSS7 320 aa8.51□□□□□ -1.05
Pbrm1-201ENSMUST00000022471 Cc2d2aQ8CFW7 1633 aa8.46□□□□□ -1.06
Pbrm1-201ENSMUST00000022471 Fam135aQ6NS59 1506 aa8.4□□□□□ -1.06
Pbrm1-201ENSMUST00000022471 Mrc2Q64449 1479 aa8.4□□□□□ -1.07
Pbrm1-201ENSMUST00000022471 Pabpn1Q8CCS6 302 aaKnown RBP8.39□□□□□ -1.07
Pbrm1-201ENSMUST00000022471 Smarca2Q6DIC0 1577 aa8.39□□□□□ -1.07
Pbrm1-201ENSMUST00000022471 Zcchc6Q5BLK4 1491 aaKnown RBP8.38□□□□□ -1.07
Pbrm1-201ENSMUST00000022471 Pelp1Q9DBD5 1123 aaKnown RBP8.37□□□□□ -1.07
Pbrm1-201ENSMUST00000022471 Crybg2B7ZCC2 1516 aa8.34□□□□□ -1.08
Pbrm1-201ENSMUST00000022471 BicraF8VPZ9 1578 aa8.33□□□□□ -1.08
Pbrm1-201ENSMUST00000022471 Npm1Q61937 292 aaKnown RBP8.33□□□□□ -1.08
Pbrm1-201ENSMUST00000022471 Rsf1E9PWW9 1441 aaKnown RBP8.32□□□□□ -1.08
Pbrm1-201ENSMUST00000022471 Esf1Q3V1V3 845 aaKnown RBP8.31□□□□□ -1.08
Pbrm1-201ENSMUST00000022471 Plekhg3Q4VAC9 1341 aa8.29□□□□□ -1.08
Pbrm1-201ENSMUST00000022471 Smarca4Q3TKT4 1613 aaKnown RBP8.28□□□□□ -1.08
Pbrm1-201ENSMUST00000022471 Baz1aO88379 1555 aa8.24□□□□□ -1.09
Pbrm1-201ENSMUST00000022471 Iqgap2Q3UQ44 1575 aa8.23□□□□□ -1.09
Pbrm1-201ENSMUST00000022471 Top2bQ64511 1612 aa8.21□□□□□ -1.09
Pbrm1-201ENSMUST00000022471 Ccdc180J3QNE4 1664 aa8.21□□□□□ -1.1
Pbrm1-201ENSMUST00000022471 Shroom2A2ALU4 1481 aa8.2□□□□□ -1.1
Pbrm1-201ENSMUST00000022471 Cep164Q5DU05 1446 aa8.19□□□□□ -1.1
Pbrm1-201ENSMUST00000022471 Wdr62Q3U3T8 1523 aa8.16□□□□□ -1.1
Pbrm1-201ENSMUST00000022471 Zcchc11B2RX14 1644 aaKnown RBP8.09□□□□□ -1.11
Pbrm1-201ENSMUST00000022471 Frmpd1A2AKB4 1549 aa8.08□□□□□ -1.12
Pbrm1-201ENSMUST00000022471 Brd4Q9ESU6 1400 aaKnown RBP8.05□□□□□ -1.12
Pbrm1-201ENSMUST00000022471 Kif15Q6P9L6 1387 aa8.04□□□□□ -1.12
Pbrm1-201ENSMUST00000022471 Eif4g3Q80XI3 1579 aaKnown RBP8.04□□□□□ -1.12
Pbrm1-201ENSMUST00000022471 Ccdc18Q640L5 1455 aa8.03□□□□□ -1.12
Pbrm1-201ENSMUST00000022471 Cux2P70298 1426 aa8.03□□□□□ -1.12
Pbrm1-201ENSMUST00000022471 Arhgef5E9Q7D5 1581 aa8.02□□□□□ -1.13
Pbrm1-201ENSMUST00000022471 Ppp1r18Q8BQ30 594 aa8.01□□□□□ -1.13
Pbrm1-201ENSMUST00000022471 Col17a1Q07563 1470 aa8□□□□□ -1.13
Pbrm1-201ENSMUST00000022471 Cecr2E9Q2Z1 1453 aa7.98□□□□□ -1.13
Pbrm1-201ENSMUST00000022471 Lrriq1Q0P5X1 1673 aa7.97□□□□□ -1.13
Pbrm1-201ENSMUST00000022471 Cyb5rlB1AS42 316 aa7.96□□□□□ -1.14
Pbrm1-201ENSMUST00000022471 Il27Q8K3I6 234 aa7.95□□□□□ -1.14
Pbrm1-201ENSMUST00000022471 Ift140E9PY46 1464 aa7.94□□□□□ -1.14
Pbrm1-201ENSMUST00000022471 PtprkP35822 1457 aa7.92□□□□□ -1.14
Pbrm1-201ENSMUST00000022471 Adgrl3Q80TS3 1537 aa7.92□□□□□ -1.14
Pbrm1-201ENSMUST00000022471 Urb2E9Q7L1 1524 aaKnown RBP7.91□□□□□ -1.14
Pbrm1-201ENSMUST00000022471 Zeb1Q64318 1117 aa7.9□□□□□ -1.15
Pbrm1-201ENSMUST00000022471 Cttnbp2B9EJA2 1648 aa7.89□□□□□ -1.15
Pbrm1-201ENSMUST00000022471 Plb1Q3TTY0 1478 aa7.89□□□□□ -1.15
Pbrm1-201ENSMUST00000022471 MlecQ6ZQI3 291 aaKnown RBP7.85□□□□□ -1.15
Pbrm1-201ENSMUST00000022471 Cc2d2bA0A286YDU8 1405 aa7.83□□□□□ -1.16
Pbrm1-201ENSMUST00000022471 Fgd6Q69ZL1 1399 aa7.83□□□□□ -1.16
Pbrm1-201ENSMUST00000022471 Dhx29Q6PGC1 1365 aaKnown RBP7.81□□□□□ -1.16
Pbrm1-201ENSMUST00000022471 Fbxo41Q6NS60 873 aa7.79□□□□□ -1.16
Pbrm1-201ENSMUST00000022471 Kif21aQ9QXL2 1672 aa7.78□□□□□ -1.16
Pbrm1-201ENSMUST00000022471 Rusc2Q80U22 1514 aa7.78□□□□□ -1.16
Pbrm1-201ENSMUST00000022471 Safb2Q80YR5 991 aaKnown RBP7.78□□□□□ -1.16
Pbrm1-201ENSMUST00000022471 AknaQ80VW7 1404 aa7.78□□□□□ -1.16
Pbrm1-201ENSMUST00000022471 CadpsQ80TJ1 1355 aa7.77□□□□□ -1.17
Pbrm1-201ENSMUST00000022471 Arhgef11Q68FM7 1552 aa7.77□□□□□ -1.17
Pbrm1-201ENSMUST00000022471 Crocc2F6XLV1 1638 aa7.76□□□□□ -1.17
Pbrm1-201ENSMUST00000022471 Plppr3Q7TPB0 716 aa7.76□□□□□ -1.17
Pbrm1-201ENSMUST00000022471 LrpprcQ6PB66 1392 aaKnown RBP7.76□□□□□ -1.17
Pbrm1-201ENSMUST00000022471 CftrP26361 1476 aa7.76□□□□□ -1.17
Pbrm1-201ENSMUST00000022471 Gapvd1Q6PAR5 1458 aa7.76□□□□□ -1.17
Pbrm1-201ENSMUST00000022471 Cngb1E1AZ71 1325 aa7.76□□□□□ -1.17
Pbrm1-201ENSMUST00000022471 Pbrm1Q8BSQ9 1634 aaKnown RBP7.74□□□□□ -1.17
Pbrm1-201ENSMUST00000022471 Gm156Q58A37 223 aa7.73□□□□□ -1.17
Pbrm1-201ENSMUST00000022471 PtprtQ99M80 1454 aa7.73□□□□□ -1.17
Pbrm1-201ENSMUST00000022471 Synj1Q8CHC4 1574 aa7.72□□□□□ -1.17
Pbrm1-201ENSMUST00000022471 Soga1E1U8D0 1418 aa7.72□□□□□ -1.17
Pbrm1-201ENSMUST00000022471 Lamc3Q9R0B6 1581 aa7.72□□□□□ -1.17
Pbrm1-201ENSMUST00000022471 Golga3P55937 1487 aa7.71□□□□□ -1.17
Pbrm1-201ENSMUST00000022471 Ifnlr1Q8CGK5 535 aa7.71□□□□□ -1.18
Pbrm1-201ENSMUST00000022471 Cep170Q6A065 1588 aa7.69□□□□□ -1.18
Pbrm1-201ENSMUST00000022471 Pcdh10E9PXQ7 1057 aa7.69□□□□□ -1.18
Pbrm1-201ENSMUST00000022471 Ccdc136Q3TVA9 1136 aa7.69□□□□□ -1.18
Pbrm1-201ENSMUST00000022471 Unc13aQ4KUS2 1712 aa7.68□□□□□ -1.18
Pbrm1-201ENSMUST00000022471 Fbln2P37889 1221 aa7.67□□□□□ -1.18
Pbrm1-201ENSMUST00000022471 MyclP10166 368 aa7.64□□□□□ -1.19
Pbrm1-201ENSMUST00000022471 Rtl1Q7M732 1744 aa7.63□□□□□ -1.19
Pbrm1-201ENSMUST00000022471 Top2aQ01320 1528 aaKnown RBP7.62□□□□□ -1.19
Pbrm1-201ENSMUST00000022471 AqrQ8CFQ3 1481 aaKnown RBP7.62□□□□□ -1.19
Pbrm1-201ENSMUST00000022471 Kif7B7ZNG0 1348 aa7.62□□□□□ -1.19
Pbrm1-201ENSMUST00000022471 Npm2Q80W85 207 aa7.62□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms