RNA–Protein interactions for RNA: ENSMUST00000022196.4

Ap3b1-201, Transcript of AP-3 complex subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ap3b1, Length 4,021 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3b1-201ENSMUST00000022196 Gm35339A0A140LHH9 1649 aa18.21■□□□□ 0.51
Ap3b1-201ENSMUST00000022196 NischQ80TM9 1593 aa17.93■□□□□ 0.46
Ap3b1-201ENSMUST00000022196 Abcc8B2RUS7 1588 aa17.38■□□□□ 0.37
Ap3b1-201ENSMUST00000022196 Abcc9P70170 1546 aa17.33■□□□□ 0.37
Ap3b1-201ENSMUST00000022196 ScribQ80U72 1612 aa16.86■□□□□ 0.29
Ap3b1-201ENSMUST00000022196 NacadQ5SWP3 1504 aa16.27■□□□□ 0.19
Ap3b1-201ENSMUST00000022196 Kdm5dQ62240 1548 aa16.26■□□□□ 0.19
Ap3b1-201ENSMUST00000022196 Sycp2Q9CUU3 1500 aa15.97■□□□□ 0.15
Ap3b1-201ENSMUST00000022196 Dcaf1Q80TR8 1506 aa15.92■□□□□ 0.14
Ap3b1-201ENSMUST00000022196 BicraF8VPZ9 1578 aa15.8■□□□□ 0.12
Ap3b1-201ENSMUST00000022196 Rb1cc1Q9ESK9 1588 aa15.62■□□□□ 0.09
Ap3b1-201ENSMUST00000022196 Dnajc5bQ9CQ94 199 aa15.61■□□□□ 0.09
Ap3b1-201ENSMUST00000022196 Rhox8Q6VSS7 320 aa15.39■□□□□ 0.05
Ap3b1-201ENSMUST00000022196 Baz1aO88379 1555 aa15.38■□□□□ 0.05
Ap3b1-201ENSMUST00000022196 Pds5bQ4VA53 1446 aaKnown RBP15.33■□□□□ 0.04
Ap3b1-201ENSMUST00000022196 Ccdc180J3QNE4 1664 aa15.31■□□□□ 0.04
Ap3b1-201ENSMUST00000022196 Crybg2B7ZCC2 1516 aa15.3■□□□□ 0.04
Ap3b1-201ENSMUST00000022196 Thoc2B1AZI6 1594 aaKnown RBP15.28■□□□□ 0.04
Ap3b1-201ENSMUST00000022196 Zcchc6Q5BLK4 1491 aaKnown RBP15.2■□□□□ 0.02
Ap3b1-201ENSMUST00000022196 Atad2bE9Q166 1460 aaKnown RBP15.16■□□□□ 0.02
Ap3b1-201ENSMUST00000022196 Cc2d2aQ8CFW7 1633 aa15.04■□□□□ -0
Ap3b1-201ENSMUST00000022196 Rtl1Q7M732 1744 aa15.04■□□□□ -0
Ap3b1-201ENSMUST00000022196 Ercc6F8VPZ5 1481 aa15.01□□□□□ -0.01
Ap3b1-201ENSMUST00000022196 Smarca2Q6DIC0 1577 aa15□□□□□ -0.01
Ap3b1-201ENSMUST00000022196 Smarca4Q3TKT4 1613 aaKnown RBP15□□□□□ -0.01
Ap3b1-201ENSMUST00000022196 Cecr2E9Q2Z1 1453 aa14.97□□□□□ -0.01
Ap3b1-201ENSMUST00000022196 Iqgap2Q3UQ44 1575 aa14.95□□□□□ -0.02
Ap3b1-201ENSMUST00000022196 Fam135aQ6NS59 1506 aa14.89□□□□□ -0.03
Ap3b1-201ENSMUST00000022196 Wdr62Q3U3T8 1523 aa14.84□□□□□ -0.03
Ap3b1-201ENSMUST00000022196 Frmpd1A2AKB4 1549 aa14.83□□□□□ -0.03
Ap3b1-201ENSMUST00000022196 Phldb1Q6PDH0 1371 aaKnown RBP14.75□□□□□ -0.05
Ap3b1-201ENSMUST00000022196 Ubl4bQ9CQ84 188 aa14.65□□□□□ -0.06
Ap3b1-201ENSMUST00000022196 Unc13aQ4KUS2 1712 aa14.65□□□□□ -0.06
Ap3b1-201ENSMUST00000022196 Baz1bQ9Z277 1479 aa14.63□□□□□ -0.07
Ap3b1-201ENSMUST00000022196 CftrP26361 1476 aa14.57□□□□□ -0.08
Ap3b1-201ENSMUST00000022196 Synj1Q8CHC4 1574 aa14.55□□□□□ -0.08
Ap3b1-201ENSMUST00000022196 Mrc2Q64449 1479 aa14.55□□□□□ -0.08
Ap3b1-201ENSMUST00000022196 Cttnbp2B9EJA2 1648 aa14.54□□□□□ -0.08
Ap3b1-201ENSMUST00000022196 Brd4Q9ESU6 1400 aaKnown RBP14.47□□□□□ -0.09
Ap3b1-201ENSMUST00000022196 Ccdc136Q3TVA9 1136 aa14.45□□□□□ -0.1
Ap3b1-201ENSMUST00000022196 Esf1Q3V1V3 845 aaKnown RBP14.31□□□□□ -0.12
Ap3b1-201ENSMUST00000022196 Cux2P70298 1426 aa14.27□□□□□ -0.12
Ap3b1-201ENSMUST00000022196 Lrriq1Q0P5X1 1673 aa14.26□□□□□ -0.13
Ap3b1-201ENSMUST00000022196 Kif15Q6P9L6 1387 aa14.25□□□□□ -0.13
Ap3b1-201ENSMUST00000022196 Trim41Q5NCC3 630 aa14.25□□□□□ -0.13
Ap3b1-201ENSMUST00000022196 Rsf1E9PWW9 1441 aaKnown RBP14.25□□□□□ -0.13
Ap3b1-201ENSMUST00000022196 Kif21aQ9QXL2 1672 aa14.21□□□□□ -0.13
Ap3b1-201ENSMUST00000022196 Dnajc5P60904 198 aa14.18□□□□□ -0.14
Ap3b1-201ENSMUST00000022196 Lamc3Q9R0B6 1581 aa14.17□□□□□ -0.14
Ap3b1-201ENSMUST00000022196 Npm1Q61937 292 aaKnown RBP14.1□□□□□ -0.15
Ap3b1-201ENSMUST00000022196 Eif4g3Q80XI3 1579 aaKnown RBP14.04□□□□□ -0.16
Ap3b1-201ENSMUST00000022196 Cep164Q5DU05 1446 aa14.03□□□□□ -0.16
Ap3b1-201ENSMUST00000022196 Urb2E9Q7L1 1524 aaKnown RBP13.98□□□□□ -0.17
Ap3b1-201ENSMUST00000022196 Il27Q8K3I6 234 aa13.98□□□□□ -0.17
Ap3b1-201ENSMUST00000022196 TnnQ80Z71 1560 aa13.97□□□□□ -0.17
Ap3b1-201ENSMUST00000022196 Dhx29Q6PGC1 1365 aaKnown RBP13.96□□□□□ -0.17
Ap3b1-201ENSMUST00000022196 Plb1Q3TTY0 1478 aa13.96□□□□□ -0.18
Ap3b1-201ENSMUST00000022196 Top2bQ64511 1612 aa13.95□□□□□ -0.18
Ap3b1-201ENSMUST00000022196 Ccdc18Q640L5 1455 aa13.94□□□□□ -0.18
Ap3b1-201ENSMUST00000022196 Golga3P55937 1487 aa13.93□□□□□ -0.18
Ap3b1-201ENSMUST00000022196 Shroom2A2ALU4 1481 aa13.92□□□□□ -0.18
Ap3b1-201ENSMUST00000022196 Cngb1E1AZ71 1325 aa13.91□□□□□ -0.18
Ap3b1-201ENSMUST00000022196 LrpprcQ6PB66 1392 aaKnown RBP13.91□□□□□ -0.18
Ap3b1-201ENSMUST00000022196 Camsap1A2AHC3 1581 aa13.91□□□□□ -0.18
Ap3b1-201ENSMUST00000022196 Crocc2F6XLV1 1638 aa13.89□□□□□ -0.19
Ap3b1-201ENSMUST00000022196 HrcG5E8J6 738 aa13.88□□□□□ -0.19
Ap3b1-201ENSMUST00000022196 PogzQ8BZH4 1409 aaKnown RBP13.82□□□□□ -0.2
Ap3b1-201ENSMUST00000022196 Fmn1Q05860 1466 aa13.79□□□□□ -0.2
Ap3b1-201ENSMUST00000022196 Ift140E9PY46 1464 aa13.79□□□□□ -0.2
Ap3b1-201ENSMUST00000022196 Rusc2Q80U22 1514 aa13.78□□□□□ -0.2
Ap3b1-201ENSMUST00000022196 Col17a1Q07563 1470 aa13.78□□□□□ -0.2
Ap3b1-201ENSMUST00000022196 Pabpn1Q8CCS6 302 aaKnown RBP13.77□□□□□ -0.2
Ap3b1-201ENSMUST00000022196 Duox2A2AQ99 1517 aa13.76□□□□□ -0.21
Ap3b1-201ENSMUST00000022196 Grin2bQ01097 1482 aa13.71□□□□□ -0.22
Ap3b1-201ENSMUST00000022196 Pelp1Q9DBD5 1123 aaKnown RBP13.7□□□□□ -0.22
Ap3b1-201ENSMUST00000022196 Disp1Q3TDN0 1521 aa13.7□□□□□ -0.22
Ap3b1-201ENSMUST00000022196 Ehmt2Q9Z148 1263 aaKnown RBP13.69□□□□□ -0.22
Ap3b1-201ENSMUST00000022196 Samd9lQ69Z37 1561 aa13.67□□□□□ -0.22
Ap3b1-201ENSMUST00000022196 Setd1bQ8CFT2 1985 aa13.66□□□□□ -0.22
Ap3b1-201ENSMUST00000022196 Nup160Q9Z0W3 1402 aaKnown RBP13.63□□□□□ -0.23
Ap3b1-201ENSMUST00000022196 Efcab5A0JP43 1406 aa13.6□□□□□ -0.23
Ap3b1-201ENSMUST00000022196 Pbrm1Q8BSQ9 1634 aaKnown RBP13.6□□□□□ -0.23
Ap3b1-201ENSMUST00000022196 Cc2d2bA0A286YDU8 1405 aa13.59□□□□□ -0.23
Ap3b1-201ENSMUST00000022196 Rad54l2Q99NG0 1466 aa13.59□□□□□ -0.23
Ap3b1-201ENSMUST00000022196 Zcchc11B2RX14 1644 aaKnown RBP13.58□□□□□ -0.24
Ap3b1-201ENSMUST00000022196 Ccdc88bQ4QRL3 1481 aa13.57□□□□□ -0.24
Ap3b1-201ENSMUST00000022196 Grin2aP35436 1464 aa13.54□□□□□ -0.24
Ap3b1-201ENSMUST00000022196 Magi3Q9EQJ9 1476 aa13.54□□□□□ -0.24
Ap3b1-201ENSMUST00000022196 Top2aQ01320 1528 aaKnown RBP13.52□□□□□ -0.25
Ap3b1-201ENSMUST00000022196 AqrQ8CFQ3 1481 aaKnown RBP13.51□□□□□ -0.25
Ap3b1-201ENSMUST00000022196 NrkQ9R0G8 1455 aa13.5□□□□□ -0.25
Ap3b1-201ENSMUST00000022196 PtprkP35822 1457 aa13.48□□□□□ -0.25
Ap3b1-201ENSMUST00000022196 Fgd6Q69ZL1 1399 aa13.48□□□□□ -0.25
Ap3b1-201ENSMUST00000022196 Chic1Q8CBW7 227 aa13.47□□□□□ -0.25
Ap3b1-201ENSMUST00000022196 Adgrl3Q80TS3 1537 aa13.45□□□□□ -0.26
Ap3b1-201ENSMUST00000022196 Shroom4Q1W617 1475 aa13.44□□□□□ -0.26
Ap3b1-201ENSMUST00000022196 Pla2r1Q62028 1487 aa13.44□□□□□ -0.26
Ap3b1-201ENSMUST00000022196 Cep170Q6A065 1588 aa13.44□□□□□ -0.26
Ap3b1-201ENSMUST00000022196 Gapvd1Q6PAR5 1458 aa13.43□□□□□ -0.26
Ap3b1-201ENSMUST00000022196 SynmQ70IV5 1561 aa13.42□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms