RNA–Protein interactions for RNA: ENSMUST00000021880.9

Ctla2a-201, Transcript of Protein CTLA-2-alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctla2a, Length 1,373 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2a-201ENSMUST00000021880 Gm35339A0A140LHH9 1649 aa39.92■■■■□ 3.98
Ctla2a-201ENSMUST00000021880 NischQ80TM9 1593 aa39.37■■■■□ 3.89
Ctla2a-201ENSMUST00000021880 Abcc9P70170 1546 aa38.11■■■■□ 3.69
Ctla2a-201ENSMUST00000021880 Abcc8B2RUS7 1588 aa38.04■■■■□ 3.68
Ctla2a-201ENSMUST00000021880 ScribQ80U72 1612 aa36.62■■■■□ 3.45
Ctla2a-201ENSMUST00000021880 NacadQ5SWP3 1504 aa35.55■■■■□ 3.28
Ctla2a-201ENSMUST00000021880 Kdm5dQ62240 1548 aa35.44■■■■□ 3.26
Ctla2a-201ENSMUST00000021880 Dcaf1Q80TR8 1506 aa35.1■■■■□ 3.21
Ctla2a-201ENSMUST00000021880 Sycp2Q9CUU3 1500 aa34.82■■■■□ 3.17
Ctla2a-201ENSMUST00000021880 Mapk8ip2Q9ERE9 830 aa34.66■■■■□ 3.14
Ctla2a-201ENSMUST00000021880 Chic1Q8CBW7 227 aa34.36■■■■□ 3.09
Ctla2a-201ENSMUST00000021880 Rb1cc1Q9ESK9 1588 aa34.32■■■■□ 3.08
Ctla2a-201ENSMUST00000021880 BicraF8VPZ9 1578 aa34.29■■■■□ 3.08
Ctla2a-201ENSMUST00000021880 Rhox8Q6VSS7 320 aa34.01■■■■□ 3.04
Ctla2a-201ENSMUST00000021880 Ccdc180J3QNE4 1664 aa33.97■■■■□ 3.03
Ctla2a-201ENSMUST00000021880 Baz1aO88379 1555 aa33.86■■■■□ 3.01
Ctla2a-201ENSMUST00000021880 Crybg2B7ZCC2 1516 aa33.8■■■■□ 3
Ctla2a-201ENSMUST00000021880 Pds5bQ4VA53 1446 aaKnown RBP33.42■■■□□ 2.94
Ctla2a-201ENSMUST00000021880 Zcchc6Q5BLK4 1491 aaKnown RBP33.31■■■□□ 2.92
Ctla2a-201ENSMUST00000021880 Dnajc5bQ9CQ94 199 aa33.16■■■□□ 2.9
Ctla2a-201ENSMUST00000021880 Atad2bE9Q166 1460 aaKnown RBP33.09■■■□□ 2.89
Ctla2a-201ENSMUST00000021880 Thoc2B1AZI6 1594 aaKnown RBP33.07■■■□□ 2.89
Ctla2a-201ENSMUST00000021880 Smarca2Q6DIC0 1577 aa32.86■■■□□ 2.85
Ctla2a-201ENSMUST00000021880 Smarca4Q3TKT4 1613 aaKnown RBP32.83■■■□□ 2.85
Ctla2a-201ENSMUST00000021880 Ercc6F8VPZ5 1481 aa32.71■■■□□ 2.83
Ctla2a-201ENSMUST00000021880 Cecr2E9Q2Z1 1453 aa32.65■■■□□ 2.82
Ctla2a-201ENSMUST00000021880 Iqgap2Q3UQ44 1575 aa32.63■■■□□ 2.81
Ctla2a-201ENSMUST00000021880 Cc2d2aQ8CFW7 1633 aa32.53■■■□□ 2.8
Ctla2a-201ENSMUST00000021880 Rtl1Q7M732 1744 aa32.48■■■□□ 2.79
Ctla2a-201ENSMUST00000021880 Fam135aQ6NS59 1506 aa32.35■■■□□ 2.77
Ctla2a-201ENSMUST00000021880 Wdr62Q3U3T8 1523 aa32.34■■■□□ 2.77
Ctla2a-201ENSMUST00000021880 Frmpd1A2AKB4 1549 aa32.27■■■□□ 2.76
Ctla2a-201ENSMUST00000021880 Phldb1Q6PDH0 1371 aaKnown RBP32.15■■■□□ 2.74
Ctla2a-201ENSMUST00000021880 Baz1bQ9Z277 1479 aa32.13■■■□□ 2.73
Ctla2a-201ENSMUST00000021880 Cttnbp2B9EJA2 1648 aa32.01■■■□□ 2.71
Ctla2a-201ENSMUST00000021880 CftrP26361 1476 aa32■■■□□ 2.71
Ctla2a-201ENSMUST00000021880 Brd4Q9ESU6 1400 aaKnown RBP31.98■■■□□ 2.71
Ctla2a-201ENSMUST00000021880 Synj1Q8CHC4 1574 aa31.91■■■□□ 2.7
Ctla2a-201ENSMUST00000021880 Unc13aQ4KUS2 1712 aa31.86■■■□□ 2.69
Ctla2a-201ENSMUST00000021880 Ubl4bQ9CQ84 188 aa31.81■■■□□ 2.68
Ctla2a-201ENSMUST00000021880 Ccdc136Q3TVA9 1136 aa31.8■■■□□ 2.68
Ctla2a-201ENSMUST00000021880 Mrc2Q64449 1479 aa31.6■■■□□ 2.65
Ctla2a-201ENSMUST00000021880 Trim41Q5NCC3 630 aa31.44■■■□□ 2.62
Ctla2a-201ENSMUST00000021880 Esf1Q3V1V3 845 aaKnown RBP31.43■■■□□ 2.62
Ctla2a-201ENSMUST00000021880 Rsf1E9PWW9 1441 aaKnown RBP31.26■■■□□ 2.6
Ctla2a-201ENSMUST00000021880 Kif15Q6P9L6 1387 aa31.15■■■□□ 2.58
Ctla2a-201ENSMUST00000021880 Cux2P70298 1426 aa31.11■■■□□ 2.57
Ctla2a-201ENSMUST00000021880 Lamc3Q9R0B6 1581 aa31.08■■■□□ 2.57
Ctla2a-201ENSMUST00000021880 Lrriq1Q0P5X1 1673 aa30.89■■■□□ 2.54
Ctla2a-201ENSMUST00000021880 Kif21aQ9QXL2 1672 aa30.87■■■□□ 2.53
Ctla2a-201ENSMUST00000021880 Npm1Q61937 292 aaKnown RBP30.83■■■□□ 2.53
Ctla2a-201ENSMUST00000021880 Golga3P55937 1487 aa30.83■■■□□ 2.53
Ctla2a-201ENSMUST00000021880 Top2bQ64511 1612 aa30.8■■■□□ 2.52
Ctla2a-201ENSMUST00000021880 Phf23Q8BSN5 401 aa30.78■■■□□ 2.52
Ctla2a-201ENSMUST00000021880 Cep164Q5DU05 1446 aa30.76■■■□□ 2.51
Ctla2a-201ENSMUST00000021880 TnnQ80Z71 1560 aa30.74■■■□□ 2.51
Ctla2a-201ENSMUST00000021880 Ccdc18Q640L5 1455 aa30.66■■■□□ 2.5
Ctla2a-201ENSMUST00000021880 Cngb1E1AZ71 1325 aa30.65■■■□□ 2.5
Ctla2a-201ENSMUST00000021880 Fmn1Q05860 1466 aa30.51■■■□□ 2.47
Ctla2a-201ENSMUST00000021880 Camsap1A2AHC3 1581 aa30.51■■■□□ 2.47
Ctla2a-201ENSMUST00000021880 Eif4g3Q80XI3 1579 aaKnown RBP30.48■■■□□ 2.47
Ctla2a-201ENSMUST00000021880 Dhx29Q6PGC1 1365 aaKnown RBP30.47■■■□□ 2.47
Ctla2a-201ENSMUST00000021880 Il27Q8K3I6 234 aa30.46■■■□□ 2.47
Ctla2a-201ENSMUST00000021880 LrpprcQ6PB66 1392 aaKnown RBP30.45■■■□□ 2.46
Ctla2a-201ENSMUST00000021880 Urb2E9Q7L1 1524 aaKnown RBP30.38■■■□□ 2.45
Ctla2a-201ENSMUST00000021880 Crocc2F6XLV1 1638 aa30.36■■■□□ 2.45
Ctla2a-201ENSMUST00000021880 Plb1Q3TTY0 1478 aa30.34■■■□□ 2.45
Ctla2a-201ENSMUST00000021880 PogzQ8BZH4 1409 aaKnown RBP30.27■■■□□ 2.44
Ctla2a-201ENSMUST00000021880 Ift140E9PY46 1464 aa30.15■■■□□ 2.42
Ctla2a-201ENSMUST00000021880 Duox2A2AQ99 1517 aa30.12■■■□□ 2.41
Ctla2a-201ENSMUST00000021880 Grin2bQ01097 1482 aa30.1■■■□□ 2.41
Ctla2a-201ENSMUST00000021880 Shroom2A2ALU4 1481 aa30.08■■■□□ 2.41
Ctla2a-201ENSMUST00000021880 Dnajc5P60904 198 aa30.08■■■□□ 2.41
Ctla2a-201ENSMUST00000021880 Rusc2Q80U22 1514 aa30■■■□□ 2.39
Ctla2a-201ENSMUST00000021880 Efcab5A0JP43 1406 aa29.95■■■□□ 2.39
Ctla2a-201ENSMUST00000021880 Ccdc88bQ4QRL3 1481 aa29.94■■■□□ 2.38
Ctla2a-201ENSMUST00000021880 Top2aQ01320 1528 aaKnown RBP29.9■■■□□ 2.38
Ctla2a-201ENSMUST00000021880 Disp1Q3TDN0 1521 aa29.89■■■□□ 2.37
Ctla2a-201ENSMUST00000021880 Pbrm1Q8BSQ9 1634 aaKnown RBP29.87■■■□□ 2.37
Ctla2a-201ENSMUST00000021880 Samd9lQ69Z37 1561 aa29.85■■■□□ 2.37
Ctla2a-201ENSMUST00000021880 NrkQ9R0G8 1455 aa29.82■■■□□ 2.36
Ctla2a-201ENSMUST00000021880 Cc2d2bA0A286YDU8 1405 aa29.78■■■□□ 2.36
Ctla2a-201ENSMUST00000021880 Nup160Q9Z0W3 1402 aaKnown RBP29.78■■■□□ 2.36
Ctla2a-201ENSMUST00000021880 Pabpn1Q8CCS6 302 aaKnown RBP29.77■■■□□ 2.36
Ctla2a-201ENSMUST00000021880 Setd1bQ8CFT2 1985 aa29.76■■■□□ 2.36
Ctla2a-201ENSMUST00000021880 Shroom4Q1W617 1475 aa29.66■■■□□ 2.34
Ctla2a-201ENSMUST00000021880 Rad54l2Q99NG0 1466 aa29.62■■■□□ 2.33
Ctla2a-201ENSMUST00000021880 Grin2aP35436 1464 aa29.61■■■□□ 2.33
Ctla2a-201ENSMUST00000021880 Col17a1Q07563 1470 aa29.59■■■□□ 2.33
Ctla2a-201ENSMUST00000021880 Magi3Q9EQJ9 1476 aa29.58■■■□□ 2.33
Ctla2a-201ENSMUST00000021880 PtprkP35822 1457 aa29.54■■■□□ 2.32
Ctla2a-201ENSMUST00000021880 AqrQ8CFQ3 1481 aaKnown RBP29.54■■■□□ 2.32
Ctla2a-201ENSMUST00000021880 Pelp1Q9DBD5 1123 aaKnown RBP29.54■■■□□ 2.32
Ctla2a-201ENSMUST00000021880 Gpatch8A2A6A1 1505 aa29.5■■■□□ 2.31
Ctla2a-201ENSMUST00000021880 SynmQ70IV5 1561 aa29.49■■■□□ 2.31
Ctla2a-201ENSMUST00000021880 Zcchc11B2RX14 1644 aaKnown RBP29.43■■■□□ 2.3
Ctla2a-201ENSMUST00000021880 Fgd6Q69ZL1 1399 aa29.42■■■□□ 2.3
Ctla2a-201ENSMUST00000021880 Pla2r1Q62028 1487 aa29.42■■■□□ 2.3
Ctla2a-201ENSMUST00000021880 Zeb1Q64318 1117 aa29.36■■■□□ 2.29
Ctla2a-201ENSMUST00000021880 Npm2Q80W85 207 aa29.26■■■□□ 2.28
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms