RNA–Protein interactions for RNA: ENSMUST00000020378.4

Best3-201, Transcript of Bestrophin-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Best3, Length 2,719 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Best3-201ENSMUST00000020378 Gm35339A0A140LHH9 1649 aa19.57■□□□□ 0.72
Best3-201ENSMUST00000020378 NischQ80TM9 1593 aa19.13■□□□□ 0.65
Best3-201ENSMUST00000020378 Abcc8B2RUS7 1588 aa18.61■□□□□ 0.57
Best3-201ENSMUST00000020378 Abcc9P70170 1546 aa18.49■□□□□ 0.55
Best3-201ENSMUST00000020378 ScribQ80U72 1612 aa18.13■□□□□ 0.49
Best3-201ENSMUST00000020378 NacadQ5SWP3 1504 aa17.52■□□□□ 0.39
Best3-201ENSMUST00000020378 Kdm5dQ62240 1548 aa17.45■□□□□ 0.38
Best3-201ENSMUST00000020378 Sycp2Q9CUU3 1500 aa17.2■□□□□ 0.34
Best3-201ENSMUST00000020378 Dcaf1Q80TR8 1506 aa17.08■□□□□ 0.32
Best3-201ENSMUST00000020378 BicraF8VPZ9 1578 aa17.01■□□□□ 0.31
Best3-201ENSMUST00000020378 Dnajc5bQ9CQ94 199 aa16.98■□□□□ 0.31
Best3-201ENSMUST00000020378 Rb1cc1Q9ESK9 1588 aa16.63■□□□□ 0.25
Best3-201ENSMUST00000020378 Pds5bQ4VA53 1446 aaKnown RBP16.6■□□□□ 0.25
Best3-201ENSMUST00000020378 Thoc2B1AZI6 1594 aaKnown RBP16.6■□□□□ 0.25
Best3-201ENSMUST00000020378 Crybg2B7ZCC2 1516 aa16.42■□□□□ 0.22
Best3-201ENSMUST00000020378 Baz1aO88379 1555 aa16.39■□□□□ 0.21
Best3-201ENSMUST00000020378 Atad2bE9Q166 1460 aaKnown RBP16.38■□□□□ 0.21
Best3-201ENSMUST00000020378 Ccdc180J3QNE4 1664 aa16.38■□□□□ 0.21
Best3-201ENSMUST00000020378 Cc2d2aQ8CFW7 1633 aa16.29■□□□□ 0.2
Best3-201ENSMUST00000020378 Rhox8Q6VSS7 320 aa16.24■□□□□ 0.19
Best3-201ENSMUST00000020378 Ercc6F8VPZ5 1481 aa16.21■□□□□ 0.19
Best3-201ENSMUST00000020378 Rpgrip1Q9EPQ2 1331 aa16.18■□□□□ 0.18
Best3-201ENSMUST00000020378 Zcchc6Q5BLK4 1491 aaKnown RBP16.16■□□□□ 0.18
Best3-201ENSMUST00000020378 Rtl1Q7M732 1744 aa16.16■□□□□ 0.18
Best3-201ENSMUST00000020378 Fam135aQ6NS59 1506 aa16.16■□□□□ 0.18
Best3-201ENSMUST00000020378 Smarca2Q6DIC0 1577 aa16.15■□□□□ 0.18
Best3-201ENSMUST00000020378 Smarca4Q3TKT4 1613 aaKnown RBP16.11■□□□□ 0.17
Best3-201ENSMUST00000020378 Iqgap2Q3UQ44 1575 aa16.06■□□□□ 0.16
Best3-201ENSMUST00000020378 Baz1bQ9Z277 1479 aa16■□□□□ 0.15
Best3-201ENSMUST00000020378 Wdr62Q3U3T8 1523 aa15.99■□□□□ 0.15
Best3-201ENSMUST00000020378 Frmpd1A2AKB4 1549 aa15.96■□□□□ 0.15
Best3-201ENSMUST00000020378 Cecr2E9Q2Z1 1453 aa15.96■□□□□ 0.14
Best3-201ENSMUST00000020378 Phldb1Q6PDH0 1371 aaKnown RBP15.95■□□□□ 0.14
Best3-201ENSMUST00000020378 Ubl4bQ9CQ84 188 aa15.77■□□□□ 0.12
Best3-201ENSMUST00000020378 Mrc2Q64449 1479 aa15.75■□□□□ 0.11
Best3-201ENSMUST00000020378 Unc13aQ4KUS2 1712 aa15.73■□□□□ 0.11
Best3-201ENSMUST00000020378 Dnajc5P60904 198 aa15.71■□□□□ 0.11
Best3-201ENSMUST00000020378 Acin1Q9JIX8 1338 aaKnown RBP15.7■□□□□ 0.1
Best3-201ENSMUST00000020378 CftrP26361 1476 aa15.54■□□□□ 0.08
Best3-201ENSMUST00000020378 Cttnbp2B9EJA2 1648 aa15.53■□□□□ 0.08
Best3-201ENSMUST00000020378 Trim41Q5NCC3 630 aa15.49■□□□□ 0.07
Best3-201ENSMUST00000020378 Synj1Q8CHC4 1574 aa15.47■□□□□ 0.07
Best3-201ENSMUST00000020378 Lrriq1Q0P5X1 1673 aa15.43■□□□□ 0.06
Best3-201ENSMUST00000020378 Pcgf6Q99NA9 353 aa15.4■□□□□ 0.06
Best3-201ENSMUST00000020378 Brd4Q9ESU6 1400 aaKnown RBP15.39■□□□□ 0.05
Best3-201ENSMUST00000020378 Rsf1E9PWW9 1441 aaKnown RBP15.37■□□□□ 0.05
Best3-201ENSMUST00000020378 Ehmt2Q9Z148 1263 aaKnown RBP15.34■□□□□ 0.05
Best3-201ENSMUST00000020378 Cux2P70298 1426 aa15.32■□□□□ 0.04
Best3-201ENSMUST00000020378 Kif21aQ9QXL2 1672 aa15.29■□□□□ 0.04
Best3-201ENSMUST00000020378 Kif15Q6P9L6 1387 aa15.25■□□□□ 0.03
Best3-201ENSMUST00000020378 Shroom2A2ALU4 1481 aa15.24■□□□□ 0.03
Best3-201ENSMUST00000020378 Eif4g3Q80XI3 1579 aaKnown RBP15.22■□□□□ 0.03
Best3-201ENSMUST00000020378 Lamc3Q9R0B6 1581 aa15.18■□□□□ 0.02
Best3-201ENSMUST00000020378 Esf1Q3V1V3 845 aaKnown RBP15.16■□□□□ 0.02
Best3-201ENSMUST00000020378 Ccdc136Q3TVA9 1136 aa15.15■□□□□ 0.02
Best3-201ENSMUST00000020378 Npm1Q61937 292 aaKnown RBP15.11■□□□□ 0.01
Best3-201ENSMUST00000020378 HrcG5E8J6 738 aa15.1■□□□□ 0.01
Best3-201ENSMUST00000020378 Col17a1Q07563 1470 aa15.08■□□□□ 0
Best3-201ENSMUST00000020378 Cep164Q5DU05 1446 aa15.07■□□□□ 0
Best3-201ENSMUST00000020378 Urb2E9Q7L1 1524 aaKnown RBP15.05■□□□□ -0
Best3-201ENSMUST00000020378 Plb1Q3TTY0 1478 aa15□□□□□ -0.01
Best3-201ENSMUST00000020378 Supt5hO55201 1082 aaKnown RBP14.98□□□□□ -0.01
Best3-201ENSMUST00000020378 Dhx29Q6PGC1 1365 aaKnown RBP14.98□□□□□ -0.01
Best3-201ENSMUST00000020378 Pabpn1Q8CCS6 302 aaKnown RBP14.97□□□□□ -0.01
Best3-201ENSMUST00000020378 Top2bQ64511 1612 aa14.97□□□□□ -0.01
Best3-201ENSMUST00000020378 Ccdc18Q640L5 1455 aa14.92□□□□□ -0.02
Best3-201ENSMUST00000020378 TnnQ80Z71 1560 aa14.92□□□□□ -0.02
Best3-201ENSMUST00000020378 Crocc2F6XLV1 1638 aa14.91□□□□□ -0.02
Best3-201ENSMUST00000020378 LrpprcQ6PB66 1392 aaKnown RBP14.9□□□□□ -0.02
Best3-201ENSMUST00000020378 Rusc2Q80U22 1514 aa14.88□□□□□ -0.03
Best3-201ENSMUST00000020378 Neurod1Q60867 357 aa14.86□□□□□ -0.03
Best3-201ENSMUST00000020378 Ift140E9PY46 1464 aa14.86□□□□□ -0.03
Best3-201ENSMUST00000020378 Zcchc11B2RX14 1644 aaKnown RBP14.85□□□□□ -0.03
Best3-201ENSMUST00000020378 Camsap1A2AHC3 1581 aa14.85□□□□□ -0.03
Best3-201ENSMUST00000020378 Il27Q8K3I6 234 aa14.84□□□□□ -0.03
Best3-201ENSMUST00000020378 PogzQ8BZH4 1409 aaKnown RBP14.8□□□□□ -0.04
Best3-201ENSMUST00000020378 Pelp1Q9DBD5 1123 aaKnown RBP14.79□□□□□ -0.04
Best3-201ENSMUST00000020378 Golga3P55937 1487 aa14.73□□□□□ -0.05
Best3-201ENSMUST00000020378 Duox2A2AQ99 1517 aa14.71□□□□□ -0.05
Best3-201ENSMUST00000020378 Disp1Q3TDN0 1521 aa14.71□□□□□ -0.05
Best3-201ENSMUST00000020378 Las1lA2BE28 776 aaKnown RBP14.7□□□□□ -0.06
Best3-201ENSMUST00000020378 Nup160Q9Z0W3 1402 aaKnown RBP14.66□□□□□ -0.06
Best3-201ENSMUST00000020378 Pbrm1Q8BSQ9 1634 aaKnown RBP14.65□□□□□ -0.06
Best3-201ENSMUST00000020378 Cc2d2bA0A286YDU8 1405 aa14.65□□□□□ -0.06
Best3-201ENSMUST00000020378 Fmn1Q05860 1466 aa14.65□□□□□ -0.07
Best3-201ENSMUST00000020378 Adgrl3Q80TS3 1537 aa14.62□□□□□ -0.07
Best3-201ENSMUST00000020378 Grin2bQ01097 1482 aa14.62□□□□□ -0.07
Best3-201ENSMUST00000020378 Setd1bQ8CFT2 1985 aa14.62□□□□□ -0.07
Best3-201ENSMUST00000020378 Arhgef5E9Q7D5 1581 aa14.61□□□□□ -0.07
Best3-201ENSMUST00000020378 Cngb1E1AZ71 1325 aa14.61□□□□□ -0.07
Best3-201ENSMUST00000020378 Pcdh10E9PXQ7 1057 aa14.6□□□□□ -0.07
Best3-201ENSMUST00000020378 Samd9lQ69Z37 1561 aa14.59□□□□□ -0.07
Best3-201ENSMUST00000020378 PtprkP35822 1457 aa14.56□□□□□ -0.08
Best3-201ENSMUST00000020378 Cep170Q6A065 1588 aa14.55□□□□□ -0.08
Best3-201ENSMUST00000020378 Efcab5A0JP43 1406 aa14.55□□□□□ -0.08
Best3-201ENSMUST00000020378 Zeb1Q64318 1117 aa14.53□□□□□ -0.08
Best3-201ENSMUST00000020378 Fgd6Q69ZL1 1399 aa14.53□□□□□ -0.08
Best3-201ENSMUST00000020378 AqrQ8CFQ3 1481 aaKnown RBP14.53□□□□□ -0.08
Best3-201ENSMUST00000020378 Gapvd1Q6PAR5 1458 aa14.52□□□□□ -0.08
Best3-201ENSMUST00000020378 Gm156Q58A37 223 aa14.51□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms