RNA–Protein interactions for RNA: ENSMUST00000012540.4

Nanog-201, Transcript of Homeobox protein NANOG, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Nanog, Length 2,211 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nanog-201ENSMUST00000012540 NischQ80TM9 1593 aa22.97■■□□□ 1.27
Nanog-201ENSMUST00000012540 Gm35339A0A140LHH9 1649 aa22.81■■□□□ 1.24
Nanog-201ENSMUST00000012540 Abcc9P70170 1546 aa22.25■■□□□ 1.15
Nanog-201ENSMUST00000012540 Abcc8B2RUS7 1588 aa21.99■■□□□ 1.11
Nanog-201ENSMUST00000012540 ScribQ80U72 1612 aa20.84■□□□□ 0.93
Nanog-201ENSMUST00000012540 Rhox8Q6VSS7 320 aa20.72■□□□□ 0.91
Nanog-201ENSMUST00000012540 Kdm5dQ62240 1548 aa20.31■□□□□ 0.84
Nanog-201ENSMUST00000012540 Dcaf1Q80TR8 1506 aa20.3■□□□□ 0.84
Nanog-201ENSMUST00000012540 NacadQ5SWP3 1504 aa20.19■□□□□ 0.82
Nanog-201ENSMUST00000012540 Rb1cc1Q9ESK9 1588 aa20.08■□□□□ 0.8
Nanog-201ENSMUST00000012540 Chic1Q8CBW7 227 aa20.06■□□□□ 0.8
Nanog-201ENSMUST00000012540 Baz1aO88379 1555 aa19.8■□□□□ 0.76
Nanog-201ENSMUST00000012540 Sycp2Q9CUU3 1500 aa19.79■□□□□ 0.76
Nanog-201ENSMUST00000012540 Ccdc180J3QNE4 1664 aa19.69■□□□□ 0.74
Nanog-201ENSMUST00000012540 Rtl1Q7M732 1744 aa19.61■□□□□ 0.73
Nanog-201ENSMUST00000012540 Zcchc6Q5BLK4 1491 aaKnown RBP19.53■□□□□ 0.72
Nanog-201ENSMUST00000012540 Crybg2B7ZCC2 1516 aa19.5■□□□□ 0.71
Nanog-201ENSMUST00000012540 BicraF8VPZ9 1578 aa19.46■□□□□ 0.71
Nanog-201ENSMUST00000012540 Mapk8ip2Q9ERE9 830 aa19.4■□□□□ 0.7
Nanog-201ENSMUST00000012540 Ccdc136Q3TVA9 1136 aa19.32■□□□□ 0.68
Nanog-201ENSMUST00000012540 Smarca2Q6DIC0 1577 aa19.3■□□□□ 0.68
Nanog-201ENSMUST00000012540 Cecr2E9Q2Z1 1453 aa19.09■□□□□ 0.65
Nanog-201ENSMUST00000012540 Trim41Q5NCC3 630 aa18.85■□□□□ 0.61
Nanog-201ENSMUST00000012540 Brd4Q9ESU6 1400 aaKnown RBP18.8■□□□□ 0.6
Nanog-201ENSMUST00000012540 Smarca4Q3TKT4 1613 aaKnown RBP18.79■□□□□ 0.6
Nanog-201ENSMUST00000012540 Synj1Q8CHC4 1574 aa18.76■□□□□ 0.59
Nanog-201ENSMUST00000012540 CftrP26361 1476 aa18.7■□□□□ 0.58
Nanog-201ENSMUST00000012540 Pds5bQ4VA53 1446 aaKnown RBP18.69■□□□□ 0.58
Nanog-201ENSMUST00000012540 Atad2bE9Q166 1460 aaKnown RBP18.67■□□□□ 0.58
Nanog-201ENSMUST00000012540 Iqgap2Q3UQ44 1575 aa18.62■□□□□ 0.57
Nanog-201ENSMUST00000012540 Cttnbp2B9EJA2 1648 aa18.59■□□□□ 0.57
Nanog-201ENSMUST00000012540 Esf1Q3V1V3 845 aaKnown RBP18.54■□□□□ 0.56
Nanog-201ENSMUST00000012540 Cngb1E1AZ71 1325 aa18.51■□□□□ 0.55
Nanog-201ENSMUST00000012540 Golga3P55937 1487 aa18.42■□□□□ 0.54
Nanog-201ENSMUST00000012540 HrcG5E8J6 738 aa18.4■□□□□ 0.54
Nanog-201ENSMUST00000012540 Frmpd1A2AKB4 1549 aa18.36■□□□□ 0.53
Nanog-201ENSMUST00000012540 Wdr62Q3U3T8 1523 aa18.34■□□□□ 0.53
Nanog-201ENSMUST00000012540 Ercc6F8VPZ5 1481 aa18.34■□□□□ 0.53
Nanog-201ENSMUST00000012540 Thoc2B1AZI6 1594 aaKnown RBP18.29■□□□□ 0.52
Nanog-201ENSMUST00000012540 Top2bQ64511 1612 aa18.27■□□□□ 0.51
Nanog-201ENSMUST00000012540 Rsf1E9PWW9 1441 aaKnown RBP18.24■□□□□ 0.51
Nanog-201ENSMUST00000012540 Ccdc88bQ4QRL3 1481 aa18.22■□□□□ 0.51
Nanog-201ENSMUST00000012540 Phf23Q8BSN5 401 aa18.17■□□□□ 0.5
Nanog-201ENSMUST00000012540 Cc2d2aQ8CFW7 1633 aa18.16■□□□□ 0.5
Nanog-201ENSMUST00000012540 Dnajc5bQ9CQ94 199 aa18.14■□□□□ 0.49
Nanog-201ENSMUST00000012540 Cep164Q5DU05 1446 aa18.11■□□□□ 0.49
Nanog-201ENSMUST00000012540 Unc13aQ4KUS2 1712 aa18.11■□□□□ 0.49
Nanog-201ENSMUST00000012540 Phldb1Q6PDH0 1371 aaKnown RBP18.06■□□□□ 0.48
Nanog-201ENSMUST00000012540 Fmn1Q05860 1466 aa18.04■□□□□ 0.48
Nanog-201ENSMUST00000012540 Fam135aQ6NS59 1506 aa17.99■□□□□ 0.47
Nanog-201ENSMUST00000012540 Kif15Q6P9L6 1387 aa17.98■□□□□ 0.47
Nanog-201ENSMUST00000012540 Gab3Q8BSM5 595 aa17.98■□□□□ 0.47
Nanog-201ENSMUST00000012540 Ubl4bQ9CQ84 188 aa17.97■□□□□ 0.47
Nanog-201ENSMUST00000012540 Lamc3Q9R0B6 1581 aa17.93■□□□□ 0.46
Nanog-201ENSMUST00000012540 TnnQ80Z71 1560 aa17.92■□□□□ 0.46
Nanog-201ENSMUST00000012540 Top2aQ01320 1528 aaKnown RBP17.86■□□□□ 0.45
Nanog-201ENSMUST00000012540 Il27Q8K3I6 234 aa17.85■□□□□ 0.45
Nanog-201ENSMUST00000012540 Cux2P70298 1426 aa17.8■□□□□ 0.44
Nanog-201ENSMUST00000012540 Camsap1A2AHC3 1581 aa17.73■□□□□ 0.43
Nanog-201ENSMUST00000012540 Ccdc18Q640L5 1455 aa17.7■□□□□ 0.42
Nanog-201ENSMUST00000012540 Npm1Q61937 292 aaKnown RBP17.67■□□□□ 0.42
Nanog-201ENSMUST00000012540 Plppr3Q7TPB0 716 aa17.64■□□□□ 0.42
Nanog-201ENSMUST00000012540 Mrc2Q64449 1479 aa17.63■□□□□ 0.41
Nanog-201ENSMUST00000012540 Rapgef2Q8CHG7 1496 aa17.61■□□□□ 0.41
Nanog-201ENSMUST00000012540 PtprkP35822 1457 aa17.6■□□□□ 0.41
Nanog-201ENSMUST00000012540 Npm2Q80W85 207 aa17.6■□□□□ 0.41
Nanog-201ENSMUST00000012540 Ehmt2Q9Z148 1263 aaKnown RBP17.6■□□□□ 0.41
Nanog-201ENSMUST00000012540 Baz1bQ9Z277 1479 aa17.58■□□□□ 0.4
Nanog-201ENSMUST00000012540 Grin2bQ01097 1482 aa17.57■□□□□ 0.4
Nanog-201ENSMUST00000012540 LrpprcQ6PB66 1392 aaKnown RBP17.54■□□□□ 0.4
Nanog-201ENSMUST00000012540 Cep162Q6ZQ06 1403 aa17.51■□□□□ 0.39
Nanog-201ENSMUST00000012540 NrkQ9R0G8 1455 aa17.5■□□□□ 0.39
Nanog-201ENSMUST00000012540 Myt1lP97500 1187 aa17.49■□□□□ 0.39
Nanog-201ENSMUST00000012540 Shroom4Q1W617 1475 aa17.49■□□□□ 0.39
Nanog-201ENSMUST00000012540 Kif21aQ9QXL2 1672 aa17.48■□□□□ 0.39
Nanog-201ENSMUST00000012540 Dhx29Q6PGC1 1365 aaKnown RBP17.47■□□□□ 0.39
Nanog-201ENSMUST00000012540 PogzQ8BZH4 1409 aaKnown RBP17.47■□□□□ 0.39
Nanog-201ENSMUST00000012540 Duox2A2AQ99 1517 aa17.44■□□□□ 0.38
Nanog-201ENSMUST00000012540 Eif4g1Q6NZJ6 1600 aaKnown RBP17.4■□□□□ 0.38
Nanog-201ENSMUST00000012540 Arhgap35Q91YM2 1499 aa17.4■□□□□ 0.38
Nanog-201ENSMUST00000012540 Zeb1Q64318 1117 aa17.39■□□□□ 0.37
Nanog-201ENSMUST00000012540 Efcab5A0JP43 1406 aa17.38■□□□□ 0.37
Nanog-201ENSMUST00000012540 Crocc2F6XLV1 1638 aa17.34■□□□□ 0.37
Nanog-201ENSMUST00000012540 Samd9lQ69Z37 1561 aa17.33■□□□□ 0.36
Nanog-201ENSMUST00000012540 Mroh2bQ7M6Y6 1581 aa17.3■□□□□ 0.36
Nanog-201ENSMUST00000012540 Plb1Q3TTY0 1478 aa17.29■□□□□ 0.36
Nanog-201ENSMUST00000012540 Rad54l2Q99NG0 1466 aa17.26■□□□□ 0.35
Nanog-201ENSMUST00000012540 Urb2E9Q7L1 1524 aaKnown RBP17.25■□□□□ 0.35
Nanog-201ENSMUST00000012540 Map3k1P53349 1493 aa17.24■□□□□ 0.35
Nanog-201ENSMUST00000012540 Lrriq1Q0P5X1 1673 aa17.22■□□□□ 0.35
Nanog-201ENSMUST00000012540 Clip1Q922J3 1391 aa17.21■□□□□ 0.34
Nanog-201ENSMUST00000012540 SynmQ70IV5 1561 aa17.18■□□□□ 0.34
Nanog-201ENSMUST00000012540 Disp1Q3TDN0 1521 aa17.13■□□□□ 0.33
Nanog-201ENSMUST00000012540 Carmil1Q6EDY6 1374 aa17.13■□□□□ 0.33
Nanog-201ENSMUST00000012540 AqrQ8CFQ3 1481 aaKnown RBP17.12■□□□□ 0.33
Nanog-201ENSMUST00000012540 Magi3Q9EQJ9 1476 aa17.11■□□□□ 0.33
Nanog-201ENSMUST00000012540 Ap3b1Q9Z1T1 1105 aa17.11■□□□□ 0.33
Nanog-201ENSMUST00000012540 Pla2r1Q62028 1487 aa17.09■□□□□ 0.33
Nanog-201ENSMUST00000012540 Grin2aP35436 1464 aa17.09■□□□□ 0.33
Nanog-201ENSMUST00000012540 Setd5Q5XJV7 1441 aa17.08■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms