RNA–Protein interactions for RNA: ENSMUST00000007266.13

Lsm2-201, Transcript of U6 snRNA-associated Sm-like protein LSm2, mousemouse

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Gene Lsm2, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2-201ENSMUST00000007266 Gm35339A0A140LHH9 1649 aa43.98■■■■■ 4.63
Lsm2-201ENSMUST00000007266 NischQ80TM9 1593 aa43.29■■■■■ 4.52
Lsm2-201ENSMUST00000007266 Abcc8B2RUS7 1588 aa41.98■■■■■ 4.31
Lsm2-201ENSMUST00000007266 Abcc9P70170 1546 aa41.86■■■■■ 4.29
Lsm2-201ENSMUST00000007266 ScribQ80U72 1612 aa40.65■■■■■ 4.1
Lsm2-201ENSMUST00000007266 NacadQ5SWP3 1504 aa39.34■■■■□ 3.89
Lsm2-201ENSMUST00000007266 Kdm5dQ62240 1548 aa39.24■■■■□ 3.87
Lsm2-201ENSMUST00000007266 Sycp2Q9CUU3 1500 aa38.59■■■■□ 3.77
Lsm2-201ENSMUST00000007266 Dcaf1Q80TR8 1506 aa38.52■■■■□ 3.76
Lsm2-201ENSMUST00000007266 BicraF8VPZ9 1578 aa38.11■■■■□ 3.69
Lsm2-201ENSMUST00000007266 Rb1cc1Q9ESK9 1588 aa37.69■■■■□ 3.62
Lsm2-201ENSMUST00000007266 Dnajc5bQ9CQ94 199 aa37.6■■■■□ 3.61
Lsm2-201ENSMUST00000007266 Baz1aO88379 1555 aa37.14■■■■□ 3.54
Lsm2-201ENSMUST00000007266 Pds5bQ4VA53 1446 aaKnown RBP37.11■■■■□ 3.53
Lsm2-201ENSMUST00000007266 Crybg2B7ZCC2 1516 aa37.09■■■■□ 3.53
Lsm2-201ENSMUST00000007266 Rhox8Q6VSS7 320 aa37.08■■■■□ 3.53
Lsm2-201ENSMUST00000007266 Ccdc180J3QNE4 1664 aa37.02■■■■□ 3.52
Lsm2-201ENSMUST00000007266 Thoc2B1AZI6 1594 aaKnown RBP36.91■■■■□ 3.5
Lsm2-201ENSMUST00000007266 Atad2bE9Q166 1460 aaKnown RBP36.69■■■■□ 3.46
Lsm2-201ENSMUST00000007266 Zcchc6Q5BLK4 1491 aaKnown RBP36.67■■■■□ 3.46
Lsm2-201ENSMUST00000007266 Cc2d2aQ8CFW7 1633 aa36.29■■■■□ 3.4
Lsm2-201ENSMUST00000007266 Ercc6F8VPZ5 1481 aa36.28■■■■□ 3.4
Lsm2-201ENSMUST00000007266 Smarca2Q6DIC0 1577 aa36.24■■■■□ 3.39
Lsm2-201ENSMUST00000007266 Smarca4Q3TKT4 1613 aaKnown RBP36.24■■■■□ 3.39
Lsm2-201ENSMUST00000007266 Cecr2E9Q2Z1 1453 aa36.1■■■■□ 3.37
Lsm2-201ENSMUST00000007266 Iqgap2Q3UQ44 1575 aa36.1■■■■□ 3.37
Lsm2-201ENSMUST00000007266 Fam135aQ6NS59 1506 aa36■■■■□ 3.35
Lsm2-201ENSMUST00000007266 Wdr62Q3U3T8 1523 aa35.85■■■■□ 3.33
Lsm2-201ENSMUST00000007266 Frmpd1A2AKB4 1549 aa35.83■■■■□ 3.33
Lsm2-201ENSMUST00000007266 Phldb1Q6PDH0 1371 aaKnown RBP35.71■■■■□ 3.31
Lsm2-201ENSMUST00000007266 Baz1bQ9Z277 1479 aa35.58■■■■□ 3.29
Lsm2-201ENSMUST00000007266 Ubl4bQ9CQ84 188 aa35.4■■■■□ 3.26
Lsm2-201ENSMUST00000007266 Unc13aQ4KUS2 1712 aa35.24■■■■□ 3.23
Lsm2-201ENSMUST00000007266 CftrP26361 1476 aa35.21■■■■□ 3.23
Lsm2-201ENSMUST00000007266 Mrc2Q64449 1479 aa35.16■■■■□ 3.22
Lsm2-201ENSMUST00000007266 Cttnbp2B9EJA2 1648 aa35.11■■■■□ 3.21
Lsm2-201ENSMUST00000007266 Synj1Q8CHC4 1574 aa35.08■■■■□ 3.21
Lsm2-201ENSMUST00000007266 Rtl1Q7M732 1744 aa35.04■■■■□ 3.2
Lsm2-201ENSMUST00000007266 Brd4Q9ESU6 1400 aaKnown RBP35.01■■■■□ 3.2
Lsm2-201ENSMUST00000007266 Ccdc136Q3TVA9 1136 aa34.81■■■■□ 3.16
Lsm2-201ENSMUST00000007266 Esf1Q3V1V3 845 aaKnown RBP34.54■■■■□ 3.12
Lsm2-201ENSMUST00000007266 Cux2P70298 1426 aa34.49■■■■□ 3.11
Lsm2-201ENSMUST00000007266 Rsf1E9PWW9 1441 aaKnown RBP34.47■■■■□ 3.11
Lsm2-201ENSMUST00000007266 Kif15Q6P9L6 1387 aa34.44■■■■□ 3.1
Lsm2-201ENSMUST00000007266 Lrriq1Q0P5X1 1673 aa34.39■■■■□ 3.1
Lsm2-201ENSMUST00000007266 Trim41Q5NCC3 630 aa34.33■■■■□ 3.09
Lsm2-201ENSMUST00000007266 Dnajc5P60904 198 aa34.32■■■■□ 3.08
Lsm2-201ENSMUST00000007266 Kif21aQ9QXL2 1672 aa34.24■■■■□ 3.07
Lsm2-201ENSMUST00000007266 Lamc3Q9R0B6 1581 aa34.23■■■■□ 3.07
Lsm2-201ENSMUST00000007266 Npm1Q61937 292 aaKnown RBP34.1■■■■□ 3.05
Lsm2-201ENSMUST00000007266 Cep164Q5DU05 1446 aa33.95■■■■□ 3.02
Lsm2-201ENSMUST00000007266 Eif4g3Q80XI3 1579 aaKnown RBP33.9■■■■□ 3.02
Lsm2-201ENSMUST00000007266 Urb2E9Q7L1 1524 aaKnown RBP33.74■■■□□ 2.99
Lsm2-201ENSMUST00000007266 Dhx29Q6PGC1 1365 aaKnown RBP33.74■■■□□ 2.99
Lsm2-201ENSMUST00000007266 TnnQ80Z71 1560 aa33.74■■■□□ 2.99
Lsm2-201ENSMUST00000007266 Ccdc18Q640L5 1455 aa33.72■■■□□ 2.99
Lsm2-201ENSMUST00000007266 Shroom2A2ALU4 1481 aa33.71■■■□□ 2.99
Lsm2-201ENSMUST00000007266 Plb1Q3TTY0 1478 aa33.69■■■□□ 2.98
Lsm2-201ENSMUST00000007266 Il27Q8K3I6 234 aa33.68■■■□□ 2.98
Lsm2-201ENSMUST00000007266 Golga3P55937 1487 aa33.66■■■□□ 2.98
Lsm2-201ENSMUST00000007266 Top2bQ64511 1612 aa33.64■■■□□ 2.98
Lsm2-201ENSMUST00000007266 LrpprcQ6PB66 1392 aaKnown RBP33.64■■■□□ 2.98
Lsm2-201ENSMUST00000007266 Camsap1A2AHC3 1581 aa33.57■■■□□ 2.96
Lsm2-201ENSMUST00000007266 Crocc2F6XLV1 1638 aa33.53■■■□□ 2.96
Lsm2-201ENSMUST00000007266 Cngb1E1AZ71 1325 aa33.52■■■□□ 2.96
Lsm2-201ENSMUST00000007266 PogzQ8BZH4 1409 aaKnown RBP33.41■■■□□ 2.94
Lsm2-201ENSMUST00000007266 Ift140E9PY46 1464 aa33.36■■■□□ 2.93
Lsm2-201ENSMUST00000007266 Fmn1Q05860 1466 aa33.34■■■□□ 2.93
Lsm2-201ENSMUST00000007266 Pabpn1Q8CCS6 302 aaKnown RBP33.33■■■□□ 2.93
Lsm2-201ENSMUST00000007266 Col17a1Q07563 1470 aa33.31■■■□□ 2.92
Lsm2-201ENSMUST00000007266 Rusc2Q80U22 1514 aa33.29■■■□□ 2.92
Lsm2-201ENSMUST00000007266 Duox2A2AQ99 1517 aa33.24■■■□□ 2.91
Lsm2-201ENSMUST00000007266 Disp1Q3TDN0 1521 aa33.12■■■□□ 2.89
Lsm2-201ENSMUST00000007266 Grin2bQ01097 1482 aa33.11■■■□□ 2.89
Lsm2-201ENSMUST00000007266 Pelp1Q9DBD5 1123 aaKnown RBP33.06■■■□□ 2.88
Lsm2-201ENSMUST00000007266 Nup160Q9Z0W3 1402 aaKnown RBP32.96■■■□□ 2.87
Lsm2-201ENSMUST00000007266 Samd9lQ69Z37 1561 aa32.95■■■□□ 2.86
Lsm2-201ENSMUST00000007266 Efcab5A0JP43 1406 aa32.93■■■□□ 2.86
Lsm2-201ENSMUST00000007266 Cc2d2bA0A286YDU8 1405 aa32.92■■■□□ 2.86
Lsm2-201ENSMUST00000007266 Zcchc11B2RX14 1644 aaKnown RBP32.88■■■□□ 2.85
Lsm2-201ENSMUST00000007266 Pbrm1Q8BSQ9 1634 aaKnown RBP32.87■■■□□ 2.85
Lsm2-201ENSMUST00000007266 Setd1bQ8CFT2 1985 aa32.84■■■□□ 2.85
Lsm2-201ENSMUST00000007266 Rad54l2Q99NG0 1466 aa32.76■■■□□ 2.84
Lsm2-201ENSMUST00000007266 Ccdc88bQ4QRL3 1481 aa32.7■■■□□ 2.83
Lsm2-201ENSMUST00000007266 Grin2aP35436 1464 aa32.69■■■□□ 2.82
Lsm2-201ENSMUST00000007266 Magi3Q9EQJ9 1476 aa32.68■■■□□ 2.82
Lsm2-201ENSMUST00000007266 AqrQ8CFQ3 1481 aaKnown RBP32.67■■■□□ 2.82
Lsm2-201ENSMUST00000007266 NrkQ9R0G8 1455 aa32.67■■■□□ 2.82
Lsm2-201ENSMUST00000007266 Top2aQ01320 1528 aaKnown RBP32.63■■■□□ 2.81
Lsm2-201ENSMUST00000007266 Fgd6Q69ZL1 1399 aa32.62■■■□□ 2.81
Lsm2-201ENSMUST00000007266 Adgrl3Q80TS3 1537 aa32.52■■■□□ 2.8
Lsm2-201ENSMUST00000007266 PtprkP35822 1457 aa32.5■■■□□ 2.79
Lsm2-201ENSMUST00000007266 Shroom4Q1W617 1475 aa32.48■■■□□ 2.79
Lsm2-201ENSMUST00000007266 Gapvd1Q6PAR5 1458 aa32.46■■■□□ 2.79
Lsm2-201ENSMUST00000007266 Pla2r1Q62028 1487 aa32.45■■■□□ 2.79
Lsm2-201ENSMUST00000007266 Chic1Q8CBW7 227 aa32.44■■■□□ 2.78
Lsm2-201ENSMUST00000007266 Gpatch8A2A6A1 1505 aa32.44■■■□□ 2.78
Lsm2-201ENSMUST00000007266 Cep170Q6A065 1588 aa32.44■■■□□ 2.78
Lsm2-201ENSMUST00000007266 Gm156Q58A37 223 aa32.41■■■□□ 2.78
Lsm2-201ENSMUST00000007266 SynmQ70IV5 1561 aa32.4■■■□□ 2.78
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms