RNA–Protein interactions for RNA: ENSMUST00000006611.8

Srm-201, Transcript of Spermidine synthase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Srm, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Srm-201ENSMUST00000006611 Gm35339A0A140LHH9 1649 aa47.55■■■■■ 5.2
Srm-201ENSMUST00000006611 NischQ80TM9 1593 aa46.82■■■■■ 5.09
Srm-201ENSMUST00000006611 Abcc8B2RUS7 1588 aa45.36■■■■■ 4.85
Srm-201ENSMUST00000006611 Abcc9P70170 1546 aa45.3■■■■■ 4.84
Srm-201ENSMUST00000006611 ScribQ80U72 1612 aa43.94■■■■■ 4.62
Srm-201ENSMUST00000006611 NacadQ5SWP3 1504 aa42.39■■■■■ 4.38
Srm-201ENSMUST00000006611 Kdm5dQ62240 1548 aa42.37■■■■■ 4.37
Srm-201ENSMUST00000006611 Dcaf1Q80TR8 1506 aa41.62■■■■■ 4.25
Srm-201ENSMUST00000006611 Sycp2Q9CUU3 1500 aa41.62■■■■■ 4.25
Srm-201ENSMUST00000006611 BicraF8VPZ9 1578 aa41.16■■■■■ 4.18
Srm-201ENSMUST00000006611 Rb1cc1Q9ESK9 1588 aa40.78■■■■■ 4.12
Srm-201ENSMUST00000006611 Dnajc5bQ9CQ94 199 aa40.41■■■■■ 4.06
Srm-201ENSMUST00000006611 Rhox8Q6VSS7 320 aa40.17■■■■■ 4.02
Srm-201ENSMUST00000006611 Baz1aO88379 1555 aa40.17■■■■■ 4.02
Srm-201ENSMUST00000006611 Ccdc180J3QNE4 1664 aa40.06■■■■■ 4
Srm-201ENSMUST00000006611 Crybg2B7ZCC2 1516 aa40■■■■□ 3.99
Srm-201ENSMUST00000006611 Pds5bQ4VA53 1446 aaKnown RBP39.88■■■■□ 3.97
Srm-201ENSMUST00000006611 Thoc2B1AZI6 1594 aaKnown RBP39.73■■■■□ 3.95
Srm-201ENSMUST00000006611 Zcchc6Q5BLK4 1491 aaKnown RBP39.63■■■■□ 3.93
Srm-201ENSMUST00000006611 Atad2bE9Q166 1460 aaKnown RBP39.5■■■■□ 3.91
Srm-201ENSMUST00000006611 Smarca4Q3TKT4 1613 aaKnown RBP39.11■■■■□ 3.85
Srm-201ENSMUST00000006611 Smarca2Q6DIC0 1577 aa39.08■■■■□ 3.85
Srm-201ENSMUST00000006611 Cc2d2aQ8CFW7 1633 aa39.08■■■■□ 3.85
Srm-201ENSMUST00000006611 Cecr2E9Q2Z1 1453 aa39.06■■■■□ 3.84
Srm-201ENSMUST00000006611 Ercc6F8VPZ5 1481 aa39.01■■■■□ 3.84
Srm-201ENSMUST00000006611 Iqgap2Q3UQ44 1575 aa38.95■■■■□ 3.83
Srm-201ENSMUST00000006611 Fam135aQ6NS59 1506 aa38.75■■■■□ 3.79
Srm-201ENSMUST00000006611 Wdr62Q3U3T8 1523 aa38.66■■■■□ 3.78
Srm-201ENSMUST00000006611 Frmpd1A2AKB4 1549 aa38.63■■■■□ 3.78
Srm-201ENSMUST00000006611 Phldb1Q6PDH0 1371 aaKnown RBP38.38■■■■□ 3.73
Srm-201ENSMUST00000006611 Unc13aQ4KUS2 1712 aa38.15■■■■□ 3.7
Srm-201ENSMUST00000006611 Baz1bQ9Z277 1479 aa38.12■■■■□ 3.69
Srm-201ENSMUST00000006611 Rtl1Q7M732 1744 aa38.11■■■■□ 3.69
Srm-201ENSMUST00000006611 CftrP26361 1476 aa38.05■■■■□ 3.68
Srm-201ENSMUST00000006611 Ubl4bQ9CQ84 188 aa38.05■■■■□ 3.68
Srm-201ENSMUST00000006611 Synj1Q8CHC4 1574 aa37.99■■■■□ 3.67
Srm-201ENSMUST00000006611 Cttnbp2B9EJA2 1648 aa37.97■■■■□ 3.67
Srm-201ENSMUST00000006611 Mrc2Q64449 1479 aa37.81■■■■□ 3.64
Srm-201ENSMUST00000006611 Brd4Q9ESU6 1400 aaKnown RBP37.79■■■■□ 3.64
Srm-201ENSMUST00000006611 Ccdc136Q3TVA9 1136 aa37.71■■■■□ 3.63
Srm-201ENSMUST00000006611 Esf1Q3V1V3 845 aaKnown RBP37.25■■■■□ 3.55
Srm-201ENSMUST00000006611 Cux2P70298 1426 aa37.17■■■■□ 3.54
Srm-201ENSMUST00000006611 Rsf1E9PWW9 1441 aaKnown RBP37.13■■■■□ 3.54
Srm-201ENSMUST00000006611 Kif15Q6P9L6 1387 aa37.13■■■■□ 3.53
Srm-201ENSMUST00000006611 Lrriq1Q0P5X1 1673 aa37.06■■■■□ 3.52
Srm-201ENSMUST00000006611 Trim41Q5NCC3 630 aa36.99■■■■□ 3.51
Srm-201ENSMUST00000006611 Lamc3Q9R0B6 1581 aa36.98■■■■□ 3.51
Srm-201ENSMUST00000006611 Kif21aQ9QXL2 1672 aa36.97■■■■□ 3.51
Srm-201ENSMUST00000006611 Npm1Q61937 292 aaKnown RBP36.67■■■■□ 3.46
Srm-201ENSMUST00000006611 Dnajc5P60904 198 aa36.61■■■■□ 3.45
Srm-201ENSMUST00000006611 Cep164Q5DU05 1446 aa36.55■■■■□ 3.44
Srm-201ENSMUST00000006611 TnnQ80Z71 1560 aa36.53■■■■□ 3.44
Srm-201ENSMUST00000006611 Top2bQ64511 1612 aa36.5■■■■□ 3.43
Srm-201ENSMUST00000006611 Eif4g3Q80XI3 1579 aaKnown RBP36.49■■■■□ 3.43
Srm-201ENSMUST00000006611 Golga3P55937 1487 aa36.46■■■■□ 3.43
Srm-201ENSMUST00000006611 Urb2E9Q7L1 1524 aaKnown RBP36.4■■■■□ 3.42
Srm-201ENSMUST00000006611 Dhx29Q6PGC1 1365 aaKnown RBP36.37■■■■□ 3.41
Srm-201ENSMUST00000006611 Il27Q8K3I6 234 aa36.34■■■■□ 3.41
Srm-201ENSMUST00000006611 Ccdc18Q640L5 1455 aa36.32■■■■□ 3.41
Srm-201ENSMUST00000006611 Plb1Q3TTY0 1478 aa36.32■■■■□ 3.4
Srm-201ENSMUST00000006611 Camsap1A2AHC3 1581 aa36.3■■■■□ 3.4
Srm-201ENSMUST00000006611 Cngb1E1AZ71 1325 aa36.28■■■■□ 3.4
Srm-201ENSMUST00000006611 LrpprcQ6PB66 1392 aaKnown RBP36.25■■■■□ 3.39
Srm-201ENSMUST00000006611 Crocc2F6XLV1 1638 aa36.17■■■■□ 3.38
Srm-201ENSMUST00000006611 Shroom2A2ALU4 1481 aa36.13■■■■□ 3.37
Srm-201ENSMUST00000006611 Fmn1Q05860 1466 aa36.06■■■■□ 3.36
Srm-201ENSMUST00000006611 PogzQ8BZH4 1409 aaKnown RBP36.04■■■■□ 3.36
Srm-201ENSMUST00000006611 Ift140E9PY46 1464 aa35.89■■■■□ 3.34
Srm-201ENSMUST00000006611 Duox2A2AQ99 1517 aa35.87■■■■□ 3.33
Srm-201ENSMUST00000006611 Rusc2Q80U22 1514 aa35.87■■■■□ 3.33
Srm-201ENSMUST00000006611 Grin2bQ01097 1482 aa35.78■■■■□ 3.32
Srm-201ENSMUST00000006611 Col17a1Q07563 1470 aa35.73■■■■□ 3.31
Srm-201ENSMUST00000006611 Disp1Q3TDN0 1521 aa35.71■■■■□ 3.31
Srm-201ENSMUST00000006611 Pabpn1Q8CCS6 302 aaKnown RBP35.71■■■■□ 3.31
Srm-201ENSMUST00000006611 Samd9lQ69Z37 1561 aa35.64■■■■□ 3.3
Srm-201ENSMUST00000006611 Setd1bQ8CFT2 1985 aa35.6■■■■□ 3.29
Srm-201ENSMUST00000006611 Nup160Q9Z0W3 1402 aaKnown RBP35.53■■■■□ 3.28
Srm-201ENSMUST00000006611 Ccdc88bQ4QRL3 1481 aa35.53■■■■□ 3.28
Srm-201ENSMUST00000006611 Efcab5A0JP43 1406 aa35.51■■■■□ 3.27
Srm-201ENSMUST00000006611 Pelp1Q9DBD5 1123 aaKnown RBP35.48■■■■□ 3.27
Srm-201ENSMUST00000006611 Pbrm1Q8BSQ9 1634 aaKnown RBP35.46■■■■□ 3.27
Srm-201ENSMUST00000006611 Cc2d2bA0A286YDU8 1405 aa35.42■■■■□ 3.26
Srm-201ENSMUST00000006611 Rad54l2Q99NG0 1466 aa35.41■■■■□ 3.26
Srm-201ENSMUST00000006611 Top2aQ01320 1528 aaKnown RBP35.37■■■■□ 3.25
Srm-201ENSMUST00000006611 Magi3Q9EQJ9 1476 aa35.32■■■■□ 3.24
Srm-201ENSMUST00000006611 NrkQ9R0G8 1455 aa35.29■■■■□ 3.24
Srm-201ENSMUST00000006611 Grin2aP35436 1464 aa35.28■■■■□ 3.24
Srm-201ENSMUST00000006611 Chic1Q8CBW7 227 aa35.26■■■■□ 3.23
Srm-201ENSMUST00000006611 Zcchc11B2RX14 1644 aaKnown RBP35.25■■■■□ 3.23
Srm-201ENSMUST00000006611 PtprkP35822 1457 aa35.23■■■■□ 3.23
Srm-201ENSMUST00000006611 AqrQ8CFQ3 1481 aaKnown RBP35.2■■■■□ 3.23
Srm-201ENSMUST00000006611 Shroom4Q1W617 1475 aa35.14■■■■□ 3.22
Srm-201ENSMUST00000006611 Pla2r1Q62028 1487 aa35.08■■■■□ 3.21
Srm-201ENSMUST00000006611 Fgd6Q69ZL1 1399 aa35.08■■■■□ 3.21
Srm-201ENSMUST00000006611 SynmQ70IV5 1561 aa35.03■■■■□ 3.2
Srm-201ENSMUST00000006611 Gpatch8A2A6A1 1505 aa35.03■■■■□ 3.2
Srm-201ENSMUST00000006611 Adgrl3Q80TS3 1537 aa34.93■■■■□ 3.18
Srm-201ENSMUST00000006611 Cep170Q6A065 1588 aa34.91■■■■□ 3.18
Srm-201ENSMUST00000006611 Gapvd1Q6PAR5 1458 aa34.9■■■■□ 3.18
Srm-201ENSMUST00000006611 AknaQ80VW7 1404 aa34.84■■■■□ 3.17
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms