RNA–Protein interactions for RNA: ENSMUST00000002177.8

Nr1h3-201, Transcript of Oxysterols receptor LXR-alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nr1h3, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3-201ENSMUST00000002177 Gm35339A0A140LHH9 1649 aa19.77■□□□□ 0.76
Nr1h3-201ENSMUST00000002177 NischQ80TM9 1593 aa19.6■□□□□ 0.73
Nr1h3-201ENSMUST00000002177 Abcc9P70170 1546 aa18.98■□□□□ 0.63
Nr1h3-201ENSMUST00000002177 Abcc8B2RUS7 1588 aa18.9■□□□□ 0.62
Nr1h3-201ENSMUST00000002177 ScribQ80U72 1612 aa18.12■□□□□ 0.49
Nr1h3-201ENSMUST00000002177 NacadQ5SWP3 1504 aa17.63■□□□□ 0.41
Nr1h3-201ENSMUST00000002177 Kdm5dQ62240 1548 aa17.59■□□□□ 0.41
Nr1h3-201ENSMUST00000002177 Dcaf1Q80TR8 1506 aa17.46■□□□□ 0.39
Nr1h3-201ENSMUST00000002177 Sycp2Q9CUU3 1500 aa17.27■□□□□ 0.35
Nr1h3-201ENSMUST00000002177 Rb1cc1Q9ESK9 1588 aa17.09■□□□□ 0.33
Nr1h3-201ENSMUST00000002177 Rhox8Q6VSS7 320 aa17.07■□□□□ 0.32
Nr1h3-201ENSMUST00000002177 BicraF8VPZ9 1578 aa16.96■□□□□ 0.31
Nr1h3-201ENSMUST00000002177 Baz1aO88379 1555 aa16.87■□□□□ 0.29
Nr1h3-201ENSMUST00000002177 Ccdc180J3QNE4 1664 aa16.86■□□□□ 0.29
Nr1h3-201ENSMUST00000002177 Crybg2B7ZCC2 1516 aa16.79■□□□□ 0.28
Nr1h3-201ENSMUST00000002177 Zcchc6Q5BLK4 1491 aaKnown RBP16.61■□□□□ 0.25
Nr1h3-201ENSMUST00000002177 Pds5bQ4VA53 1446 aaKnown RBP16.55■□□□□ 0.24
Nr1h3-201ENSMUST00000002177 Atad2bE9Q166 1460 aaKnown RBP16.4■□□□□ 0.22
Nr1h3-201ENSMUST00000002177 Smarca2Q6DIC0 1577 aa16.37■□□□□ 0.21
Nr1h3-201ENSMUST00000002177 Thoc2B1AZI6 1594 aaKnown RBP16.32■□□□□ 0.2
Nr1h3-201ENSMUST00000002177 Smarca4Q3TKT4 1613 aaKnown RBP16.29■□□□□ 0.2
Nr1h3-201ENSMUST00000002177 Dnajc5bQ9CQ94 199 aa16.29■□□□□ 0.2
Nr1h3-201ENSMUST00000002177 Cecr2E9Q2Z1 1453 aa16.24■□□□□ 0.19
Nr1h3-201ENSMUST00000002177 Ercc6F8VPZ5 1481 aa16.21■□□□□ 0.19
Nr1h3-201ENSMUST00000002177 Iqgap2Q3UQ44 1575 aa16.19■□□□□ 0.18
Nr1h3-201ENSMUST00000002177 Rtl1Q7M732 1744 aa16.18■□□□□ 0.18
Nr1h3-201ENSMUST00000002177 Cc2d2aQ8CFW7 1633 aa16.05■□□□□ 0.16
Nr1h3-201ENSMUST00000002177 Wdr62Q3U3T8 1523 aa16.03■□□□□ 0.16
Nr1h3-201ENSMUST00000002177 Frmpd1A2AKB4 1549 aa15.99■□□□□ 0.15
Nr1h3-201ENSMUST00000002177 Fam135aQ6NS59 1506 aa15.99■□□□□ 0.15
Nr1h3-201ENSMUST00000002177 Brd4Q9ESU6 1400 aaKnown RBP15.98■□□□□ 0.15
Nr1h3-201ENSMUST00000002177 CftrP26361 1476 aa15.94■□□□□ 0.14
Nr1h3-201ENSMUST00000002177 Ccdc136Q3TVA9 1136 aa15.92■□□□□ 0.14
Nr1h3-201ENSMUST00000002177 Phldb1Q6PDH0 1371 aaKnown RBP15.92■□□□□ 0.14
Nr1h3-201ENSMUST00000002177 Cttnbp2B9EJA2 1648 aa15.91■□□□□ 0.14
Nr1h3-201ENSMUST00000002177 Synj1Q8CHC4 1574 aa15.89■□□□□ 0.13
Nr1h3-201ENSMUST00000002177 Baz1bQ9Z277 1479 aa15.89■□□□□ 0.13
Nr1h3-201ENSMUST00000002177 Ubl4bQ9CQ84 188 aa15.75■□□□□ 0.11
Nr1h3-201ENSMUST00000002177 Trim41Q5NCC3 630 aa15.74■□□□□ 0.11
Nr1h3-201ENSMUST00000002177 Unc13aQ4KUS2 1712 aa15.7■□□□□ 0.1
Nr1h3-201ENSMUST00000002177 Esf1Q3V1V3 845 aaKnown RBP15.69■□□□□ 0.1
Nr1h3-201ENSMUST00000002177 Mrc2Q64449 1479 aa15.64■□□□□ 0.09
Nr1h3-201ENSMUST00000002177 Rsf1E9PWW9 1441 aaKnown RBP15.56■□□□□ 0.08
Nr1h3-201ENSMUST00000002177 Kif15Q6P9L6 1387 aa15.5■□□□□ 0.07
Nr1h3-201ENSMUST00000002177 Cux2P70298 1426 aa15.46■□□□□ 0.07
Nr1h3-201ENSMUST00000002177 Lamc3Q9R0B6 1581 aa15.44■□□□□ 0.06
Nr1h3-201ENSMUST00000002177 Golga3P55937 1487 aa15.42■□□□□ 0.06
Nr1h3-201ENSMUST00000002177 Cngb1E1AZ71 1325 aa15.36■□□□□ 0.05
Nr1h3-201ENSMUST00000002177 Top2bQ64511 1612 aa15.35■□□□□ 0.05
Nr1h3-201ENSMUST00000002177 Npm1Q61937 292 aaKnown RBP15.31■□□□□ 0.04
Nr1h3-201ENSMUST00000002177 TnnQ80Z71 1560 aa15.3■□□□□ 0.04
Nr1h3-201ENSMUST00000002177 Cep164Q5DU05 1446 aa15.28■□□□□ 0.04
Nr1h3-201ENSMUST00000002177 Ccdc18Q640L5 1455 aa15.27■□□□□ 0.03
Nr1h3-201ENSMUST00000002177 Kif21aQ9QXL2 1672 aa15.26■□□□□ 0.03
Nr1h3-201ENSMUST00000002177 Fmn1Q05860 1466 aa15.24■□□□□ 0.03
Nr1h3-201ENSMUST00000002177 Lrriq1Q0P5X1 1673 aa15.23■□□□□ 0.03
Nr1h3-201ENSMUST00000002177 Camsap1A2AHC3 1581 aa15.18■□□□□ 0.02
Nr1h3-201ENSMUST00000002177 Il27Q8K3I6 234 aa15.17■□□□□ 0.02
Nr1h3-201ENSMUST00000002177 LrpprcQ6PB66 1392 aaKnown RBP15.14■□□□□ 0.01
Nr1h3-201ENSMUST00000002177 Dhx29Q6PGC1 1365 aaKnown RBP15.14■□□□□ 0.01
Nr1h3-201ENSMUST00000002177 Crocc2F6XLV1 1638 aa15.06■□□□□ 0
Nr1h3-201ENSMUST00000002177 Urb2E9Q7L1 1524 aaKnown RBP15.05■□□□□ 0
Nr1h3-201ENSMUST00000002177 PogzQ8BZH4 1409 aaKnown RBP15.05■□□□□ 0
Nr1h3-201ENSMUST00000002177 Eif4g3Q80XI3 1579 aaKnown RBP15.05■□□□□ -0
Nr1h3-201ENSMUST00000002177 Plb1Q3TTY0 1478 aa15.05■□□□□ -0
Nr1h3-201ENSMUST00000002177 HrcG5E8J6 738 aa15.01□□□□□ -0.01
Nr1h3-201ENSMUST00000002177 Ccdc88bQ4QRL3 1481 aa15□□□□□ -0.01
Nr1h3-201ENSMUST00000002177 Grin2bQ01097 1482 aa14.99□□□□□ -0.01
Nr1h3-201ENSMUST00000002177 Duox2A2AQ99 1517 aa14.98□□□□□ -0.01
Nr1h3-201ENSMUST00000002177 Ift140E9PY46 1464 aa14.96□□□□□ -0.01
Nr1h3-201ENSMUST00000002177 Top2aQ01320 1528 aaKnown RBP14.95□□□□□ -0.02
Nr1h3-201ENSMUST00000002177 Efcab5A0JP43 1406 aa14.91□□□□□ -0.02
Nr1h3-201ENSMUST00000002177 Chic1Q8CBW7 227 aa14.9□□□□□ -0.02
Nr1h3-201ENSMUST00000002177 NrkQ9R0G8 1455 aa14.87□□□□□ -0.03
Nr1h3-201ENSMUST00000002177 Rusc2Q80U22 1514 aa14.87□□□□□ -0.03
Nr1h3-201ENSMUST00000002177 Samd9lQ69Z37 1561 aa14.85□□□□□ -0.03
Nr1h3-201ENSMUST00000002177 Disp1Q3TDN0 1521 aa14.84□□□□□ -0.03
Nr1h3-201ENSMUST00000002177 Shroom2A2ALU4 1481 aa14.82□□□□□ -0.04
Nr1h3-201ENSMUST00000002177 Shroom4Q1W617 1475 aa14.8□□□□□ -0.04
Nr1h3-201ENSMUST00000002177 Pbrm1Q8BSQ9 1634 aaKnown RBP14.79□□□□□ -0.04
Nr1h3-201ENSMUST00000002177 Cc2d2bA0A286YDU8 1405 aa14.78□□□□□ -0.04
Nr1h3-201ENSMUST00000002177 Nup160Q9Z0W3 1402 aaKnown RBP14.78□□□□□ -0.04
Nr1h3-201ENSMUST00000002177 PtprkP35822 1457 aa14.74□□□□□ -0.05
Nr1h3-201ENSMUST00000002177 Gab3Q8BSM5 595 aa14.74□□□□□ -0.05
Nr1h3-201ENSMUST00000002177 Rad54l2Q99NG0 1466 aa14.74□□□□□ -0.05
Nr1h3-201ENSMUST00000002177 Grin2aP35436 1464 aa14.72□□□□□ -0.05
Nr1h3-201ENSMUST00000002177 Magi3Q9EQJ9 1476 aa14.71□□□□□ -0.06
Nr1h3-201ENSMUST00000002177 Pabpn1Q8CCS6 302 aaKnown RBP14.69□□□□□ -0.06
Nr1h3-201ENSMUST00000002177 SynmQ70IV5 1561 aa14.68□□□□□ -0.06
Nr1h3-201ENSMUST00000002177 Dnajc5P60904 198 aa14.68□□□□□ -0.06
Nr1h3-201ENSMUST00000002177 Zeb1Q64318 1117 aa14.68□□□□□ -0.06
Nr1h3-201ENSMUST00000002177 AqrQ8CFQ3 1481 aaKnown RBP14.67□□□□□ -0.06
Nr1h3-201ENSMUST00000002177 Npm2Q80W85 207 aa14.66□□□□□ -0.06
Nr1h3-201ENSMUST00000002177 Gpatch8A2A6A1 1505 aa14.65□□□□□ -0.06
Nr1h3-201ENSMUST00000002177 Pla2r1Q62028 1487 aa14.63□□□□□ -0.07
Nr1h3-201ENSMUST00000002177 Pelp1Q9DBD5 1123 aaKnown RBP14.62□□□□□ -0.07
Nr1h3-201ENSMUST00000002177 Setd1bQ8CFT2 1985 aa14.62□□□□□ -0.07
Nr1h3-201ENSMUST00000002177 Fgd6Q69ZL1 1399 aa14.6□□□□□ -0.07
Nr1h3-201ENSMUST00000002177 Mroh2bQ7M6Y6 1581 aa14.59□□□□□ -0.07
Nr1h3-201ENSMUST00000002177 Col17a1Q07563 1470 aa14.55□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms