RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 PYCR2Q96C36 320 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 NSMCE2Q96MF7 247 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 MARK1Q9P0L2 795 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 A0A1B0GTW7 788 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 KRT87PA6NCN2 255 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 SOBPA7XYQ1 873 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 CFAP99D6REC4 459 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 RASAL1O95294 804 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 EPCAMP16422 314 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 CYP2A7P20853 494 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 WEE1P30291 646 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 TMTC4Q5T4D3 741 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 THEMIS2Q5TEJ8 643 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 BEND7Q8N7W2 519 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-211ENST00000641213 L3MBTL4Q8NA19 623 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 CLHC1Q8NHS4 586 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 SP7Q8TDD2 431 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-211ENST00000641213 SELENOMQ8WWX9 145 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 NCSTNQ92542 709 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 RIOK2Q9BVS4 552 aaKnown RBP16.65■□□□□ 0.26
PHGDH-211ENST00000641213 OLAHQ9NV23 265 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 V9GYQ6 96 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 RNF103-CHMP3A0A140T963 221 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 PABPN1LA6NDY0 278 aaKnown RBP16.64■□□□□ 0.25
PHGDH-211ENST00000641213 FADS2P1A8MWK0 482 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 SYN1P17600 705 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 NELFEP18615 380 aaKnown RBP16.64■□□□□ 0.25
PHGDH-211ENST00000641213 GGT1P19440 569 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 NNMTP40261 264 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 NEK2P51955 445 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 NADK2Q4G0N4 442 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 ZNF648Q5T619 568 aaPredicted RBP16.64■□□□□ 0.25
PHGDH-211ENST00000641213 HENMT1Q5T8I9 393 aaKnown RBP16.64■□□□□ 0.25
PHGDH-211ENST00000641213 KRT80Q6KB66 452 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 SLC30A9Q6PML9 568 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 NEK10Q6ZWH5 1172 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 NECAB2Q7Z6G3 386 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 MSRB3Q8IXL7 192 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 RIMKLAQ8IXN7 391 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 GALNT15Q8N3T1 639 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 TRAM1L1Q8N609 369 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 MCOLN3Q8TDD5 553 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 OTUB2Q96DC9 234 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 RNF145Q96MT1 663 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 GRIP2Q9C0E4 1043 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 ELOVL6Q9H5J4 265 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 PNPLA3Q9NST1 481 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 IL36AQ9UHA7 158 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 SNX6Q9UNH7 406 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 SLC22A14Q9Y267 594 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 DLGAP4Q9Y2H0 992 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 KIAA1549LQ6ZVL6 1849 aa16.64■□□□□ 0.25
PHGDH-211ENST00000641213 AP2A2O94973 939 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 H6PDO95479 791 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 MT-ND1P03886 318 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 CDH1P12830 882 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 AP1S2P56377 157 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 CYP4F3Q08477 520 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 CBX2Q14781 532 aaPredicted RBP16.63■□□□□ 0.25
PHGDH-211ENST00000641213 GRASPQ7Z6J2 395 aaPredicted RBP16.63■□□□□ 0.25
PHGDH-211ENST00000641213 RASGRP3Q8IV61 690 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 DDHD1Q8NEL9 900 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 SPDYE1Q8NFV5 336 aaPredicted RBP16.63■□□□□ 0.25
PHGDH-211ENST00000641213 BPIFB1Q8TDL5 484 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 ASZ1Q8WWH4 475 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 ING5Q8WYH8 240 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 OR52E6Q96RD3 313 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 RAD9AQ99638 391 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 CHID1Q9BWS9 393 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 IKZF5Q9H5V7 419 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 C8orf4Q9NR00 106 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 DNAJC11Q9NVH1 559 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 SLC25A37Q9NYZ2 338 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.63■□□□□ 0.25
PHGDH-211ENST00000641213 OR2AG2A6NM03 316 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 H3BNH8 94 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 AREL1O15033 823 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 PRAMEF4O60810 478 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 SLCO2B1O94956 709 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 LDLRP01130 860 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 ANXA6P08133 673 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 TCF3P15923 654 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 ITPKAP23677 461 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 HOXA9P31269 272 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 RPS14P62263 151 aaKnown RBP16.63■□□□□ 0.25
PHGDH-211ENST00000641213 PHC1P78364 1004 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 PYCR3Q53H96 274 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 ZNF805Q5CZA5 627 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 ZNF697Q5TEC3 545 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 PRAMEF9Q5VWM5 478 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 AADATQ8N5Z0 425 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 LEMD2Q8NC56 503 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 CCDC115Q96NT0 180 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 ZSCAN5AQ9BUG6 496 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 THUMPD3Q9BV44 507 aaKnown RBP16.63■□□□□ 0.25
PHGDH-211ENST00000641213 ATG10Q9H0Y0 220 aa16.63■□□□□ 0.25
PHGDH-211ENST00000641213 NFKBIL1Q9UBC1 381 aaPredicted RBP16.63■□□□□ 0.25
PHGDH-211ENST00000641213 TCF20Q9UGU0 1960 aaKnown RBP16.62■□□□□ 0.25
PHGDH-211ENST00000641213 TMEM202A6NGA9 273 aa16.62■□□□□ 0.25
PHGDH-211ENST00000641213 XYLBO75191 536 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms