RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 SHC1P29353 583 aa4.08□□□□□ -1.76
CCDC7-216ENST00000640058 SLC6A6P31641 620 aa4.08□□□□□ -1.76
CCDC7-216ENST00000640058 ACSL1P33121 698 aa4.08□□□□□ -1.76
CCDC7-216ENST00000640058 HNF4AP41235 474 aa4.08□□□□□ -1.76
CCDC7-216ENST00000640058 RPL21P46778 160 aaKnown RBP4.08□□□□□ -1.76
CCDC7-216ENST00000640058 PNLIPRP2P54317 469 aa4.08□□□□□ -1.76
CCDC7-216ENST00000640058 IGSF11Q5DX21 431 aa4.08□□□□□ -1.76
CCDC7-216ENST00000640058 XKR3Q5GH77 459 aa4.08□□□□□ -1.76
CCDC7-216ENST00000640058 TCTEX1D4Q5JR98 221 aa4.08□□□□□ -1.76
CCDC7-216ENST00000640058 ELFN2Q5R3F8 820 aa4.08□□□□□ -1.76
CCDC7-216ENST00000640058 PAQR6Q6TCH4 344 aa4.08□□□□□ -1.76
CCDC7-216ENST00000640058 FIP1L1Q6UN15 594 aaKnown RBP4.08□□□□□ -1.76
CCDC7-216ENST00000640058 Q6ZRP5 223 aa4.08□□□□□ -1.76
CCDC7-216ENST00000640058 C17orf53Q8N3J3 647 aaPredicted RBP4.08□□□□□ -1.76
CCDC7-216ENST00000640058 MARVELD2Q8N4S9 558 aa4.08□□□□□ -1.76
CCDC7-216ENST00000640058 AFAP1Q8N556 730 aa4.08□□□□□ -1.76
CCDC7-216ENST00000640058 SMAP2Q8WU79 429 aaPredicted RBP4.08□□□□□ -1.76
CCDC7-216ENST00000640058 PHLDA1Q8WV24 401 aaPredicted RBP4.08□□□□□ -1.76
CCDC7-216ENST00000640058 OLFM1Q99784 485 aa4.08□□□□□ -1.76
CCDC7-216ENST00000640058 CHCHD6Q9BRQ6 235 aa4.08□□□□□ -1.76
CCDC7-216ENST00000640058 FGF21Q9NSA1 209 aa4.08□□□□□ -1.76
CCDC7-216ENST00000640058 ZNF701Q9NV72 531 aaPredicted RBP4.08□□□□□ -1.76
CCDC7-216ENST00000640058 PANK4Q9NVE7 773 aa4.08□□□□□ -1.76
CCDC7-216ENST00000640058 SUCLA2Q9P2R7 463 aaPredicted RBP4.08□□□□□ -1.76
CCDC7-216ENST00000640058 A0A1W2PQ09 198 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 MEX3AA1L020 520 aaKnown RBP4.07□□□□□ -1.76
CCDC7-216ENST00000640058 OR2A25A4D2G3 310 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 ANKUB1A6NFN9 424 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 DOK2O60496 412 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 IGHV4-31P0DP07 118 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 GJA1P17302 382 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 PTPN3P26045 913 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 GCH1P30793 250 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 PSMB10P40306 273 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 PAX9P55771 341 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 GSDMDP57764 484 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 MC1RQ01726 317 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 SPDYCQ5MJ68 293 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 DHRS7BQ6IAN0 325 aaPredicted RBP4.07□□□□□ -1.76
CCDC7-216ENST00000640058 BTN2A1Q7KYR7 527 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 KBTBD6Q86V97 674 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 CEP57Q86XR8 500 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 LMNTD2Q8IXW0 634 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 NPEPL1Q8NDH3 523 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 ZNF519Q8TB69 540 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 CCDC34Q96HJ3 373 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 NEK1Q96PY6 1258 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 USP28Q96RU2 1077 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 LRRC61Q9BV99 259 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 SYNCQ9H7C4 482 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 SPHK2Q9NRA0 654 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 WSB2Q9NYS7 404 aaPredicted RBP4.07□□□□□ -1.76
CCDC7-216ENST00000640058 NUDT4Q9NZJ9 180 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 TNNQ9UQP3 1299 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 PPP2R2CQ9Y2T4 447 aa4.07□□□□□ -1.76
CCDC7-216ENST00000640058 PTRH2Q9Y3E5 179 aaKnown RBP4.07□□□□□ -1.76
CCDC7-216ENST00000640058 COL5A2P05997 1499 aaPredicted RBP4.06□□□□□ -1.76
CCDC7-216ENST00000640058 RNASEH1O60930 286 aaKnown RBP4.06□□□□□ -1.76
CCDC7-216ENST00000640058 BAIAP3O94812 1187 aa4.06□□□□□ -1.76
CCDC7-216ENST00000640058 HSPA8P11142 646 aaKnown RBP4.06□□□□□ -1.76
CCDC7-216ENST00000640058 CDH3P22223 829 aa4.06□□□□□ -1.76
CCDC7-216ENST00000640058 UGT1A4P22310 534 aa4.06□□□□□ -1.76
CCDC7-216ENST00000640058 JAK1P23458 1154 aa4.06□□□□□ -1.76
CCDC7-216ENST00000640058 PAX3P23760 479 aa4.06□□□□□ -1.76
CCDC7-216ENST00000640058 HERV-K104P61576 105 aa4.06□□□□□ -1.76
CCDC7-216ENST00000640058 NR1D2Q14995 579 aa4.06□□□□□ -1.76
CCDC7-216ENST00000640058 TAF1BQ53T94 588 aaPredicted RBP4.06□□□□□ -1.76
CCDC7-216ENST00000640058 WLSQ5T9L3 541 aa4.06□□□□□ -1.76
CCDC7-216ENST00000640058 C20orf194Q5TEA3 1177 aa4.06□□□□□ -1.76
CCDC7-216ENST00000640058 TMEM207Q6UWW9 146 aa4.06□□□□□ -1.76
CCDC7-216ENST00000640058 SZRD1Q7Z422 152 aa4.06□□□□□ -1.76
CCDC7-216ENST00000640058 GPRC5AQ8NFJ5 357 aa4.06□□□□□ -1.76
CCDC7-216ENST00000640058 CCDC107Q8WV48 283 aa4.06□□□□□ -1.76
CCDC7-216ENST00000640058 FAM120BQ96EK7 910 aaKnown RBP4.06□□□□□ -1.76
CCDC7-216ENST00000640058 ZNF486Q96H40 463 aaPredicted RBP4.06□□□□□ -1.76
CCDC7-216ENST00000640058 NSMCE3Q96MG7 304 aa4.06□□□□□ -1.76
CCDC7-216ENST00000640058 SHARPINQ9H0F6 387 aa4.06□□□□□ -1.76
CCDC7-216ENST00000640058 GRID1Q9ULK0 1009 aa4.06□□□□□ -1.76
CCDC7-216ENST00000640058 PCDH11YQ9BZA8 1340 aa4.05□□□□□ -1.76
CCDC7-216ENST00000640058 AGAP14A8MT82 685 aa4.05□□□□□ -1.76
CCDC7-216ENST00000640058 MEIS2O14770 477 aa4.05□□□□□ -1.76
CCDC7-216ENST00000640058 ZBED4O75132 1171 aa4.05□□□□□ -1.76
CCDC7-216ENST00000640058 AVILO75366 819 aa4.05□□□□□ -1.76
CCDC7-216ENST00000640058 DDHD2O94830 711 aa4.05□□□□□ -1.76
CCDC7-216ENST00000640058 LEPRP48357 1165 aaKnown RBP4.05□□□□□ -1.76
CCDC7-216ENST00000640058 NRIP1P48552 1158 aa4.05□□□□□ -1.76
CCDC7-216ENST00000640058 LBX1P52954 281 aa4.05□□□□□ -1.76
CCDC7-216ENST00000640058 MS4A2Q01362 244 aa4.05□□□□□ -1.76
CCDC7-216ENST00000640058 GCNT1Q02742 428 aa4.05□□□□□ -1.76
CCDC7-216ENST00000640058 ZNF415Q09FC8 603 aa4.05□□□□□ -1.76
CCDC7-216ENST00000640058 DUSP28Q4G0W2 176 aa4.05□□□□□ -1.76
CCDC7-216ENST00000640058 TMEM211Q6ICI0 200 aa4.05□□□□□ -1.76
CCDC7-216ENST00000640058 TMEM173Q86WV6 379 aaPredicted RBP4.05□□□□□ -1.76
CCDC7-216ENST00000640058 AMER3Q8N944 861 aa4.05□□□□□ -1.76
CCDC7-216ENST00000640058 OR52N5Q8NH56 324 aa4.05□□□□□ -1.76
CCDC7-216ENST00000640058 NECTIN4Q96NY8 510 aa4.05□□□□□ -1.76
CCDC7-216ENST00000640058 KIFC3Q9BVG8 833 aa4.05□□□□□ -1.76
CCDC7-216ENST00000640058 PITPNM3Q9BZ71 974 aa4.05□□□□□ -1.76
CCDC7-216ENST00000640058 OR2B2Q9GZK3 357 aa4.05□□□□□ -1.76
CCDC7-216ENST00000640058 SERINC1Q9NRX5 453 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms