RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 TRIP10Q15642 601 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 SLC1A5Q15758 541 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 DUSP6Q16828 381 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 PLAC9Q5JTB6 97 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 TRIQKQ629K1 86 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 CNKSR3Q6P9H4 555 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 USP45Q70EL2 814 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 OTOAQ7RTW8 1153 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 PPP1R3BQ86XI6 285 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 ZNF283Q8N7M2 679 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 SEMA6DQ8NFY4 1073 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 WDR48Q8TAF3 677 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 ACTRT1Q8TDG2 376 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 RIT1Q92963 219 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 C2orf88Q9BSF0 95 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 ADAMTS10Q9H324 1103 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 DYRK4Q9NR20 520 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 USP36Q9P275 1121 aaKnown RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 TLR6Q9Y2C9 796 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 PTPRFP10586 1907 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 PSMD12O00232 456 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 RNASEH1O60930 286 aaKnown RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 NDUFA10O95299 355 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 GSRP00390 522 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 GH2P01242 217 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 IL7P13232 177 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 FGFR3P22607 806 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 NCKAP1LP55160 1127 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 MBTD1Q05BQ5 628 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 POU4F2Q12837 409 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 MTAPQ13126 283 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 SF1Q15637 639 aaKnown RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 COQ5Q5HYK3 327 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 EFCAB12Q6NXP0 572 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 VASH2Q86V25 355 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 ZNF655Q8N720 491 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 DMRTB1Q96MA1 342 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 VAT1Q99536 393 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 SMOQ99835 787 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 VPS25Q9BRG1 176 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 PRRG3Q9BZD7 231 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 METTL7AQ9H8H3 244 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 TMBIM4Q9HC24 238 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 KLHL8Q9P2G9 620 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 PCDHB11Q9Y5F2 797 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 PLCH2O75038 1416 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 PRR14LQ5THK1 2151 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 BIVM-ERCC5R4GMW8 1640 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 DNAJC25-GNG10A0A024R161 153 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 NPHP3-ACAD11A0A0J9YXS1 232 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 GSG1L2A8MUP6 293 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 WASH4PA8MWX3 477 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 KAT7O95251 611 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 MT-CO1P00395 513 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 ALPPP05187 535 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 ENO1P06733 434 aaKnown RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 ALPPL2P10696 532 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 GSPT1P15170 499 aaKnown RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 EIF2AK2P19525 551 aaKnown RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 ITIH2P19823 946 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 OR1E1P30953 314 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 KIF19Q2TAC6 998 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 GXYLT1Q4G148 440 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 CCDC157Q569K6 752 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 AGAP6Q5VW22 663 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 FBXO31Q5XUX0 539 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 KCTD11Q693B1 232 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 ZBTB49Q6ZSB9 765 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 GDPD3Q7L5L3 318 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 GID4Q8IVV7 300 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 GCNT2Q8N0V5 402 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 KCNE4Q8WWG9 221 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 TOP1MTQ969P6 601 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 AGAP4Q96P64 663 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 PHB2Q99623 299 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 SEPT5Q99719 369 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 AIF1LQ9BQI0 150 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 MXRA8Q9BRK3 442 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 CHODLQ9H9P2 273 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 SERINC1Q9NRX5 453 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 DPP3Q9NY33 737 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 DHRS7Q9Y394 339 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 CDK13Q14004 1512 aaKnown RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 UGGT2Q9NYU1 1516 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 AGAP5A6NIR3 686 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 F8VP50 259 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 ADAMDEC1O15204 470 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 CFLARO15519 480 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 ADRB3P13945 408 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 PFKLP17858 780 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 ALDH9A1P49189 494 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 RGS1Q08116 209 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 PTK6Q13882 451 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 TFDP2Q14188 446 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 GAS6Q14393 721 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 SLC36A3Q495N2 470 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 BEND3Q5T5X7 828 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 RNF43Q68DV7 783 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 KIAA1161Q6NSJ0 714 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 LRRN1Q6UXK5 716 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms