RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 A8MVM7 634 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 CREBL2O60519 120 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-212ENST00000636194 COQ9O75208 318 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 GTF2F2P13984 249 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 SCTRP47872 440 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF84P51523 738 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 CLCN5P51795 746 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF132P52740 706 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 NAE1Q13564 534 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 NOXRED1Q6NXP6 359 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 FAM35AQ86V20 835 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 NIPA2Q8N8Q9 360 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 RCBTB1Q8NDN9 531 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 STK35Q8TDR2 534 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 S100A16Q96FQ6 103 aaKnown RBP5.92□□□□□ -1.46
SCN1A-212ENST00000636194 HERPUD2Q9BSE4 406 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 TLR10Q9BXR5 811 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 ADAM28Q9UKQ2 775 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 PTCH2Q9Y6C5 1203 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 YLPM1P49750 1951 aaKnown RBP5.92□□□□□ -1.46
SCN1A-212ENST00000636194 LOC102723532A0A0G2JNH3 316 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 DUXAA6NLW8 204 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 PDHXO00330 501 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 FPGTO14772 594 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 SEC14L2O76054 403 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 LRATO95237 230 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 TSPAN15O95858 294 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 AKR1C4P17516 323 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 UGT1A1P22309 533 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 CCNOP22674 350 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 CXCR3P49682 368 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 GSTM4Q03013 218 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 MAP4K2Q12851 820 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 BAATQ14032 418 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-212ENST00000636194 RBM39Q14498 530 aaKnown RBP5.92□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF169Q14929 603 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-212ENST00000636194 FAM180BQ6P0A1 224 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 FAM111BQ6SJ93 734 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 PAQR7Q86WK9 346 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 MINDY1Q8N5J2 469 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 FRS2Q8WU20 508 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 TCEAL4Q96EI5 215 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 IPPKQ9H8X2 491 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 IL20RAQ9UHF4 553 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 SLC22A14Q9Y267 594 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 PRAG1Q86YV5 1406 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 CRYM-AS1A6NIL9 109 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 ABCB7O75027 752 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 OAZ2O95190 189 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 ATE1O95260 518 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 CFIP05156 583 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 LPOP22079 712 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-212ENST00000636194 EPHA4P54764 986 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 CTBP2P56545 445 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 CLRN1P58418 232 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF33AQ06730 810 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 ADAM15Q13444 863 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 ACSM3Q53FZ2 586 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 C9orf131Q5VYM1 1079 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 ANKS1BQ7Z6G8 1248 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 METTL16Q86W50 562 aaKnown RBP5.92□□□□□ -1.46
SCN1A-212ENST00000636194 MITD1Q8WV92 249 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 SORCS1Q8WY21 1168 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 LMLNQ96KR4 655 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 DGAT2Q96PD7 388 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 FN3KRPQ9HA64 309 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 MYOZ2Q9NPC6 264 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 GMEB2Q9UKD1 530 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 CORO1CQ9ULV4 474 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-212ENST00000636194 CPSF4LA6NMK7 179 aaKnown RBP5.91□□□□□ -1.46
SCN1A-212ENST00000636194 BCKDKO14874 412 aa5.91□□□□□ -1.46
SCN1A-212ENST00000636194 TBX1O43435 398 aa5.91□□□□□ -1.46
SCN1A-212ENST00000636194 AHSA1O95433 338 aa5.91□□□□□ -1.46
SCN1A-212ENST00000636194 WDPCPO95876 746 aa5.91□□□□□ -1.46
SCN1A-212ENST00000636194 CYP11B2P19099 503 aa5.91□□□□□ -1.46
SCN1A-212ENST00000636194 GRB2P62993 217 aaKnown RBP5.91□□□□□ -1.46
SCN1A-212ENST00000636194 CHRFAM7AQ494W8 412 aa5.91□□□□□ -1.46
SCN1A-212ENST00000636194 ANGEL2Q5VTE6 544 aaKnown RBP5.91□□□□□ -1.46
SCN1A-212ENST00000636194 PAPD4Q6PIY7 484 aaKnown RBP5.91□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF589Q86UQ0 364 aaPredicted RBP5.91□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF676Q8N7Q3 588 aa5.91□□□□□ -1.46
SCN1A-212ENST00000636194 NPLOC4Q8TAT6 608 aa5.91□□□□□ -1.46
SCN1A-212ENST00000636194 GPT2Q8TD30 523 aa5.91□□□□□ -1.46
SCN1A-212ENST00000636194 SPRYD4Q8WW59 207 aaPredicted RBP5.91□□□□□ -1.46
SCN1A-212ENST00000636194 ACOT11Q8WXI4 607 aaPredicted RBP5.91□□□□□ -1.46
SCN1A-212ENST00000636194 FRZBQ92765 325 aa5.91□□□□□ -1.46
SCN1A-212ENST00000636194 SLC41A3Q96GZ6 507 aa5.91□□□□□ -1.46
SCN1A-212ENST00000636194 OR2M4Q96R27 311 aa5.91□□□□□ -1.46
SCN1A-212ENST00000636194 KIAA1522Q9P206 1035 aaPredicted RBP5.91□□□□□ -1.46
SCN1A-212ENST00000636194 PMF1-BGLAPU3KQ54 211 aa5.91□□□□□ -1.46
SCN1A-212ENST00000636194 SPHKAPQ2M3C7 1700 aa5.91□□□□□ -1.46
SCN1A-212ENST00000636194 hCG_1807616A0A1W2PRN6 198 aa5.91□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF705EA8MWA4 302 aaPredicted RBP5.91□□□□□ -1.46
SCN1A-212ENST00000636194 DLX3O60479 287 aa5.91□□□□□ -1.46
SCN1A-212ENST00000636194 NME6O75414 186 aaPredicted RBP5.91□□□□□ -1.46
SCN1A-212ENST00000636194 RARGP13631 454 aa5.91□□□□□ -1.46
SCN1A-212ENST00000636194 HTR2AP28223 471 aa5.91□□□□□ -1.46
SCN1A-212ENST00000636194 MC4RP32245 332 aa5.91□□□□□ -1.46
SCN1A-212ENST00000636194 SCNN1AP37088 669 aa5.91□□□□□ -1.46
SCN1A-212ENST00000636194 RFC3P40938 356 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms