RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 MAGEC3Q8TD91 643 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 MCOLN3Q8TDD5 553 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 RHBDD1Q8TEB9 315 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 JPH3Q8WXH2 748 aaPredicted RBP8.28□□□□□ -1.08
SGMS1-211ENST00000626236 DLG3Q92796 817 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 ALKBH8Q96BT7 664 aaKnown RBP8.28□□□□□ -1.08
SGMS1-211ENST00000626236 TLCD1Q96CP7 247 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 HIST1H2AHQ96KK5 128 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 PKNOX2Q96KN3 472 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 CNDP2Q96KP4 475 aaKnown RBP8.28□□□□□ -1.08
SGMS1-211ENST00000626236 ATP6V1G3Q96LB4 118 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 CAMK1GQ96NX5 476 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 HIST1H2AJQ99878 128 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 H2AFJQ9BTM1 129 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 SLC12A9Q9BXP2 914 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 TRIM54Q9BYV2 358 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 TFB2MQ9H5Q4 396 aaKnown RBP8.28□□□□□ -1.08
SGMS1-211ENST00000626236 MKS1Q9NXB0 559 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 NCKIPSDQ9NZQ3 722 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 TMEM216Q9P0N5 145 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 CPSF2Q9P2I0 782 aaKnown RBP8.28□□□□□ -1.08
SGMS1-211ENST00000626236 LRIT1Q9P2V4 623 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 XPR1Q9UBH6 696 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 POLG2Q9UHN1 485 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 PADI4Q9UM07 663 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 PDE10AQ9Y233 779 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 OARD1Q9Y530 152 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 ACTL7BQ9Y614 415 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 RNF215Q9Y6U7 377 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 GPR179Q6PRD1 2367 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 OTOGLQ3ZCN5 2332 aa8.28□□□□□ -1.08
SGMS1-211ENST00000626236 LY6G6EA0A0G2JKS1 128 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 CPED1A4D0V7 1026 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 SYCE1LA8MT33 242 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 SUPT3HB4E1H0 165 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 UBXN8O00124 270 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 MYO1CO00159 1063 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 PPM1DO15297 605 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 SH3BP5O60239 455 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 KDM1AO60341 852 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 KERAO60938 352 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 SUPT3HO75486 399 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 LDOC1O95751 146 aaPredicted RBP8.27□□□□□ -1.09
SGMS1-211ENST00000626236 GLB1P16278 677 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 CRHR1P34998 444 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 KCNC1P48547 511 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 PPM1FP49593 454 aaPredicted RBP8.27□□□□□ -1.09
SGMS1-211ENST00000626236 GPS2Q13227 327 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 TGFBIQ15582 683 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 PPP1R3AQ16821 1122 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 CCDC153Q494R4 210 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 GUSBP11Q6P575 273 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 TMEM26Q6ZUK4 368 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 GPSM1Q86YR5 675 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 RASGRP3Q8IV61 690 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 RBM12BQ8IXT5 1001 aaKnown RBP8.27□□□□□ -1.09
SGMS1-211ENST00000626236 RAB42Q8N4Z0 105 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 FAM181AQ8N9Y4 354 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 FBXO15Q8NCQ5 510 aaPredicted RBP8.27□□□□□ -1.09
SGMS1-211ENST00000626236 OR52E1Q8NGJ3 308 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 OR9A1PQ8NGU1 263 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 RHEBL1Q8TAI7 183 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 TCP10LQ8TDR4 215 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 LCN9Q8WX39 176 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 CCDC74AQ96AQ1 378 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 RAD51AP1Q96B01 352 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 IL17FQ96PD4 163 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 ATOH8Q96SQ7 321 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 PKP4Q99569 1192 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 SLC38A3Q99624 504 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 NRTNQ99748 197 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 EGFL8Q99944 293 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 MRPL57Q9BQC6 102 aaKnown RBP8.27□□□□□ -1.09
SGMS1-211ENST00000626236 MRPL46Q9H2W6 279 aaKnown RBP8.27□□□□□ -1.09
SGMS1-211ENST00000626236 C12orf65Q9H3J6 166 aaKnown RBP8.27□□□□□ -1.09
SGMS1-211ENST00000626236 XKR8Q9H6D3 395 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 KIR3DX1Q9H7L2 352 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 SSU72Q9NP77 194 aaKnown RBP8.27□□□□□ -1.09
SGMS1-211ENST00000626236 KCNK9Q9NPC2 374 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 ARL15Q9NXU5 204 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 NUDT4Q9NZJ9 180 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 CD274Q9NZQ7 290 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 SLC17A7Q9P2U7 560 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 FTSJ1Q9UET6 329 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 EMCNQ9ULC0 261 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 GRID1Q9ULK0 1009 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 U3KQA8 63 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 ZNF292O60281 2723 aa8.27□□□□□ -1.09
SGMS1-211ENST00000626236 CCDC189A1A4V9 331 aa8.26□□□□□ -1.09
SGMS1-211ENST00000626236 HMGB1P1B2RPK0 211 aaPredicted RBP8.26□□□□□ -1.09
SGMS1-211ENST00000626236 PRPF4O43172 522 aaKnown RBP eCLIP8.26□□□□□ -1.09
SGMS1-211ENST00000626236 NUDT21O43809 227 aaKnown RBP8.26□□□□□ -1.09
SGMS1-211ENST00000626236 TYROBPO43914 113 aa8.26□□□□□ -1.09
SGMS1-211ENST00000626236 PLIN3O60664 434 aa8.26□□□□□ -1.09
SGMS1-211ENST00000626236 SMIM24O75264 130 aa8.26□□□□□ -1.09
SGMS1-211ENST00000626236 SLC16A8O95907 504 aa8.26□□□□□ -1.09
SGMS1-211ENST00000626236 PROCP04070 461 aa8.26□□□□□ -1.09
SGMS1-211ENST00000626236 ANXA5P08758 320 aa8.26□□□□□ -1.09
SGMS1-211ENST00000626236 TPBGLP0DKB5 382 aa8.26□□□□□ -1.09
SGMS1-211ENST00000626236 CKMT1AP12532 417 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms