RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 ASZ1Q8WWH4 475 aa17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 CPT1BQ92523 772 aa17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 TRIM56Q9BRZ2 755 aaKnown RBP17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 TSSK1BQ9BXA7 367 aa17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 LATS2Q9NRM7 1088 aa17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 OR6C2Q9NZP2 312 aa17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 KCND3Q9UK17 655 aa17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 PCDHGA6Q9Y5G7 932 aa17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 TMEM150CB9EJG8 249 aa17.36■□□□□ 0.37
SCAMP4-213ENST00000621748 CPNE3O75131 537 aaKnown RBP17.36■□□□□ 0.37
SCAMP4-213ENST00000621748 SLCO2B1O94956 709 aa17.36■□□□□ 0.37
SCAMP4-213ENST00000621748 APOA4P06727 396 aa17.36■□□□□ 0.37
SCAMP4-213ENST00000621748 MSL3P1P0C860 447 aa17.36■□□□□ 0.37
SCAMP4-213ENST00000621748 CDHR3Q6ZTQ4 885 aa17.36■□□□□ 0.37
SCAMP4-213ENST00000621748 BBOF1Q8ND07 529 aa17.36■□□□□ 0.37
SCAMP4-213ENST00000621748 CFAP61Q8NHU2 1237 aa17.36■□□□□ 0.37
SCAMP4-213ENST00000621748 SLCO2A1Q92959 643 aa17.36■□□□□ 0.37
SCAMP4-213ENST00000621748 ADNPQ9H2P0 1102 aa17.36■□□□□ 0.37
SCAMP4-213ENST00000621748 FAM60AQ9NP50 221 aa17.36■□□□□ 0.37
SCAMP4-213ENST00000621748 PCDHB3Q9Y5E6 796 aa17.36■□□□□ 0.37
SCAMP4-213ENST00000621748 C21orf140B9A014 251 aa17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 TTI1O43156 1089 aa17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 CREG1O75629 220 aa17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 RPS3P23396 243 aaKnown RBP eCLIP17.35■□□□□ 0.379e-7■□□□□ 11.2
SCAMP4-213ENST00000621748 PEBP1P30086 187 aaKnown RBP17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 EIF3BP55884 814 aaKnown RBP17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 NFKB2Q00653 900 aa17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 KCNAB2Q13303 367 aa17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 PTK6Q13882 451 aa17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 GRB7Q14451 532 aa17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 ZIC1Q15915 447 aa17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 GLE1Q53GS7 698 aaKnown RBP17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 CTSL3PQ5NE16 218 aa17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 PLEKHS1Q5SXH7 462 aa17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 LCN10Q6JVE6 187 aa17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 ZNF517Q6ZMY9 492 aaPredicted RBP17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 TMEM135Q86UB9 458 aa17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 OTUD6BQ8N6M0 293 aa17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 LMNTD1Q8N9Z9 388 aa17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 BIRC8Q96P09 236 aa17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 MENTQ9BUN1 341 aa17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 SLC25A18Q9H1K4 315 aa17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 ACTL8Q9H568 366 aa17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 FANCEQ9HB96 536 aa17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 SYTL2Q9HCH5 934 aa17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 CIDEBQ9UHD4 219 aa17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 GNPTGQ9UJJ9 305 aa17.35■□□□□ 0.37
SCAMP4-213ENST00000621748 FER1L5A0AVI2 2057 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 EFCAB8A8MWE9 144 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 GOLGA8MH3BSY2 632 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 MAP3K7O43318 606 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 HCRTR1O43613 425 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 PKLRP30613 574 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 FMO4P31512 558 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 RPS18P62269 152 aaKnown RBP17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 CALCOCO2Q13137 446 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 KYNUQ16719 465 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 TYSND1Q2T9J0 566 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 KIAA0930Q6ICG6 404 aaPredicted RBP17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 MRNIPQ6NTE8 343 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 CASC4Q6P4E1 433 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 SDCCAG8Q86SQ7 713 aaPredicted RBP17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 HOOK3Q86VS8 718 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 LRRC6Q86X45 466 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 FAM20CQ8IXL6 584 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 C19orf47Q8N9M1 422 aaKnown RBP17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 MCUQ8NE86 351 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 APOBEC4Q8WW27 367 aaKnown RBP17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 LPGAT1Q92604 370 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 MR1Q95460 341 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 LRFN5Q96NI6 719 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 PANX3Q96QZ0 392 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 CHST8Q9H2A9 424 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 IL1RAPL1Q9NZN1 696 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 SERTAD3Q9UJW9 196 aa17.34■□□□□ 0.37
SCAMP4-213ENST00000621748 ISM1B1AKI9 464 aa17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 MEN1O00255 615 aa17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 MLNP12872 115 aa17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 PTPN4P29074 926 aa17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 RORAP35398 523 aa17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 PTGIRP43119 386 aa17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 GABRA4P48169 554 aa17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 RAB28P51157 221 aa17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 TMED2Q15363 201 aa17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 ARMC3Q5W041 872 aa17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 UNC5DQ6UXZ4 953 aa17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 OTOAQ7RTW8 1153 aa17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 DCUN1D3Q8IWE4 304 aa17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 DSELQ8IZU8 1212 aa17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 AGGF1Q8N302 714 aaeCLIP17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 MMGT1Q8N4V1 131 aa17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 C2orf73Q8N5S3 287 aaPredicted RBP17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 LINC01555Q8NAE3 123 aa17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 TCTN2Q96GX1 697 aa17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 SNF8Q96H20 258 aa17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 SERPINB12Q96P63 405 aa17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 IL17FQ96PD4 163 aa17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 TCF12Q99081 682 aa17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 GPR87Q9BY21 358 aa17.33■□□□□ 0.36
SCAMP4-213ENST00000621748 TRIM31Q9BZY9 425 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms