RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 USP1O94782 785 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 SEC31AO94979 1220 aaKnown RBP6.35□□□□□ -1.39
BRCC3-209ENST00000620502 C9P02748 559 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 FTH1P02794 183 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 SLC35G4P0C7Q5 338 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 OR56A5P0C7T3 313 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 TPBGLP0DKB5 382 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 THRAP10827 490 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 HGFP14210 728 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 RPS3P23396 243 aaKnown RBP eCLIP6.35□□□□□ -1.39
BRCC3-209ENST00000620502 ACADLP28330 430 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 RPL21P46778 160 aaKnown RBP6.35□□□□□ -1.39
BRCC3-209ENST00000620502 CD151P48509 253 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 TTPAP49638 278 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 ITGA8P53708 1063 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 GABREP78334 506 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 C2orf54Q08AI8 447 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 RPA4Q13156 261 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 C16orf72Q14CZ0 275 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 MORF4L2Q15014 288 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 ST3GAL2Q16842 350 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 TYSND1Q2T9J0 566 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 MAP9Q49MG5 647 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 ZNF789Q5FWF6 425 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 C3orf38Q5JPI3 329 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 AARS2Q5JTZ9 985 aaKnown RBP6.35□□□□□ -1.39
BRCC3-209ENST00000620502 CTSL3PQ5NE16 218 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 PHF19Q5T6S3 580 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 NEPROQ6NW34 567 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 DUS1LQ6P1R4 473 aaKnown RBP6.35□□□□□ -1.39
BRCC3-209ENST00000620502 CASC4Q6P4E1 433 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 NAPRTQ6XQN6 538 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 CENPUQ71F23 418 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 RAB11FIP2Q7L804 512 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 ARHGAP22Q7Z5H3 698 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 DTX1Q86Y01 620 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 TRIM48Q8IWZ4 208 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 RBM12BQ8IXT5 1001 aaKnown RBP6.35□□□□□ -1.39
BRCC3-209ENST00000620502 UNC5BQ8IZJ1 945 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 KRT222Q8N1A0 295 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 RCBTB1Q8NDN9 531 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 OR10G6Q8NH81 332 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 WDR36Q8NI36 951 aaKnown RBP6.35□□□□□ -1.39
BRCC3-209ENST00000620502 LKAAEAR1Q8TD35 194 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 ZFPM2Q8WW38 1151 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 JPH3Q8WXH2 748 aaPredicted RBP6.35□□□□□ -1.39
BRCC3-209ENST00000620502 NCSTNQ92542 709 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 ELMO1Q92556 727 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 LPGAT1Q92604 370 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.35□□□□□ -1.39
BRCC3-209ENST00000620502 ZNF669Q96BR6 464 aaPredicted RBP6.35□□□□□ -1.39
BRCC3-209ENST00000620502 STAMBPL1Q96FJ0 436 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 AHCYL2Q96HN2 611 aaKnown RBP6.35□□□□□ -1.39
BRCC3-209ENST00000620502 RHOVQ96L33 236 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 CCDC74BQ96LY2 380 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 C16orf45Q96MC5 204 aaPredicted RBP6.35□□□□□ -1.39
BRCC3-209ENST00000620502 C12orf66Q96MD2 445 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 SLC46A1Q96NT5 459 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 TTC1Q99614 292 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 EBNA1BP2Q99848 306 aaKnown RBP6.35□□□□□ -1.39
BRCC3-209ENST00000620502 DPYSL5Q9BPU6 564 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 WDR83Q9BRX9 315 aaKnown RBP6.35□□□□□ -1.39
BRCC3-209ENST00000620502 RSRP1Q9BUV0 290 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 CARD6Q9BX69 1037 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 RAB33BQ9H082 229 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 EPB41L1Q9H4G0 881 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 VPS37BQ9H9H4 285 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 SSU72Q9NP77 194 aaKnown RBP6.35□□□□□ -1.39
BRCC3-209ENST00000620502 ASCL3Q9NQ33 180 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 IMP3Q9NV31 184 aaKnown RBP6.35□□□□□ -1.39
BRCC3-209ENST00000620502 IL1RAPL1Q9NZN1 696 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 SLC24A2Q9UI40 661 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 CDYLQ9Y232 598 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 SNX24Q9Y343 169 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 PCDHGA8Q9Y5G5 932 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 MAD1L1Q9Y6D9 718 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 RPS6KL1Q9Y6S9 549 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 KIF26BQ2KJY2 2108 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 SPTBN2O15020 2390 aa6.35□□□□□ -1.39
BRCC3-209ENST00000620502 GOLGA4Q13439 2230 aaKnown RBP6.34□□□□□ -1.39
BRCC3-209ENST00000620502 UNC13CQ8NB66 2214 aa6.34□□□□□ -1.39
BRCC3-209ENST00000620502 NCOR2Q9Y618 2525 aa6.34□□□□□ -1.39
BRCC3-209ENST00000620502 MN1Q10571 1320 aaPredicted RBP6.34□□□□□ -1.39
BRCC3-209ENST00000620502 SRRM3A6NNA2 597 aaPredicted RBP6.34□□□□□ -1.39
BRCC3-209ENST00000620502 EFCAB8A8MWE9 144 aa6.34□□□□□ -1.39
BRCC3-209ENST00000620502 CDRT15L2A8MXV6 281 aa6.34□□□□□ -1.39
BRCC3-209ENST00000620502 AGRPO00253 132 aa6.34□□□□□ -1.39
BRCC3-209ENST00000620502 PRMT5O14744 637 aaPredicted RBP6.34□□□□□ -1.39
BRCC3-209ENST00000620502 PLD2O14939 933 aa6.34□□□□□ -1.39
BRCC3-209ENST00000620502 HGSO14964 777 aaPredicted RBP6.34□□□□□ -1.39
BRCC3-209ENST00000620502 RAD51CO43502 376 aa6.34□□□□□ -1.39
BRCC3-209ENST00000620502 DUX1O43812 170 aa6.34□□□□□ -1.39
BRCC3-209ENST00000620502 GPC4O75487 556 aa6.34□□□□□ -1.39
BRCC3-209ENST00000620502 NDUFS3O75489 264 aa6.34□□□□□ -1.39
BRCC3-209ENST00000620502 UBXN7O94888 489 aa6.34□□□□□ -1.39
BRCC3-209ENST00000620502 TNFSF15O95150 251 aa6.34□□□□□ -1.39
BRCC3-209ENST00000620502 F7P08709 466 aaPredicted RBP6.34□□□□□ -1.39
BRCC3-209ENST00000620502 FAM87AP0C7U9 286 aa6.34□□□□□ -1.39
BRCC3-209ENST00000620502 FGF3P11487 239 aaPredicted RBP6.34□□□□□ -1.39
BRCC3-209ENST00000620502 CCL4P13236 92 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms