RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 PRAMEF17Q5VTA0 474 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 PTRHD1Q6GMV3 140 aaKnown RBP9.34□□□□□ -0.91
TARDBP-218ENST00000617172 MRNIPQ6NTE8 343 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 RHBDD2Q6NTF9 364 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 LRRC8BQ6P9F7 803 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 NAPRTQ6XQN6 538 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 PRUNE1Q86TP1 453 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 TMEM135Q86UB9 458 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 HPS6Q86YV9 775 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 DCUN1D3Q8IWE4 304 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 RAB42Q8N4Z0 105 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 TMEM102Q8N9M5 508 aaPredicted RBP9.34□□□□□ -0.91
TARDBP-218ENST00000617172 GLIS1Q8NBF1 620 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 PROKR1Q8TCW9 393 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 MAGEC3Q8TD91 643 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 ADAMTS17Q8TE56 1095 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 RAD51AP1Q96B01 352 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 FOPNLQ96NB1 174 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 RUFY1Q96T51 708 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 TCF12Q99081 682 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 SLC25A23Q9BV35 468 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 KIFC1Q9BW19 673 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 KLHL25Q9H0H3 589 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 MRM3Q9HC36 420 aaKnown RBP9.34□□□□□ -0.91
TARDBP-218ENST00000617172 TREX1Q9NSU2 369 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 INTS7Q9NVH2 962 aaKnown RBP9.34□□□□□ -0.91
TARDBP-218ENST00000617172 SPHK1Q9NYA1 384 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 GNPTGQ9UJJ9 305 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 PLCL2Q9UPR0 1127 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 CDYLQ9Y232 598 aa9.34□□□□□ -0.91
TARDBP-218ENST00000617172 TENM4Q6N022 2769 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 MAGEB16A2A368 324 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 H3BMM5 538 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 ZSCAN9O15535 394 aaPredicted RBP9.33□□□□□ -0.92
TARDBP-218ENST00000617172 KLHL41O60662 606 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 S1PR4O95977 384 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 CAPN1P07384 714 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 TPBGLP0DKB5 382 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 TPSB2P20231 275 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 CD9P21926 228 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 PKLRP30613 574 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 CCNFP41002 786 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 CCL11P51671 97 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 PGDP52209 483 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 CSE1LP55060 971 aaKnown RBP9.33□□□□□ -0.92
TARDBP-218ENST00000617172 ADARP55265 1226 aaKnown RBP9.33□□□□□ -0.92
TARDBP-218ENST00000617172 DCDP81605 110 aaKnown RBP9.33□□□□□ -0.92
TARDBP-218ENST00000617172 IL10RAQ13651 578 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 SEMA3AQ14563 771 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 SSPNQ14714 243 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 TPSAB1Q15661 275 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 RNF187Q5TA31 235 aaPredicted RBP9.33□□□□□ -0.92
TARDBP-218ENST00000617172 PAPD7Q5XG87 772 aaKnown RBP9.33□□□□□ -0.92
TARDBP-218ENST00000617172 LCN10Q6JVE6 187 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 MICALCLQ6ZW33 695 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 OTOAQ7RTW8 1153 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 RAB43Q86YS6 212 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 DNAJC22Q8N4W6 341 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 OR2L8Q8NGY9 312 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 CFAP61Q8NHU2 1237 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 FLVCR1-AS1Q8TAF5 88 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 DLG3Q92796 817 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 NACC2Q96BF6 587 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 NAP1L3Q99457 506 aaPredicted RBP9.33□□□□□ -0.92
TARDBP-218ENST00000617172 NRTNQ99748 197 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 NDC1Q9BTX1 674 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 FAM60AQ9NP50 221 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 MLXIPLQ9NP71 852 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 TXLNGQ9NUQ3 528 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 GPN3Q9UHW5 284 aaPredicted RBP9.33□□□□□ -0.92
TARDBP-218ENST00000617172 SLC39A10Q9ULF5 831 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 VPS9D1Q9Y2B5 631 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 ZNF451Q9Y4E5 1061 aa9.33□□□□□ -0.92
TARDBP-218ENST00000617172 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.32□□□□□ -0.92
TARDBP-218ENST00000617172 ARGFXA6NJG6 315 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 IQCF5A8MTL0 148 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 TARM1B6A8C7 271 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 H3BMH7 237 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 K7EM74 188 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 RASGRF2O14827 1237 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 CEACAM4O75871 244 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 TMEM63AO94886 807 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 VAPBO95292 243 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 PIM1P11309 404 aaPredicted RBP9.32□□□□□ -0.92
TARDBP-218ENST00000617172 PAMP19021 973 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 VARSP26640 1264 aaKnown RBP9.32□□□□□ -0.92
TARDBP-218ENST00000617172 MAGEA6P43360 314 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 KCNJ1P48048 391 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 GABRA4P48169 554 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 ARSFP54793 590 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 CRADDP78560 199 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 SF1Q15637 639 aaKnown RBP9.32□□□□□ -0.92
TARDBP-218ENST00000617172 ZIC1Q15915 447 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 PTCHD3Q3KNS1 767 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 ZC3H12BQ5HYM0 836 aaKnown RBP9.32□□□□□ -0.92
TARDBP-218ENST00000617172 TCTE1Q5JU00 501 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 YOD1Q5VVQ6 348 aaPredicted RBP9.32□□□□□ -0.92
TARDBP-218ENST00000617172 MLIPQ5VWP3 458 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 ZNF385CQ66K41 422 aaPredicted RBP9.32□□□□□ -0.92
TARDBP-218ENST00000617172 FAM198BQ6UWH4 519 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms