RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 CD84Q9UIB8 345 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 PADI4Q9UM07 663 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 PCDHGB3Q9Y5G1 929 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 GPR45Q9Y5Y3 372 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 M0QX08 132 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 UBFD1O14562 309 aaKnown RBP5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 PGLSO95336 258 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 SLC5A2P31639 672 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 SLC6A4P31645 630 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 GPR1P46091 355 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 SEMA3AQ14563 771 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 LYPLAL1Q5VWZ2 237 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 TRIM40Q6P9F5 258 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 CRTC3Q6UUV7 619 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 BNIPLQ7Z465 357 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 TMEM151AQ8N4L1 468 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 RAB42Q8N4Z0 105 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 TERB1Q8NA31 727 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 UBE2E3Q969T4 207 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZNF419Q96HQ0 510 aaPredicted RBP5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 PRICKLE1Q96MT3 831 aaPredicted RBP5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 RBM4BQ9BQ04 359 aaKnown RBP5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 CLSTN3Q9BQT9 956 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 RBM4Q9BWF3 364 aaKnown RBP5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 TUBB1Q9H4B7 451 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 RETREG1Q9H6L5 497 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 EXD2Q9NVH0 621 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 VPS29Q9UBQ0 182 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 MAPRE3Q9UPY8 281 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 TCRBV3S1A0A5B6 114 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 MAN1A2O60476 641 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 SOCS5O75159 536 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 ERAL1O75616 437 aaKnown RBP5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 GJB3O75712 270 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 DIRAS1O95057 198 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 PCDH8O95206 1070 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 PEX11BO96011 259 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 PPP2R1BP30154 601 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 ASMTP46597 345 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 ERICH5Q6P6B1 374 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 GOLGA7Q7Z5G4 137 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 TCAIMQ8N3R3 496 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 TMEM102Q8N9M5 508 aaPredicted RBP5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 PHF10Q8WUB8 498 aaKnown RBP5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 TFAP2CQ92754 450 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 C12orf43Q96C57 262 aaKnown RBP5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZHX1-C8orf76Q96EF9 292 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 OTUB1Q96FW1 271 aaPredicted RBP5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 MYRFLQ96LU7 910 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 TSEN34Q9BSV6 310 aaKnown RBP5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 EFCAB11Q9BUY7 163 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 SMURF2Q9HAU4 748 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 CCNB1IP1Q9NPC3 277 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 ARMC1Q9NVT9 282 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 DPP7Q9UHL4 492 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 CNOT11Q9UKZ1 510 aaKnown RBP5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 NHSQ6T4R5 1651 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 ANKDD1BA6NHY2 528 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 hCG_2039718K7EN88 272 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 GNAO1P09471 354 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 IGFBP5P24593 272 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 HTR1EP28566 365 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 HOXC8P31273 242 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 DPP6P42658 865 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZNF140P52738 457 aaPredicted RBP5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 TP53BP2Q13625 1128 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 LAPTM4AQ15012 233 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 PTPRRQ15256 657 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 SYT16Q17RD7 645 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 TYSND1Q2T9J0 566 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 ATP13A5Q4VNC0 1218 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 FGD3Q5JSP0 725 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 RAET1GQ6H3X3 334 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 CES5AQ6NT32 575 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 GPR153Q6NV75 609 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 KCTD8Q6ZWB6 473 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 TMPRSS11BQ86T26 416 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 TCEAL8Q8IYN2 117 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 PHACTR4Q8IZ21 702 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 CHCHD4Q8N4Q1 142 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 SVOPQ8N4V2 548 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 RAB2BQ8WUD1 216 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 SEZ6LQ9BYH1 1024 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 SLC29A3Q9BZD2 475 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 ETAA1Q9NY74 926 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 CACNA1BQ00975 2339 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 MAGEB17A8MXT2 336 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 MANBAO00462 879 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 GRM6O15303 877 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 XPNPEP2O43895 674 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 NOBOXO60393 691 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 AOC2O75106 756 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 CDH1P12830 882 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZNF182P17025 639 aaPredicted RBP5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 TACR1P25103 407 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 CDK9P50750 372 aaKnown RBP5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 PRKAG1P54619 331 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 ACVR1Q04771 509 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 CNTN1Q12860 1018 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 GK3PQ14409 553 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms