RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 FAM172BPA6NC97 362 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 BMPR1BO00238 502 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 P2RY10O00398 339 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 CLDN4O14493 209 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 LMX1BO60663 402 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 RNASEH1O60930 286 aaKnown RBP3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 CAVIN2O95810 425 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 PENKP01210 267 aaPredicted RBP3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 IGHV2-70P01814 119 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 CYP11B2P19099 503 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 ASCL1P50553 236 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 PPIGQ13427 754 aaKnown RBP eCLIP3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 C9orf50Q5SZB4 431 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 C11orf63Q6NUN7 778 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 C19orf48Q6RUI8 117 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 PPP1R21Q6ZMI0 780 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 SLC26A9Q7LBE3 791 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 ARHGAP22Q7Z5H3 698 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 KRT77Q7Z794 578 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 SMIM29Q86T20 159 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 CUZD1Q86UP6 607 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 NR2C2APQ86WQ0 139 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 THNSL1Q8IYQ7 743 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 DNAJC22Q8N4W6 341 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 ZNF611Q8N823 705 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 IQUBQ8NA54 791 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 NPEPL1Q8NDH3 523 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 SPSB1Q96BD6 273 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 SLC47A1Q96FL8 570 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 OTUB1Q96FW1 271 aaPredicted RBP3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 WBP1Q96G27 269 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 MUS81Q96NY9 551 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 LRRC3BQ96PB8 259 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 GBP5Q96PP8 586 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 FEVQ99581 238 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 CPNE1Q99829 537 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 S1PR5Q9H228 398 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 MMP28Q9H239 520 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 BICC1Q9H694 974 aaKnown RBP3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 ZNF334Q9HCZ1 680 aaPredicted RBP3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 GKN1Q9NS71 199 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 ECHDC1Q9NTX5 307 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 COQ3Q9NZJ6 369 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 TBC1D7Q9P0N9 293 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 ICAM5Q9UMF0 924 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 LIPGQ9Y5X9 500 aa3.97□□□□□ -1.77
SMCHD1-213ENST00000609587 PCDH11YQ9BZA8 1340 aa3.96□□□□□ -1.77
SMCHD1-213ENST00000609587 A0A1W2PRQ8 180 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 DUXAA6NLW8 204 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 INHBAP08476 426 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 SCG2P13521 617 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 PAX1P15863 534 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 CD22P20273 847 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 LHX1P48742 406 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 NPY4RP50391 375 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 POLR2LP62875 67 aaKnown RBP3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 PHEXP78562 749 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 MAT1AQ00266 395 aaKnown RBP3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 LGALS3BPQ08380 585 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 MZT1Q08AG7 82 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 CUL3Q13618 768 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 ZNF273Q14593 569 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 PHLDA2Q53GA4 152 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 TECRLQ5HYJ1 363 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 WDR38Q5JTN6 314 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 STPG1Q5TH74 334 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 SLC27A1Q6PCB7 646 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 SUSD1Q6UWL2 747 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 NUP54Q7Z3B4 507 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 CCAR2Q8N163 923 aaKnown RBP3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 KLHDC9Q8NEP7 349 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 DNASE2BQ8WZ79 361 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 HSD17B8Q92506 261 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 THOC1Q96FV9 657 aaKnown RBP3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 NSL1Q96IY1 281 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 INPP4AQ96PE3 977 aaPredicted RBP3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 SPAG5Q96R06 1193 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 EGFL8Q99944 293 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 RHNO1Q9BSD3 238 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 A4GALTQ9NPC4 353 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 ACAD8Q9UKU7 415 aa3.96□□□□□ -1.78
SMCHD1-213ENST00000609587 FLT1P17948 1338 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 CCDC188H7C350 402 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 PIGNO95427 931 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 ACSL3O95573 720 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 IGLV2-11P01706 119 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 PRSS1P07477 247 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 IGHV4-38-2P0DP08 117 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 HAPLN1P10915 354 aaPredicted RBP3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 HSPA8P11142 646 aaKnown RBP3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 IFNAR1P17181 557 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 JAK1P23458 1154 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 COPB2P35606 906 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 DCTP40126 519 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 GP5P40197 560 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 MNDAP41218 407 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 PPARDQ03181 441 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 CA9Q16790 459 aa3.95□□□□□ -1.78
SMCHD1-213ENST00000609587 TCTE1Q5JU00 501 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms