RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 DHRS1Q96LJ7 313 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 HSD17B14Q9BPX1 270 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 SDCBP2Q9H190 292 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 TVP23BQ9NYZ1 205 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 MSRAQ9UJ68 235 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 DERAQ9Y315 318 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 EI24O14681 340 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 C8GP07360 202 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 PRPS2P11908 318 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 GNAZP19086 355 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 ALAS2P22557 587 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 LHCGRP22888 699 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 S100A12P80511 92 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 DSC2Q02487 901 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 ANKRD26P1Q6NSI1 321 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 IQCHQ86VS3 1027 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 HDDC3Q8N4P3 179 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 PRICKLE1Q96MT3 831 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-217ENST00000602723 CCDC86Q9H6F5 360 aaKnown RBP9.44□□□□□ -0.9
CSMD1-217ENST00000602723 CDH7Q9ULB5 785 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 SPATA31A6Q5VVP1 1343 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 I3L521 148 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 GADD45GO95257 159 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 ZNF823P16415 610 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 GRK6P43250 576 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 SLC13A2Q13183 592 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 PRKD1Q15139 912 aaPredicted RBP9.43□□□□□ -0.9
CSMD1-217ENST00000602723 TLR1Q15399 786 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 ARSHQ5FYA8 562 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 TNFAIP8L2Q6P589 184 aaPredicted RBP9.43□□□□□ -0.9
CSMD1-217ENST00000602723 CPNE9Q8IYJ1 553 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 MPP5Q8N3R9 675 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 OXR1Q8N573 874 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 SIDT2Q8NBJ9 832 aaKnown RBP9.43□□□□□ -0.9
CSMD1-217ENST00000602723 OR2L2Q8NH16 312 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 RIPOR3Q96MK2 946 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 RNF38Q9H0F5 515 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 OAZ3Q9UMX2 235 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 CCL22O00626 93 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 SEPT4O43236 478 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 GOT2P00505 430 aaKnown RBP9.43□□□□□ -0.9
CSMD1-217ENST00000602723 MTHFD1P11586 935 aaKnown RBP9.43□□□□□ -0.9
CSMD1-217ENST00000602723 PTP4A2Q12974 167 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 CHIT1Q13231 466 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 MAPK14Q16539 360 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 TMEM17Q86X19 198 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 JOSD2Q8TAC2 188 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 METTL21AQ8WXB1 218 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 RIT1Q92963 219 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 PCDHB18PQ96TA0 734 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 ARHGEF4Q9NR80 690 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 C1orf109Q9NX04 203 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 ZNF282Q9UDV7 671 aaPredicted RBP9.43□□□□□ -0.9
CSMD1-217ENST00000602723 GRIN2DO15399 1336 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 OR6C75A6NL08 312 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 SLC33A1O00400 549 aaPredicted RBP9.43□□□□□ -0.9
CSMD1-217ENST00000602723 NUAK1O60285 661 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 SLC35G6P0C7Q6 338 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 SPATA31C1P0DKV0 1188 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 CDH1P12830 882 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 SLC15A1P46059 708 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 TUBA1BP68363 451 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 MINDY4Q4G0A6 757 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 SLC9B1Q4ZJI4 515 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 KLHL26Q53HC5 615 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 ANKRD22Q5VYY1 191 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 TUBA1AQ71U36 451 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 CIR1Q86X95 450 aaPredicted RBP9.43□□□□□ -0.9
CSMD1-217ENST00000602723 TOMM5Q8N4H5 51 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 THAP6Q8TBB0 222 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 HIST1H2AAQ96QV6 131 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 DNAJB9Q9UBS3 223 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 CORO1AP31146 461 aaKnown RBP9.43□□□□□ -0.9
CSMD1-217ENST00000602723 SLC1A2P43004 574 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 TAF10Q12962 218 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 ANKFN1Q8N957 763 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 NDRG1Q92597 394 aaKnown RBP9.43□□□□□ -0.9
CSMD1-217ENST00000602723 TMEM109Q9BVC6 243 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 WDR37Q9Y2I8 494 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 FAM208AQ9UK61 1670 aaKnown RBP9.43□□□□□ -0.9
CSMD1-217ENST00000602723 TRPM6Q9BX84 2022 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 B3GALT2O43825 422 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 RENP00797 406 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 CYP11A1P05108 521 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 RYKP34925 604 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 NCBP2P52298 156 aaKnown RBP eCLIP9.43□□□□□ -0.9
CSMD1-217ENST00000602723 GBX2P52951 348 aaPredicted RBP9.43□□□□□ -0.9
CSMD1-217ENST00000602723 CRYBB1P53674 252 aaPredicted RBP9.43□□□□□ -0.9
CSMD1-217ENST00000602723 ATAD1Q8NBU5 361 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 GEMIN6Q8WXD5 167 aaKnown RBP9.43□□□□□ -0.9
CSMD1-217ENST00000602723 CDCA5Q96FF9 252 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 SLC35G5Q96KT7 338 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 CAMK1GQ96NX5 476 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 ABCG4Q9H172 646 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 XKR8Q9H6D3 395 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 MTMR10Q9NXD2 777 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 FLRT1Q9NZU1 646 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 PCDHGB7Q9Y5F8 929 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 RGS19P49795 217 aa9.43□□□□□ -0.9
CSMD1-217ENST00000602723 MAB21L1Q13394 359 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms