RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 TMED2Q15363 201 aa15.25■□□□□ 0.03
VRK3-221ENST00000600284 ZIC1Q15915 447 aa15.25■□□□□ 0.03
VRK3-221ENST00000600284 ZNF385CQ66K41 422 aaPredicted RBP15.25■□□□□ 0.03
VRK3-221ENST00000600284 PTRHD1Q6GMV3 140 aaKnown RBP15.25■□□□□ 0.03
VRK3-221ENST00000600284 RHBDD2Q6NTF9 364 aa15.25■□□□□ 0.03
VRK3-221ENST00000600284 VRK3Q8IV63 474 aa15.25■□□□□ 0.03
VRK3-221ENST00000600284 DCUN1D3Q8IWE4 304 aa15.25■□□□□ 0.03
VRK3-221ENST00000600284 TEX19Q8NA77 164 aa15.25■□□□□ 0.03
VRK3-221ENST00000600284 ING2Q9H160 280 aa15.25■□□□□ 0.03
VRK3-221ENST00000600284 P2RY12Q9H244 342 aa15.25■□□□□ 0.03
VRK3-221ENST00000600284 ACSS2Q9NR19 701 aa15.25■□□□□ 0.03
VRK3-221ENST00000600284 MARCH4Q9P2E8 410 aaPredicted RBP15.25■□□□□ 0.03
VRK3-221ENST00000600284 MRFAP1Q9Y605 127 aa15.25■□□□□ 0.03
VRK3-221ENST00000600284 FLNBO75369 2602 aaKnown RBP15.24■□□□□ 0.03
VRK3-221ENST00000600284 MYO18BQ8IUG5 2567 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 IQCF5A8MTL0 148 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 ISM1B1AKI9 464 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 C9J4A7 227 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 PFDN6O15212 129 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 NDUFS3O75489 264 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 OR2B3O76000 313 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 FKBP9O95302 570 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 CD9P21926 228 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 KCNJ1P48048 391 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 CSE1LP55060 971 aaKnown RBP15.24■□□□□ 0.03
VRK3-221ENST00000600284 SARNPP82979 210 aaKnown RBP15.24■□□□□ 0.03
VRK3-221ENST00000600284 FOXK1P85037 733 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 NCF4Q15080 339 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 MRNIPQ6NTE8 343 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 TLDC1Q6P9B6 456 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 TTC23LQ6PF05 361 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 FAM198BQ6UWH4 519 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 SDCCAG8Q86SQ7 713 aaPredicted RBP15.24■□□□□ 0.03
VRK3-221ENST00000600284 LDB1Q86U70 411 aaPredicted RBP15.24■□□□□ 0.03
VRK3-221ENST00000600284 TRIM73Q86UV7 250 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 DNAJC22Q8N4W6 341 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 GSDMBQ8TAX9 411 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 PROKR1Q8TCW9 393 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 LKAAEAR1Q8TD35 194 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 MENTQ9BUN1 341 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 TRIM55Q9BYV6 548 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 MLXIPLQ9NP71 852 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 SRPK3Q9UPE1 567 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 PLCL2Q9UPR0 1127 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 PADI2Q9Y2J8 665 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 PCDHGB7Q9Y5F8 929 aa15.24■□□□□ 0.03
VRK3-221ENST00000600284 SPTBP11277 2137 aa15.23■□□□□ 0.03
VRK3-221ENST00000600284 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.23■□□□□ 0.03
VRK3-221ENST00000600284 ARGFXA6NJG6 315 aa15.23■□□□□ 0.03
VRK3-221ENST00000600284 K7EM74 188 aa15.23■□□□□ 0.03
VRK3-221ENST00000600284 S1PR4O95977 384 aa15.23■□□□□ 0.03
VRK3-221ENST00000600284 NMBRP28336 390 aa15.23■□□□□ 0.03
VRK3-221ENST00000600284 PEBP1P30086 187 aaKnown RBP15.23■□□□□ 0.03
VRK3-221ENST00000600284 MAGEA6P43360 314 aa15.23■□□□□ 0.03
VRK3-221ENST00000600284 ADARP55265 1226 aaKnown RBP15.23■□□□□ 0.03
VRK3-221ENST00000600284 CRADDP78560 199 aa15.23■□□□□ 0.03
VRK3-221ENST00000600284 CCZ1BP86790 482 aa15.23■□□□□ 0.03
VRK3-221ENST00000600284 CCZ1P86791 482 aaPredicted RBP15.23■□□□□ 0.03
VRK3-221ENST00000600284 GRB7Q14451 532 aa15.23■□□□□ 0.03
VRK3-221ENST00000600284 PTCHD3Q3KNS1 767 aa15.23■□□□□ 0.03
VRK3-221ENST00000600284 RNF187Q5TA31 235 aaPredicted RBP15.23■□□□□ 0.03
VRK3-221ENST00000600284 PAPD7Q5XG87 772 aaKnown RBP15.23■□□□□ 0.03
VRK3-221ENST00000600284 MED25Q71SY5 747 aa15.23■□□□□ 0.03
VRK3-221ENST00000600284 KRT222Q8N1A0 295 aa15.23■□□□□ 0.03
VRK3-221ENST00000600284 PRELID2Q8N945 189 aa15.23■□□□□ 0.03
VRK3-221ENST00000600284 TMEM102Q8N9M5 508 aaPredicted RBP15.23■□□□□ 0.03
VRK3-221ENST00000600284 OR2L8Q8NGY9 312 aa15.23■□□□□ 0.03
VRK3-221ENST00000600284 DENND1AQ8TEH3 1009 aa15.23■□□□□ 0.03
VRK3-221ENST00000600284 IP6K3Q96PC2 410 aa15.23■□□□□ 0.03
VRK3-221ENST00000600284 TCF12Q99081 682 aa15.23■□□□□ 0.03
VRK3-221ENST00000600284 SLC25A23Q9BV35 468 aa15.23■□□□□ 0.03
VRK3-221ENST00000600284 RAB11FIP5Q9BXF6 653 aa15.23■□□□□ 0.03
VRK3-221ENST00000600284 SPRTNQ9H040 489 aaPredicted RBP15.23■□□□□ 0.03
VRK3-221ENST00000600284 PLAGL1Q9UM63 463 aa15.23■□□□□ 0.03
VRK3-221ENST00000600284 SOX13Q9UN79 622 aa15.23■□□□□ 0.03
VRK3-221ENST00000600284 PPP2R2CQ9Y2T4 447 aa15.23■□□□□ 0.03
VRK3-221ENST00000600284 SEC16AO15027 2179 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 H3BMM5 538 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 RASGRF2O14827 1237 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 ZSCAN9O15535 394 aaPredicted RBP15.22■□□□□ 0.03
VRK3-221ENST00000600284 CEACAM4O75871 244 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 DNAJB5O75953 348 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 TMEM63AO94886 807 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 VAPBO95292 243 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 NR1D1P20393 614 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 MGAT1P26572 445 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 ARNTP27540 789 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 CXCR5P32302 372 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 PTGIRP43119 386 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 CCL11P51671 97 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 RRADP55042 308 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 DCDP81605 110 aaKnown RBP15.22■□□□□ 0.03
VRK3-221ENST00000600284 SSPNQ14714 243 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 OTOAQ7RTW8 1153 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 RAB43Q86YS6 212 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 HPS6Q86YV9 775 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 RASGEF1CQ8N431 466 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 LINC01555Q8NAE3 123 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 CFAP61Q8NHU2 1237 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 MAGEC3Q8TD91 643 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms