RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 KCND3Q9UK17 655 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 CDYLQ9Y232 598 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 PCDHB3Q9Y5E6 796 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 KCNMB2Q9Y691 235 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 KRT87PA6NCN2 255 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 ATP8B1O43520 1251 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 VAPBO95292 243 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 CTSBP07858 339 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 F7P08709 466 aaPredicted RBP13.3□□□□□ -0.28
SCAF1-203ENST00000598359 CHRM5P08912 532 aaPredicted RBP13.3□□□□□ -0.28
SCAF1-203ENST00000598359 SFTPCP11686 197 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 NR1D1P20393 614 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 ARNTP27540 789 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 PEBP1P30086 187 aaKnown RBP13.3□□□□□ -0.28
SCAF1-203ENST00000598359 SHMT2P34897 504 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 NPY2RP49146 381 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 GPS1Q13098 491 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 PLEKHS1Q5SXH7 462 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 PTRHD1Q6GMV3 140 aaKnown RBP13.3□□□□□ -0.28
SCAF1-203ENST00000598359 WDR93Q6P2C0 686 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 C4orf22Q6V702 233 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 BPHLQ86WA6 291 aaPredicted RBP13.3□□□□□ -0.28
SCAF1-203ENST00000598359 SPNS2Q8IVW8 549 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 SLC22A15Q8IZD6 547 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 MPP5Q8N3R9 675 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 OTUD6BQ8N6M0 293 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 NOA1Q8NC60 698 aaKnown RBP13.3□□□□□ -0.28
SCAF1-203ENST00000598359 FLVCR1-AS1Q8TAF5 88 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 COG1Q8WTW3 980 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 CLIP3Q96DZ5 547 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 ABHD17AQ96GS6 310 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 SGSM3Q96HU1 749 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 IL17FQ96PD4 163 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 PARD6BQ9BYG5 372 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 IL22Q9GZX6 179 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 FANCEQ9HB96 536 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 IL1RAPL1Q9NZN1 696 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 ANAPC5Q9UJX4 755 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 RUVBL2Q9Y230 463 aaKnown RBP13.3□□□□□ -0.28
SCAF1-203ENST00000598359 KLHL20Q9Y2M5 609 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 PCDHGA6Q9Y5G7 932 aa13.3□□□□□ -0.28
SCAF1-203ENST00000598359 FLNCQ14315 2725 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 ISM1B1AKI9 464 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 C21orf140B9A014 251 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 K7EM74 188 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 MEN1O00255 615 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 PRMT5O14744 637 aaPredicted RBP13.29□□□□□ -0.28
SCAF1-203ENST00000598359 ZNF185O15231 689 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 SUV39H1O43463 412 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 GPC4O75487 556 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 KRT14P02533 472 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 TPSB2P20231 275 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 CYP2A7P20853 494 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 AOAHP28039 575 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 PTPN4P29074 926 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 TTPAP49638 278 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 EIF3BP55884 814 aaKnown RBP13.29□□□□□ -0.28
SCAF1-203ENST00000598359 IL10RAQ13651 578 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 KCNJ11Q14654 390 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 TPSAB1Q15661 275 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 PTCHD3Q3KNS1 767 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 CRTC2Q53ET0 693 aaPredicted RBP13.29□□□□□ -0.28
SCAF1-203ENST00000598359 AARS2Q5JTZ9 985 aaKnown RBP13.29□□□□□ -0.28
SCAF1-203ENST00000598359 LRRC8BQ6P9F7 803 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 TAX1BP1Q86VP1 789 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 HOOK3Q86VS8 718 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 DSELQ8IZU8 1212 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 C19orf47Q8N9M1 422 aaKnown RBP13.29□□□□□ -0.28
SCAF1-203ENST00000598359 OR8K5Q8NH50 307 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 C9orf43Q8TAL5 461 aaPredicted RBP13.29□□□□□ -0.28
SCAF1-203ENST00000598359 PEX13Q92968 403 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 MAGOHBQ96A72 148 aaKnown RBP13.29□□□□□ -0.28
SCAF1-203ENST00000598359 FAM136AQ96C01 138 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 P2RY12Q9H244 342 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 ACTR5Q9H9F9 607 aaPredicted RBP13.29□□□□□ -0.28
SCAF1-203ENST00000598359 LATS2Q9NRM7 1088 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 PCMTD2Q9NV79 361 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 FAM53CQ9NYF3 392 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 POLG2Q9UHN1 485 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 POLHQ9Y253 713 aa13.29□□□□□ -0.28
SCAF1-203ENST00000598359 GOLGA8MH3BSY2 632 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 ZNF749O43361 778 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 NDUFS3O75489 264 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 DNAJB5O75953 348 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 TMEM63AO94886 807 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 APOA4P06727 396 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 PKLRP30613 574 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 FMO4P31512 558 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 RORAP35398 523 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 PPARGP37231 505 aaPredicted RBP13.28□□□□□ -0.28
SCAF1-203ENST00000598359 ITGA1P56199 1179 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 RPS15P62841 145 aaKnown RBP13.28□□□□□ -0.28
SCAF1-203ENST00000598359 CHAF1BQ13112 559 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 GRB7Q14451 532 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 CTSL3PQ5NE16 218 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 CPZQ66K79 652 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 CAND1Q86VP6 1230 aaKnown RBP13.28□□□□□ -0.28
SCAF1-203ENST00000598359 RASGEF1CQ8N431 466 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 ENDOVQ8N8Q3 282 aaKnown RBP13.28□□□□□ -0.28
SCAF1-203ENST00000598359 LINC01555Q8NAE3 123 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms