RNA–Protein interactions for RNA: ENST00000598355.1

TRIM28-213, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-213ENST00000598355 ST6GAL1P15907 406 aa15.61■□□□□ 0.09
TRIM28-213ENST00000598355 UGT2B7P16662 529 aa15.61■□□□□ 0.09
TRIM28-213ENST00000598355 ZNF28P17035 718 aa15.61■□□□□ 0.09
TRIM28-213ENST00000598355 CDH3P22223 829 aa15.61■□□□□ 0.09
TRIM28-213ENST00000598355 TUBB4BP68371 445 aa15.61■□□□□ 0.09
TRIM28-213ENST00000598355 TIAL1Q01085 375 aaKnown RBP eCLIP15.61■□□□□ 0.09
TRIM28-213ENST00000598355 FOXM1Q08050 763 aa15.61■□□□□ 0.09
TRIM28-213ENST00000598355 TUBB2AQ13885 445 aa15.61■□□□□ 0.09
TRIM28-213ENST00000598355 KCNAB1Q14722 419 aa15.61■□□□□ 0.09
TRIM28-213ENST00000598355 KIR2DS3Q14952 304 aa15.61■□□□□ 0.09
TRIM28-213ENST00000598355 FASTKD3Q14CZ7 662 aaKnown RBP15.61■□□□□ 0.09
TRIM28-213ENST00000598355 ACSBG2Q5FVE4 666 aa15.61■□□□□ 0.09
TRIM28-213ENST00000598355 FBXO38Q6PIJ6 1188 aa15.61■□□□□ 0.09
TRIM28-213ENST00000598355 CNSTQ6PJW8 725 aa15.61■□□□□ 0.09
TRIM28-213ENST00000598355 PPP1R3BQ86XI6 285 aa15.61■□□□□ 0.09
TRIM28-213ENST00000598355 OR8K5Q8NH50 307 aa15.61■□□□□ 0.09
TRIM28-213ENST00000598355 CD200R1Q8TD46 325 aa15.61■□□□□ 0.09
TRIM28-213ENST00000598355 ZNF501Q96CX3 271 aaPredicted RBP15.61■□□□□ 0.09
TRIM28-213ENST00000598355 TRAPPC9Q96Q05 1148 aa15.61■□□□□ 0.09
TRIM28-213ENST00000598355 TUBB2BQ9BVA1 445 aa15.61■□□□□ 0.09
TRIM28-213ENST00000598355 RAB11FIP5Q9BXF6 653 aa15.61■□□□□ 0.09
TRIM28-213ENST00000598355 FGF21Q9NSA1 209 aa15.61■□□□□ 0.09
TRIM28-213ENST00000598355 IARS2Q9NSE4 1012 aaKnown RBP15.61■□□□□ 0.09
TRIM28-213ENST00000598355 SPHK1Q9NYA1 384 aa15.61■□□□□ 0.09
TRIM28-213ENST00000598355 ZC3H7BQ9UGR2 993 aaKnown RBP15.61■□□□□ 0.09
TRIM28-213ENST00000598355 PLAGL1Q9UM63 463 aa15.61■□□□□ 0.09
TRIM28-213ENST00000598355 RUVBL2Q9Y230 463 aaKnown RBP15.61■□□□□ 0.09
TRIM28-213ENST00000598355 MDC1Q14676 2089 aaKnown RBP15.6■□□□□ 0.09
TRIM28-213ENST00000598355 TEX51A0A1B0GUA7 166 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 SLC9B1P1A6NJY1 282 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 E5RI56 91 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 EIF3FO00303 357 aaPredicted RBP15.6■□□□□ 0.09
TRIM28-213ENST00000598355 RASGRF2O14827 1237 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 PSIP1O75475 530 aaKnown RBP15.6■□□□□ 0.09
TRIM28-213ENST00000598355 HAUS5O94927 633 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 TIAF1O95411 115 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 WT1P19544 449 aaPredicted RBP15.6■□□□□ 0.09
TRIM28-213ENST00000598355 CD9P21926 228 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 CCNFP41002 786 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 GABRA4P48169 554 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 ATP1A2P50993 1020 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 CXADRP78310 365 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 MRPS25P82663 173 aaKnown RBP15.6■□□□□ 0.09
TRIM28-213ENST00000598355 CKAP4Q07065 602 aaKnown RBP15.6■□□□□ 0.09
TRIM28-213ENST00000598355 ABRQ12979 859 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 SLC5A12Q1EHB4 618 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 TEDDM1Q5T9Z0 273 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 TRMT10BQ6PF06 316 aaKnown RBP15.6■□□□□ 0.09
TRIM28-213ENST00000598355 GPR155Q7Z3F1 870 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 CACNA2D3Q8IZS8 1091 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 NLGN4XQ8N0W4 816 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 NLGN4YQ8NFZ3 816 aaPredicted RBP15.6■□□□□ 0.09
TRIM28-213ENST00000598355 OR2L8Q8NGY9 312 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 GABPB2Q8TAK5 448 aaPredicted RBP15.6■□□□□ 0.09
TRIM28-213ENST00000598355 DENND1AQ8TEH3 1009 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 RAD51AP1Q96B01 352 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 SYTL2Q9HCH5 934 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 PDE7BQ9NP56 450 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 RARRES3Q9UL19 164 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 TDRKHQ9Y2W6 561 aaKnown RBP15.6■□□□□ 0.09
TRIM28-213ENST00000598355 DHRS7Q9Y394 339 aa15.6■□□□□ 0.09
TRIM28-213ENST00000598355 SMG1Q96Q15 3661 aaKnown RBP15.6■□□□□ 0.09
TRIM28-213ENST00000598355 A0A0J9YY10 115 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 ARHGEF33A8MVX0 844 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 TERTO14746 1132 aaKnown RBP15.59■□□□□ 0.09
TRIM28-213ENST00000598355 EIF3HO15372 352 aaKnown RBP eCLIP15.59■□□□□ 0.09
TRIM28-213ENST00000598355 PRICKLE3O43900 615 aaPredicted RBP15.59■□□□□ 0.09
TRIM28-213ENST00000598355 SPAG6O75602 509 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 ENO3P13929 434 aaPredicted RBP15.59■□□□□ 0.09
TRIM28-213ENST00000598355 CHRM3P20309 590 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 MAP4P27816 1152 aaKnown RBP15.59■□□□□ 0.09
TRIM28-213ENST00000598355 STAT5AP42229 794 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 BDKRB1P46663 353 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 ABHD18Q0P651 414 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 PDIA2Q13087 525 aaKnown RBP15.59■□□□□ 0.09
TRIM28-213ENST00000598355 KLHL38Q2WGJ6 581 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 TTLL9Q3SXZ7 439 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 CCSMST1Q4G0I0 132 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.59■□□□□ 0.09
TRIM28-213ENST00000598355 MANEAQ5SRI9 462 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 KIAA1614Q5VZ46 1190 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 CCDC81Q6ZN84 652 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 VASH2Q86V25 355 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 C19orf47Q8N9M1 422 aaKnown RBP15.59■□□□□ 0.09
TRIM28-213ENST00000598355 FBXO15Q8NCQ5 510 aaPredicted RBP15.59■□□□□ 0.09
TRIM28-213ENST00000598355 GSDMBQ8TAX9 411 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 SEC14L1Q92503 715 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 FAM136AQ96C01 138 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 GPR21Q99679 349 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 ULBP3Q9BZM4 244 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 CCDC68Q9H2F9 335 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 MOCS1Q9NZB8 636 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 SPATA7Q9P0W8 599 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 SLC17A6Q9P2U8 582 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 CORO1CQ9ULV4 474 aaPredicted RBP15.59■□□□□ 0.09
TRIM28-213ENST00000598355 PCDHGA4Q9Y5G9 962 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 ATRXP46100 2492 aa15.59■□□□□ 0.09
TRIM28-213ENST00000598355 H3BMH7 237 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 MYO1CO00159 1063 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 FKBP9O95302 570 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms