RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 MT-CYBP00156 380 aaPredicted RBP12.55□□□□□ -0.4
SCAF1-202ENST00000595242 CEACAM5P06731 702 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 MMP2P08253 660 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 MYCLP1P12525 358 aaPredicted RBP12.55□□□□□ -0.4
SCAF1-202ENST00000595242 CTBSQ01459 385 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 SLC10A7Q0GE19 358 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 BMPR2Q13873 1038 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 INSCQ1MX18 579 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 ZRANB3Q5FWF4 1079 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 TEDDM1Q5T9Z0 273 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 KCNMB4Q86W47 210 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 PELI3Q8N2H9 469 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 IPMKQ8NFU5 416 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 ARRDC2Q8TBH0 407 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 CCT6BQ92526 530 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 ZNF75CPQ92670 426 aaPredicted RBP12.55□□□□□ -0.4
SCAF1-202ENST00000595242 C19orf60Q96EN9 201 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 EXOC2Q96KP1 924 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 APOL2Q9BQE5 337 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 UBP1Q9NZI7 540 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 ENTPD4Q9Y227 616 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 ARL2BPQ9Y2Y0 163 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 TCAF1Q9Y4C2 921 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 PSAT1Q9Y617 370 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 PKDREJQ9NTG1 2253 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 PIKFYVEQ9Y2I7 2098 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 TRBV23OR9-2A0A075B6M9 112 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 BIRC5O15392 142 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 GLRA3O75311 464 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 ALDOAP04075 364 aaKnown RBP12.54□□□□□ -0.4
SCAF1-202ENST00000595242 ERVK-10P10266 1014 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 SPRP35270 261 aaPredicted RBP12.54□□□□□ -0.4
SCAF1-202ENST00000595242 HADHAP40939 763 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 FASLGP48023 281 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 WNT3AP56704 352 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 FOXM1Q08050 763 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 RALGDSQ12967 914 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 CHAF1BQ13112 559 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 MSLNQ13421 630 aaPredicted RBP12.54□□□□□ -0.4
SCAF1-202ENST00000595242 RFTN1Q14699 578 aaPredicted RBP12.54□□□□□ -0.4
SCAF1-202ENST00000595242 LBRQ14739 615 aaKnown RBP12.54□□□□□ -0.4
SCAF1-202ENST00000595242 SEPT7Q16181 437 aaKnown RBP12.54□□□□□ -0.4
SCAF1-202ENST00000595242 KIAA0930Q6ICG6 404 aaPredicted RBP12.54□□□□□ -0.4
SCAF1-202ENST00000595242 LIPIQ6XZB0 460 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 CDHR3Q6ZTQ4 885 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 ZSWIM9Q86XI8 627 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 ZNF354CQ86Y25 554 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 TRIM42Q8IWZ5 723 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 MCEMP1Q8IX19 187 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 PPHLN1Q8NEY8 458 aaKnown RBP12.54□□□□□ -0.4
SCAF1-202ENST00000595242 ZNF398Q8TD17 642 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 NCSTNQ92542 709 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 MFSD3Q96ES6 412 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 FAM111AQ96PZ2 611 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 MFRPQ9BY79 579 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 NT5MQ9NPB1 228 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 TREX1Q9NSU2 369 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 HAUS2Q9NVX0 235 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 KLHL3Q9UH77 587 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 PHTF1Q9UMS5 762 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 SUFUQ9UMX1 484 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 PCDHGA6Q9Y5G7 932 aa12.54□□□□□ -0.4
SCAF1-202ENST00000595242 LOC285095A0A1B0GVY8 99 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 CCT8L1PA6NM43 557 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 GSTA1P08263 222 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 ELFN1P0C7U0 828 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 CCNYL3P0C7X3 344 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 GM2AP17900 193 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 NMBRP28336 390 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 SERPINB4P48594 390 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 SERPINB8P50452 374 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 CCL11P51671 97 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 IFT88Q13099 833 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 GRM3Q14832 879 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 ZKSCAN8Q15776 578 aaPredicted RBP12.53□□□□□ -0.4
SCAF1-202ENST00000595242 ZXDCQ2QGD7 858 aaPredicted RBP12.53□□□□□ -0.4
SCAF1-202ENST00000595242 INO80DQ53TQ3 878 aaPredicted RBP12.53□□□□□ -0.4
SCAF1-202ENST00000595242 MROH9Q5TGP6 573 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 CPZQ66K79 652 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 BRAT1Q6PJG6 821 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 CES3Q6UWW8 571 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 NDUFAF2Q8N183 169 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 PGBD5Q8N414 524 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 PEX13Q92968 403 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 ZNF641Q96N77 438 aaPredicted RBP12.53□□□□□ -0.4
SCAF1-202ENST00000595242 PAIP2Q9BPZ3 127 aaKnown RBP12.53□□□□□ -0.4
SCAF1-202ENST00000595242 FSD1LQ9BXM9 530 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 PITPNM3Q9BZ71 974 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 POLR1EQ9GZS1 481 aaKnown RBP12.53□□□□□ -0.4
SCAF1-202ENST00000595242 IQCGQ9H095 443 aaKnown RBP12.53□□□□□ -0.4
SCAF1-202ENST00000595242 ACTR5Q9H9F9 607 aaPredicted RBP12.53□□□□□ -0.4
SCAF1-202ENST00000595242 ACSS2Q9NR19 701 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 CHRAC1Q9NRG0 131 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 PHPT1Q9NRX4 125 aaPredicted RBP12.53□□□□□ -0.4
SCAF1-202ENST00000595242 PCMTD2Q9NV79 361 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 SIDT1Q9NXL6 827 aaKnown RBP12.53□□□□□ -0.4
SCAF1-202ENST00000595242 TXNDC16Q9P2K2 825 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 SLC17A6Q9P2U8 582 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 ZNF451Q9Y4E5 1061 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 PLEKHM1Q9Y4G2 1056 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms