RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 OR52B2Q96RD2 323 aa25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 MYLK2Q9H1R3 596 aa25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 WDR55Q9H6Y2 383 aaPredicted RBP25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 MEAF6Q9HAF1 191 aa25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 STK38LQ9Y2H1 464 aa25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 ANGPTL3Q9Y5C1 460 aa25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 SPTY2D1-AS1A0A0U1RR47 76 aa25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 SDHDO14521 159 aa25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 WDR47O94967 919 aa25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 OR4F21O95013 312 aa25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 BCKDHBP21953 392 aa25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 IDSP22304 550 aa25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 EPHA3P29320 983 aa25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 CTBSQ01459 385 aa25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 RD3Q7Z3Z2 195 aa25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 DCUN1D3Q8IWE4 304 aa25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 OR4F6Q8NGB9 312 aa25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 OR56A3Q8NH54 315 aa25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 ZNF480Q8WV37 535 aa25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 PPP1R36Q96LQ0 422 aa25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 INSM2Q96T92 566 aaPredicted RBP25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 NTMT1Q9BV86 223 aa25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 CFAP20Q9Y6A4 193 aaKnown RBP25.31■■□□□ 1.64
SCAMP4-210ENST00000588555 CCNG1P51959 295 aa25.3■■□□□ 1.64
SCAMP4-210ENST00000588555 PTK2BQ14289 1009 aa25.3■■□□□ 1.64
SCAMP4-210ENST00000588555 SLC36A4Q6YBV0 504 aa25.3■■□□□ 1.64
SCAMP4-210ENST00000588555 MAGEC3Q8TD91 643 aa25.3■■□□□ 1.64
SCAMP4-210ENST00000588555 ERP27Q96DN0 273 aa25.3■■□□□ 1.64
SCAMP4-210ENST00000588555 PRR11Q96HE9 360 aaPredicted RBP25.3■■□□□ 1.64
SCAMP4-210ENST00000588555 NMUR2Q9GZQ4 415 aa25.3■■□□□ 1.64
SCAMP4-210ENST00000588555 TMEM168Q9H0V1 697 aa25.3■■□□□ 1.64
SCAMP4-210ENST00000588555 TCF7L2Q9NQB0 619 aa25.3■■□□□ 1.64
SCAMP4-210ENST00000588555 INTS7Q9NVH2 962 aaKnown RBP25.3■■□□□ 1.64
SCAMP4-210ENST00000588555 SPATA6Q9NWH7 488 aaPredicted RBP25.3■■□□□ 1.64
SCAMP4-210ENST00000588555 SLC22A14Q9Y267 594 aa25.3■■□□□ 1.64
SCAMP4-210ENST00000588555 A0A0C4DFX4 3053 aa25.29■■□□□ 1.64
SCAMP4-210ENST00000588555 GOLGA8QA0A0J9YX86 632 aa25.29■■□□□ 1.64
SCAMP4-210ENST00000588555 GOLGA8OA6NCC3 632 aa25.29■■□□□ 1.64
SCAMP4-210ENST00000588555 GOLGA8NF8WBI6 632 aa25.29■■□□□ 1.64
SCAMP4-210ENST00000588555 GIPC1O14908 333 aa25.29■■□□□ 1.64
SCAMP4-210ENST00000588555 UROSP10746 265 aa25.29■■□□□ 1.64
SCAMP4-210ENST00000588555 EIF2B5Q13144 721 aaKnown RBP25.29■■□□□ 1.64
SCAMP4-210ENST00000588555 FZD2Q14332 565 aa25.29■■□□□ 1.64
SCAMP4-210ENST00000588555 CLCA4Q14CN2 919 aa25.29■■□□□ 1.64
SCAMP4-210ENST00000588555 UAP1L1Q3KQV9 507 aa25.29■■□□□ 1.64
SCAMP4-210ENST00000588555 TWIST2Q8WVJ9 160 aa25.29■■□□□ 1.64
SCAMP4-210ENST00000588555 RAD51AP1Q96B01 352 aa25.29■■□□□ 1.64
SCAMP4-210ENST00000588555 PRDM8Q9NQV8 689 aa25.29■■□□□ 1.64
SCAMP4-210ENST00000588555 PRMT8Q9NR22 394 aaPredicted RBP25.29■■□□□ 1.64
SCAMP4-210ENST00000588555 AASDHPPTQ9NRN7 309 aa25.29■■□□□ 1.64
SCAMP4-210ENST00000588555 DNAJC11Q9NVH1 559 aa25.29■■□□□ 1.64
SCAMP4-210ENST00000588555 TRNAU1APQ9NX07 287 aaKnown RBP25.29■■□□□ 1.64
SCAMP4-210ENST00000588555 TIMM22Q9Y584 194 aa25.29■■□□□ 1.64
SCAMP4-210ENST00000588555 GON4LQ3T8J9 2241 aa25.29■■□□□ 1.64
SCAMP4-210ENST00000588555 CEP192Q8TEP8 1941 aa25.29■■□□□ 1.64
SCAMP4-210ENST00000588555 ABCA7Q8IZY2 2146 aa25.29■■□□□ 1.64
SCAMP4-210ENST00000588555 CCDC163A0A0D9SF12 145 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 KATNA1O75449 491 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 RPN2P04844 631 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 TDGF1P13385 188 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 ITPKAP23677 461 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 AK4P27144 223 aaPredicted RBP25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 NAE1Q13564 534 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 TSSK4Q6SA08 328 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 YTHDF3Q7Z739 585 aaKnown RBP25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 CLNKQ7Z7G1 428 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 HID1Q8IV36 788 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 LRRC56Q8IYG6 542 aaPredicted RBP25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 CCL4L1Q8NHW4 92 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 ATP6V1E2Q96A05 226 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 KLHDC7BQ96G42 594 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 C12orf66Q96MD2 445 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 NUSAP1Q9BXS6 441 aaKnown RBP25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 TUBB1Q9H4B7 451 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 A0A1W2PR77 199 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 FCHO1O14526 889 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 DCXO43602 365 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 LSM12Q3MHD2 195 aaKnown RBP25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 GALNTL6Q49A17 601 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 DUS1LQ6P1R4 473 aaKnown RBP25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 TBC1D21Q8IYX1 336 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 CDYL2Q8N8U2 506 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 PPFIBP2Q8ND30 876 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 HSPA12BQ96MM6 686 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 CAAP1Q9H8G2 361 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 TBC1D29Q9UFV1 150 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 KLF15Q9UIH9 416 aa25.28■■□□□ 1.64
SCAMP4-210ENST00000588555 ATXN2Q99700 1313 aaKnown RBP25.27■■□□□ 1.64
SCAMP4-210ENST00000588555 UBOX5O94941 541 aa25.27■■□□□ 1.64
SCAMP4-210ENST00000588555 RASGRP1O95267 797 aa25.27■■□□□ 1.64
SCAMP4-210ENST00000588555 WNT1P04628 370 aa25.27■■□□□ 1.64
SCAMP4-210ENST00000588555 SERPINA6P08185 405 aa25.27■■□□□ 1.64
SCAMP4-210ENST00000588555 EBLN1P0CF75 366 aa25.27■■□□□ 1.64
SCAMP4-210ENST00000588555 MAOBP27338 520 aa25.27■■□□□ 1.64
SCAMP4-210ENST00000588555 WASH2PQ6VEQ5 465 aa25.27■■□□□ 1.64
SCAMP4-210ENST00000588555 MILR1Q7Z6M3 343 aa25.27■■□□□ 1.64
SCAMP4-210ENST00000588555 THOC6Q86W42 341 aaKnown RBP25.27■■□□□ 1.64
SCAMP4-210ENST00000588555 NRROSQ86YC3 692 aa25.27■■□□□ 1.64
SCAMP4-210ENST00000588555 MFSD2AQ8NA29 543 aa25.27■■□□□ 1.64
SCAMP4-210ENST00000588555 C1orf216Q8TAB5 229 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms