RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 NCF4Q15080 339 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 KYNUQ16719 465 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 ZNF385CQ66K41 422 aaPredicted RBP11.14□□□□□ -0.63
SSH2-208ENST00000579040 LCN10Q6JVE6 187 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 RHBDD2Q6NTF9 364 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 NAPRTQ6XQN6 538 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 GSTA5Q7RTV2 222 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 TRIM73Q86UV7 250 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 LRRC6Q86X45 466 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 DCUN1D3Q8IWE4 304 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 TEX19Q8NA77 164 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 PROKR1Q8TCW9 393 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 SLC22A18Q96BI1 424 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 PANX3Q96QZ0 392 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 TRIM55Q9BYV6 548 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 ING2Q9H160 280 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 MRM3Q9HC36 420 aaKnown RBP11.14□□□□□ -0.63
SSH2-208ENST00000579040 FAM60AQ9NP50 221 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 LZTFL1Q9NQ48 299 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 ACSS2Q9NR19 701 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 CHRAC1Q9NRG0 131 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 SPHK1Q9NYA1 384 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 SRPK3Q9UPE1 567 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 CDYLQ9Y232 598 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 PCDHGB7Q9Y5F8 929 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 HECTD1Q9ULT8 2610 aa11.14□□□□□ -0.63
SSH2-208ENST00000579040 ISM1B1AKI9 464 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 H3BMH7 237 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 K7EM74 188 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 NRDCO43847 1150 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 DNAJB5O75953 348 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 FKBP9O95302 570 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 S1PR4O95977 384 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 CD63P08962 238 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 TPSB2P20231 275 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 NR1D1P20393 614 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 RPS3P23396 243 aaKnown RBP eCLIP11.13□□□□□ -0.63
SSH2-208ENST00000579040 PTGIRP43119 386 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 PGDP52209 483 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 RRADP55042 308 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 CSE1LP55060 971 aaKnown RBP11.13□□□□□ -0.63
SSH2-208ENST00000579040 SESN2P58004 480 aaPredicted RBP11.13□□□□□ -0.63
SSH2-208ENST00000579040 TPSAB1Q15661 275 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 ZIC1Q15915 447 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 PTCHD3Q3KNS1 767 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 PAPD7Q5XG87 772 aaKnown RBP11.13□□□□□ -0.63
SSH2-208ENST00000579040 CPZQ66K79 652 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 PTRHD1Q6GMV3 140 aaKnown RBP11.13□□□□□ -0.63
SSH2-208ENST00000579040 TLDC1Q6P9B6 456 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 RAB43Q86YS6 212 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 VRK3Q8IV63 474 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 TMEM102Q8N9M5 508 aaPredicted RBP11.13□□□□□ -0.63
SSH2-208ENST00000579040 GSDMBQ8TAX9 411 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 LKAAEAR1Q8TD35 194 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 IP6K3Q96PC2 410 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 SLC25A23Q9BV35 468 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 KIFC1Q9BW19 673 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 RAB11FIP5Q9BXF6 653 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 P2RY12Q9H244 342 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 MLXIPLQ9NP71 852 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 MARCH4Q9P2E8 410 aaPredicted RBP11.13□□□□□ -0.63
SSH2-208ENST00000579040 GNPTGQ9UJJ9 305 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 PLAGL1Q9UM63 463 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 G3BP2Q9UN86 482 aaKnown RBP11.13□□□□□ -0.63
SSH2-208ENST00000579040 PLCL2Q9UPR0 1127 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 MRFAP1Q9Y605 127 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 LRRK2Q5S007 2527 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 HEATR5BQ9P2D3 2071 aa11.13□□□□□ -0.63
SSH2-208ENST00000579040 ARGFXA6NJG6 315 aa11.12□□□□□ -0.63
SSH2-208ENST00000579040 PFDN6O15212 129 aa11.12□□□□□ -0.63
SSH2-208ENST00000579040 ZSCAN9O15535 394 aaPredicted RBP11.12□□□□□ -0.63
SSH2-208ENST00000579040 CEP104O60308 925 aa11.12□□□□□ -0.63
SSH2-208ENST00000579040 NDUFS3O75489 264 aa11.12□□□□□ -0.63
SSH2-208ENST00000579040 CEACAM4O75871 244 aa11.12□□□□□ -0.63
SSH2-208ENST00000579040 TMEM63AO94886 807 aa11.12□□□□□ -0.63
SSH2-208ENST00000579040 CD9P21926 228 aa11.12□□□□□ -0.63
SSH2-208ENST00000579040 PEBP1P30086 187 aaKnown RBP11.12□□□□□ -0.63
SSH2-208ENST00000579040 CRADDP78560 199 aa11.12□□□□□ -0.63
SSH2-208ENST00000579040 DEFB110Q30KQ9 67 aa11.12□□□□□ -0.63
SSH2-208ENST00000579040 RNF187Q5TA31 235 aaPredicted RBP11.12□□□□□ -0.63
SSH2-208ENST00000579040 MRNIPQ6NTE8 343 aa11.12□□□□□ -0.63
SSH2-208ENST00000579040 LRRC8BQ6P9F7 803 aa11.12□□□□□ -0.63
SSH2-208ENST00000579040 TTC23LQ6PF05 361 aa11.12□□□□□ -0.63
SSH2-208ENST00000579040 MED25Q71SY5 747 aa11.12□□□□□ -0.63
SSH2-208ENST00000579040 HPS6Q86YV9 775 aa11.12□□□□□ -0.63
SSH2-208ENST00000579040 LRRC8AQ8IWT6 810 aa11.12□□□□□ -0.63
SSH2-208ENST00000579040 DNAJC22Q8N4W6 341 aa11.12□□□□□ -0.63
SSH2-208ENST00000579040 OR2L8Q8NGY9 312 aa11.12□□□□□ -0.63
SSH2-208ENST00000579040 GBP5Q96PP8 586 aa11.12□□□□□ -0.63
SSH2-208ENST00000579040 TCF12Q99081 682 aa11.12□□□□□ -0.63
SSH2-208ENST00000579040 MENTQ9BUN1 341 aa11.12□□□□□ -0.63
SSH2-208ENST00000579040 TXLNGQ9NUQ3 528 aa11.12□□□□□ -0.63
SSH2-208ENST00000579040 INTS7Q9NVH2 962 aaKnown RBP11.12□□□□□ -0.63
SSH2-208ENST00000579040 SHANK1Q9Y566 2161 aa11.11□□□□□ -0.63
SSH2-208ENST00000579040 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.11□□□□□ -0.63
SSH2-208ENST00000579040 IQCF5A8MTL0 148 aa11.11□□□□□ -0.63
SSH2-208ENST00000579040 H3BMM5 538 aa11.11□□□□□ -0.63
SSH2-208ENST00000579040 RASGRF2O14827 1237 aa11.11□□□□□ -0.63
SSH2-208ENST00000579040 IGHEP01854 428 aa11.11□□□□□ -0.63
SSH2-208ENST00000579040 PDGFAP04085 211 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms