RNA–Protein interactions for RNA: ENST00000578397.5

PSMD11-207, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 1,178 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-207ENST00000578397 ZNF749O43361 778 aa13.46□□□□□ -0.25
PSMD11-207ENST00000578397 APOA4P06727 396 aa13.46□□□□□ -0.25
PSMD11-207ENST00000578397 CAPN1P07384 714 aa13.46□□□□□ -0.25
PSMD11-207ENST00000578397 AGXTP21549 392 aa13.46□□□□□ -0.25
PSMD11-207ENST00000578397 SESN2P58004 480 aaPredicted RBP13.46□□□□□ -0.25
PSMD11-207ENST00000578397 BASP1P80723 227 aaKnown RBP13.46□□□□□ -0.25
PSMD11-207ENST00000578397 SEMA3AQ14563 771 aa13.46□□□□□ -0.25
PSMD11-207ENST00000578397 KYNUQ16719 465 aa13.46□□□□□ -0.25
PSMD11-207ENST00000578397 LCN10Q6JVE6 187 aa13.46□□□□□ -0.25
PSMD11-207ENST00000578397 UNC5DQ6UXZ4 953 aa13.46□□□□□ -0.25
PSMD11-207ENST00000578397 ASB18Q6ZVZ8 466 aa13.46□□□□□ -0.25
PSMD11-207ENST00000578397 GSTA5Q7RTV2 222 aa13.46□□□□□ -0.25
PSMD11-207ENST00000578397 TRIM73Q86UV7 250 aa13.46□□□□□ -0.25
PSMD11-207ENST00000578397 ENDOVQ8N8Q3 282 aaKnown RBP13.46□□□□□ -0.25
PSMD11-207ENST00000578397 FLVCR1-AS1Q8TAF5 88 aa13.46□□□□□ -0.25
PSMD11-207ENST00000578397 ADAMTS17Q8TE56 1095 aa13.46□□□□□ -0.25
PSMD11-207ENST00000578397 DHRS4Q9BTZ2 278 aa13.46□□□□□ -0.25
PSMD11-207ENST00000578397 FAM60AQ9NP50 221 aa13.46□□□□□ -0.25
PSMD11-207ENST00000578397 TREX1Q9NSU2 369 aa13.46□□□□□ -0.25
PSMD11-207ENST00000578397 SPHK1Q9NYA1 384 aa13.46□□□□□ -0.25
PSMD11-207ENST00000578397 BFARQ9NZS9 450 aa13.46□□□□□ -0.25
PSMD11-207ENST00000578397 TCFL5Q9UL49 500 aa13.46□□□□□ -0.25
PSMD11-207ENST00000578397 CDYLQ9Y232 598 aa13.46□□□□□ -0.25
PSMD11-207ENST00000578397 PCDHGA9Q9Y5G4 932 aaKnown RBP13.46□□□□□ -0.25
PSMD11-207ENST00000578397 SPTBP11277 2137 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 ISM1B1AKI9 464 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 C9J4A7 227 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 KPNA5O15131 536 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 OR2B3O76000 313 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 SLCO2B1O94956 709 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 AOAHP28039 575 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 PKLRP30613 574 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 GABRA4P48169 554 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 RAB28P51157 221 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 CSE1LP55060 971 aaKnown RBP13.45□□□□□ -0.26
PSMD11-207ENST00000578397 TMED2Q15363 201 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 ZIC1Q15915 447 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 PTCHD3Q3KNS1 767 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 ARMC3Q5W041 872 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 PTRHD1Q6GMV3 140 aaKnown RBP13.45□□□□□ -0.26
PSMD11-207ENST00000578397 RHBDD2Q6NTF9 364 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 FAM198BQ6UWH4 519 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 LRRC6Q86X45 466 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 DCUN1D3Q8IWE4 304 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 LRRC8AQ8IWT6 810 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 SLC22A18Q96BI1 424 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 PANX3Q96QZ0 392 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 ING2Q9H160 280 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 MRM3Q9HC36 420 aaKnown RBP13.45□□□□□ -0.26
PSMD11-207ENST00000578397 ACSS2Q9NR19 701 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 MARCH4Q9P2E8 410 aaPredicted RBP13.45□□□□□ -0.26
PSMD11-207ENST00000578397 PADI2Q9Y2J8 665 aa13.45□□□□□ -0.26
PSMD11-207ENST00000578397 UBR5O95071 2799 aaPredicted RBP13.45□□□□□ -0.26
PSMD11-207ENST00000578397 ARGFXA6NJG6 315 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 IQCF5A8MTL0 148 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 H3BMH7 237 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 K7EM74 188 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 NRDCO43847 1150 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 CEP104O60308 925 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 NDUFS3O75489 264 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 DNAJB5O75953 348 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 CD63P08962 238 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 TPSB2P20231 275 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 NR1D1P20393 614 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 CD9P21926 228 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 RPS3P23396 243 aaKnown RBP eCLIP13.44□□□□□ -0.262e-9■□□□□ 8.6
PSMD11-207ENST00000578397 KCNJ1P48048 391 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 NCF4Q15080 339 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 TPSAB1Q15661 275 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 ZNF385CQ66K41 422 aaPredicted RBP13.44□□□□□ -0.26
PSMD11-207ENST00000578397 TLDC1Q6P9B6 456 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 LRRC8BQ6P9F7 803 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 TTC23LQ6PF05 361 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 LDB1Q86U70 411 aaPredicted RBP13.44□□□□□ -0.26
PSMD11-207ENST00000578397 VRK3Q8IV63 474 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 DNAJC22Q8N4W6 341 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 GSDMBQ8TAX9 411 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 PROKR1Q8TCW9 393 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 LKAAEAR1Q8TD35 194 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 SLC25A23Q9BV35 468 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 KIFC1Q9BW19 673 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 TRIM55Q9BYV6 548 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 P2RY12Q9H244 342 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 MLXIPLQ9NP71 852 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 GNPTGQ9UJJ9 305 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 PLAGL1Q9UM63 463 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 SRPK3Q9UPE1 567 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 PLCL2Q9UPR0 1127 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 PCDHGB7Q9Y5F8 929 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 MRFAP1Q9Y605 127 aa13.44□□□□□ -0.26
PSMD11-207ENST00000578397 PFDN6O15212 129 aa13.43□□□□□ -0.26
PSMD11-207ENST00000578397 ZSCAN9O15535 394 aaPredicted RBP13.43□□□□□ -0.26
PSMD11-207ENST00000578397 TMEM63AO94886 807 aa13.43□□□□□ -0.26
PSMD11-207ENST00000578397 FKBP9O95302 570 aa13.43□□□□□ -0.26
PSMD11-207ENST00000578397 S1PR4O95977 384 aa13.43□□□□□ -0.26
PSMD11-207ENST00000578397 NMBRP28336 390 aa13.43□□□□□ -0.26
PSMD11-207ENST00000578397 PEBP1P30086 187 aaKnown RBP13.43□□□□□ -0.26
PSMD11-207ENST00000578397 PTGIRP43119 386 aa13.43□□□□□ -0.26
PSMD11-207ENST00000578397 CCL11P51671 97 aa13.43□□□□□ -0.26
PSMD11-207ENST00000578397 PGDP52209 483 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms