RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 CCDC170Q8IYT3 715 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 OR5AR1Q8NGP9 310 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 OR5K2Q8NHB8 316 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 CCDC110Q8TBZ0 833 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 PPP4R1Q8TF05 950 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 UBE2Q2Q8WVN8 375 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 C19orf60Q96EN9 201 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 OR2A14Q96R47 310 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 GORASP1Q9BQQ3 440 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 ZNF552Q9H707 407 aaPredicted RBP13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 RUBCNLQ9H714 662 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 DHCR7Q9UBM7 475 aaKnown RBP13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 CDC23Q9UJX2 597 aa13.7□□□□□ -0.22
SMARCD2-205ENST00000577686 NOTCH2Q04721 2471 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 A0A1B0GX78 115 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 ALBP02768 609 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 ATXN8OSP0DMR3 200 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 MSNP26038 577 aaKnown RBP13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 DCTP40126 519 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 DBN1Q16643 649 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 TCTE1Q5JU00 501 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 AGAP7PQ5VUJ5 663 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 FCRL6Q6DN72 434 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 TTC23LQ6PF05 361 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 RAB42Q8N4Z0 105 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 CLDN19Q8N6F1 224 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 TTC29Q8NA56 475 aaPredicted RBP13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 ST6GALNAC3Q8NDV1 305 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 GSDMBQ8TAX9 411 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 KRT35Q92764 455 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 MRFAP1L1Q96HT8 127 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 AGAP4Q96P64 663 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 SPRTNQ9H040 489 aaPredicted RBP13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 GOLPH3Q9H4A6 298 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 WDR54Q9H977 334 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 FAM60AQ9NP50 221 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 IL1RAPL1Q9NZN1 696 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 CDYLQ9Y232 598 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 PCDHGA10Q9Y5H3 936 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 PCDHA3Q9Y5H8 950 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 PCDHA13Q9Y5I0 950 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 MRFAP1Q9Y605 127 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 ESPL1Q14674 2120 aa13.69□□□□□ -0.22
SMARCD2-205ENST00000577686 ICE1Q9Y2F5 2266 aa13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 FKBP9O95302 570 aa13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 ALAS2P22557 587 aa13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 MMP11P24347 488 aa13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 RAB28P51157 221 aa13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 OLIG2Q13516 323 aa13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 SLC9A5Q14940 896 aa13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 TMED2Q15363 201 aa13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 SKOR2Q2VWA4 1001 aaPredicted RBP13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 ZNF658BQ4V348 819 aaPredicted RBP13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 PRAMEF13Q5VWM6 474 aa13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 B3GNTL1Q67FW5 361 aaPredicted RBP13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 ZNF787Q6DD87 383 aa13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 DENND5AQ6IQ26 1287 aa13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 MRPL14Q6P1L8 145 aaKnown RBP13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 PPP1R32Q7Z5V6 425 aa13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 MOCOSQ96EN8 888 aa13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 CDKN2AIPNLQ96HQ2 116 aa13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 RAB11FIP5Q9BXF6 653 aa13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 C10orf88Q9H8K7 445 aa13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 EURLQ9NYK6 297 aa13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 FAM169AQ9Y6X4 670 aa13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 MYO9AB2RTY4 2548 aa13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 RELNP78509 3460 aa13.68□□□□□ -0.22
SMARCD2-205ENST00000577686 CCL22O00626 93 aa13.67□□□□□ -0.22
SMARCD2-205ENST00000577686 CLDN1O95832 211 aa13.67□□□□□ -0.22
SMARCD2-205ENST00000577686 S1PR4O95977 384 aa13.67□□□□□ -0.22
SMARCD2-205ENST00000577686 RNF224P0DH78 156 aa13.67□□□□□ -0.22
SMARCD2-205ENST00000577686 ACADLP28330 430 aa13.67□□□□□ -0.22
SMARCD2-205ENST00000577686 TSFMP43897 325 aaKnown RBP13.67□□□□□ -0.22
SMARCD2-205ENST00000577686 GABRA4P48169 554 aa13.67□□□□□ -0.22
SMARCD2-205ENST00000577686 MSLNQ13421 630 aaPredicted RBP13.67□□□□□ -0.22
SMARCD2-205ENST00000577686 SPARCL1Q14515 664 aa13.67□□□□□ -0.22
SMARCD2-205ENST00000577686 GRM7Q14831 915 aa13.67□□□□□ -0.22
SMARCD2-205ENST00000577686 POU6F1Q14863 301 aa13.67□□□□□ -0.22
SMARCD2-205ENST00000577686 NAA25Q14CX7 972 aa13.67□□□□□ -0.22
SMARCD2-205ENST00000577686 BRD3Q15059 726 aa13.67□□□□□ -0.22
SMARCD2-205ENST00000577686 RBBP7Q16576 425 aa13.67□□□□□ -0.22
SMARCD2-205ENST00000577686 FAM214AQ32MH5 1076 aa13.67□□□□□ -0.22
SMARCD2-205ENST00000577686 TUBB8Q3ZCM7 444 aa13.67□□□□□ -0.22
SMARCD2-205ENST00000577686 AARS2Q5JTZ9 985 aaKnown RBP13.67□□□□□ -0.22
SMARCD2-205ENST00000577686 AFTPHQ6ULP2 937 aa13.67□□□□□ -0.22
SMARCD2-205ENST00000577686 KLHDC8BQ8IXV7 354 aa13.67□□□□□ -0.22
SMARCD2-205ENST00000577686 DNAJC22Q8N4W6 341 aa13.67□□□□□ -0.22
SMARCD2-205ENST00000577686 SEMA3GQ9NS98 782 aa13.67□□□□□ -0.22
SMARCD2-205ENST00000577686 FBXL4Q9UKA2 621 aa13.67□□□□□ -0.22
SMARCD2-205ENST00000577686 HEATR9A2RTY3 570 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 ERI2A8K979 691 aaKnown RBP13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 H3BMH7 237 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 DSCR3O14972 297 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 APOA4P06727 396 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 EDN3P14138 238 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 PKLRP30613 574 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 CARSP49589 748 aaKnown RBP13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 CDKN1CP49918 316 aaPredicted RBP13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 CDC16Q13042 620 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms