RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 PPP1R12AO14974 1030 aaPredicted RBP6.09□□□□□ -1.43
NUP88-212ENST00000576708 KMOO15229 486 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 CST8O60676 142 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 RASSF9O75901 435 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 MTA2O94776 668 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 UBXN7O94888 489 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 CDK14O94921 469 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 C9P02748 559 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 SFTPCP11686 197 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 SLC2A4P14672 509 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 XRCC1P18887 633 aaPredicted RBP6.09□□□□□ -1.43
NUP88-212ENST00000576708 NR1D1P20393 614 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 DLSTP36957 453 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 BCL6P41182 706 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 ARHGAP25P42331 645 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 CDKN2BP42772 138 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 CCR10P46092 362 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 MARCKSL1P49006 195 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 CTSCP53634 463 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 WNT3AP56704 352 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 DCDC1P59894 354 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 CDC20Q12834 499 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 TMEM115Q12893 351 aaPredicted RBP6.09□□□□□ -1.43
NUP88-212ENST00000576708 OLIG2Q13516 323 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 GPR18Q14330 331 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 KCNAB1Q14722 419 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 PRKD1Q15139 912 aaPredicted RBP6.09□□□□□ -1.43
NUP88-212ENST00000576708 CHRNA6Q15825 494 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 LONRF2Q1L5Z9 754 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 SIRPB2Q5JXA9 342 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 CACHD1Q5VU97 1274 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 IRGCQ6NXR0 463 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 DUS1LQ6P1R4 473 aaKnown RBP6.09□□□□□ -1.43
NUP88-212ENST00000576708 ABRAXAS1Q6UWZ7 409 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 FAM151BQ6UXP7 276 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 CERS6Q6ZMG9 384 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 SPOCD1Q6ZMY3 1216 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 ZC3H18Q86VM9 953 aaKnown RBP6.09□□□□□ -1.43
NUP88-212ENST00000576708 PLXDC1Q8IUK5 500 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 TRAPPC5Q8IUR0 188 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 VSTM4Q8IW00 320 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 RHOT1Q8IXI2 618 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 ZNF567Q8N184 647 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 RASGEF1AQ8N9B8 481 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 GPR150Q8NGU9 434 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 GDAP1Q8TB36 358 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 STARD8Q92502 1023 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 KIAA1143Q96AT1 154 aaPredicted RBP6.09□□□□□ -1.43
NUP88-212ENST00000576708 OXNAD1Q96HP4 312 aaPredicted RBP6.09□□□□□ -1.43
NUP88-212ENST00000576708 TEKT5Q96M29 485 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 CCDC42Q96M95 316 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 TEFMQ96QE5 360 aaKnown RBP6.09□□□□□ -1.43
NUP88-212ENST00000576708 OR6C1Q96RD1 312 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 RUFY1Q96T51 708 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 ZSCAN5AQ9BUG6 496 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.09□□□□□ -1.43
NUP88-212ENST00000576708 AKIRIN1Q9H9L7 192 aaPredicted RBP6.09□□□□□ -1.43
NUP88-212ENST00000576708 IL26Q9NPH9 171 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 ABHD10Q9NUJ1 306 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 ZNHIT6Q9NWK9 470 aaKnown RBP6.09□□□□□ -1.43
NUP88-212ENST00000576708 NFKBIL1Q9UBC1 381 aaPredicted RBP6.09□□□□□ -1.43
NUP88-212ENST00000576708 CROTQ9UKG9 612 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 PSMD13Q9UNM6 376 aa6.09□□□□□ -1.43
NUP88-212ENST00000576708 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.09□□□□□ -1.43
NUP88-212ENST00000576708 LOC285095A0A1B0GVY8 99 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 OR2AG2A6NM03 316 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 GAPDHSO14556 408 aaPredicted RBP6.08□□□□□ -1.44
NUP88-212ENST00000576708 SPOPO43791 374 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 VEGFDO43915 354 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 MFAP3LO75121 409 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 KATNA1O75449 491 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 POP7O75817 140 aaKnown RBP6.08□□□□□ -1.44
NUP88-212ENST00000576708 KIAA0754O94854 1291 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 AGTP01019 485 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 ANKRD34CP0C6C1 535 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 ZFXP17010 805 aaPredicted RBP6.08□□□□□ -1.44
NUP88-212ENST00000576708 TCN2P20062 427 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 IDSP22304 550 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 FPR2P25090 351 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 PBLDP30039 288 aaPredicted RBP6.08□□□□□ -1.44
NUP88-212ENST00000576708 STAT5AP42229 794 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 ARCN1P48444 511 aaKnown RBP6.08□□□□□ -1.44
NUP88-212ENST00000576708 RPL11P62913 178 aaKnown RBP6.08□□□□□ -1.44
NUP88-212ENST00000576708 ABHD18Q0P651 414 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 GTF2H3Q13889 308 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 ERV3-1Q14264 604 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 NFE2L1Q14494 772 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 RPE65Q16518 533 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 TAZQ16635 292 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 ODF2Q5BJF6 829 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 LRRC38Q5VT99 294 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 PDPK2PQ6A1A2 396 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 BICRALQ6AI39 1079 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 CCDC70Q6NSX1 233 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 FBXO38Q6PIJ6 1188 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 TMEM220Q6QAJ8 160 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 DET1Q7L5Y6 550 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 PID1Q7Z2X4 250 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 RASGRP3Q8IV61 690 aa6.08□□□□□ -1.44
NUP88-212ENST00000576708 RHOT2Q8IXI1 618 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms