RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 TADA1Q96BN2 335 aa17.52■□□□□ 0.39
ATPAF1-214ENST00000576409 PKP4Q99569 1192 aa17.52■□□□□ 0.39
ATPAF1-214ENST00000576409 MEAF6Q9HAF1 191 aa17.52■□□□□ 0.39
ATPAF1-214ENST00000576409 RHCGQ9UBD6 479 aa17.52■□□□□ 0.39
ATPAF1-214ENST00000576409 PCDHGB5Q9Y5G0 923 aa17.52■□□□□ 0.39
ATPAF1-214ENST00000576409 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.52■□□□□ 0.39
ATPAF1-214ENST00000576409 SMCHD1A6NHR9 2005 aa17.52■□□□□ 0.39
ATPAF1-214ENST00000576409 IGKV6D-21A0A0A0MT36 114 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 H3BMQ9 156 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 GABRR2P28476 465 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 TPRG1LQ5T0D9 272 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 CYP2U1Q7Z449 544 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 COG8Q96MW5 612 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 LHPPQ9H008 270 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 TVP23BQ9NYZ1 205 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 SPG21Q9NZD8 308 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 SLC22A1O15245 554 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 CLDN7O95471 211 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 AGXTP21549 392 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 FBXW4P57775 412 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 SNAPC1Q16533 368 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 IZUMO1Q8IYV9 350 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 METTL25Q8N6Q8 603 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 ASZ1Q8WWH4 475 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 EXOSC8Q96B26 276 aaKnown RBP17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 ZIM2Q9NZV7 527 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 SEC14L3Q9UDX4 400 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 A0A1B0GVM2 712 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 ANKRD66B4E2M5 251 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 GABRB3P28472 473 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 LEPRP48357 1165 aaKnown RBP17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 OLR1P78380 273 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 RAET1GQ6H3X3 334 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 BLOC1S3Q6QNY0 202 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 GHDCQ8N2G8 530 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 NPLOC4Q8TAT6 608 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 IGSF8Q969P0 613 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 POLR2J2Q9GZM3 115 aaKnown RBP17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 CLEC4MQ9H2X3 399 aaPredicted RBP17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 C14orf119Q9NWQ9 140 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 MRPL39Q9NYK5 338 aaKnown RBP17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 TLR6Q9Y2C9 796 aa17.51■□□□□ 0.39
ATPAF1-214ENST00000576409 GPR39O43194 453 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 OR2B6P58173 313 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 IL18Q14116 193 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 TMEM126BQ8IUX1 230 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 HJURPQ8NCD3 748 aaPredicted RBP17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 ARMC5Q96C12 935 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 TTPALQ9BTX7 342 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 SP140LQ9H930 580 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 TBC1D17Q9HA65 648 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 A8MU76 341 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 M0QX08 132 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 RASAL1O95294 804 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 RPLP0P05388 317 aaKnown RBP17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 ENO2P09104 434 aaPredicted RBP17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 KCNE1P15382 129 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 BARD1Q99728 777 aaKnown RBP17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 PTPN18Q99952 460 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 FUOMA2VDF0 154 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 SGTAO43765 313 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 SOX14O95416 240 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 SNAI1O95863 264 aaPredicted RBP17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 MT-ND2P03891 347 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 ITGA1P56199 1179 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 CD83Q01151 205 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 ARHGEF6Q15052 776 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 NFKBIZQ9BYH8 718 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 TIGARQ9NQ88 270 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 GABBR2O75899 941 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 VIPP01282 170 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 SPAM1P38567 509 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 HSPB3Q12988 150 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 CHRNA6Q15825 494 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 FAM219BQ5XKK7 198 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 PSAPL1Q6NUJ1 521 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 MZT2BQ6NZ67 158 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 USP30Q70CQ3 517 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 RETREG3Q86VR2 466 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 OR10G2Q8NGC3 310 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 STARD8Q92502 1023 aa17.5■□□□□ 0.39
ATPAF1-214ENST00000576409 PRSS51A0A1B0GVH4 220 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 APOL3O95236 402 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 C8BP07358 591 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 PRKAR2AP13861 404 aaKnown RBP17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 OPRL1P41146 370 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 HLCSP50747 726 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 CD47Q08722 323 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 MTSS1LQ765P7 747 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 UPF1Q92900 1129 aaKnown RBP eCLIP17.49■□□□□ 0.395e-6■■■■□ 24.5
ATPAF1-214ENST00000576409 UROC1Q96N76 676 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 DUSP26Q9BV47 211 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 RRAGCQ9HB90 399 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 CFAP97Q9P2B7 532 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 GSAPA4D1B5 854 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 HAS3O00219 553 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 TGFB1P01137 390 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 POLR2IP36954 125 aaKnown RBP17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 ATAD3BQ5T9A4 648 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 SLC24A5Q71RS6 500 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms