RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 SLC9A6Q92581 669 aa4.82□□□□□ -1.64
TSR1-203ENST00000575049 RIT1Q92963 219 aa4.82□□□□□ -1.64
TSR1-203ENST00000575049 MUS81Q96NY9 551 aa4.82□□□□□ -1.64
TSR1-203ENST00000575049 RBM14Q96PK6 669 aaKnown RBP4.82□□□□□ -1.64
TSR1-203ENST00000575049 PANX3Q96QZ0 392 aa4.82□□□□□ -1.64
TSR1-203ENST00000575049 SNX18Q96RF0 628 aa4.82□□□□□ -1.64
TSR1-203ENST00000575049 NUDCD1Q96RS6 583 aa4.82□□□□□ -1.64
TSR1-203ENST00000575049 OLFM1Q99784 485 aa4.82□□□□□ -1.64
TSR1-203ENST00000575049 SSX3Q99909 188 aa4.82□□□□□ -1.64
TSR1-203ENST00000575049 TMEM47Q9BQJ4 181 aa4.82□□□□□ -1.64
TSR1-203ENST00000575049 CARD9Q9H257 536 aa4.82□□□□□ -1.64
TSR1-203ENST00000575049 RMND5AQ9H871 391 aa4.82□□□□□ -1.64
TSR1-203ENST00000575049 LRRC40Q9H9A6 602 aa4.82□□□□□ -1.64
TSR1-203ENST00000575049 TXNRD2Q9NNW7 524 aa4.82□□□□□ -1.64
TSR1-203ENST00000575049 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.82□□□□□ -1.646e-45■■□□□ 12.3
TSR1-203ENST00000575049 TAS2R14Q9NYV8 317 aa4.82□□□□□ -1.64
TSR1-203ENST00000575049 RAI14Q9P0K7 980 aa4.82□□□□□ -1.64
TSR1-203ENST00000575049 ZMAT5Q9UDW3 170 aaKnown RBP4.82□□□□□ -1.64
TSR1-203ENST00000575049 RCOR1Q9UKL0 485 aa4.82□□□□□ -1.64
TSR1-203ENST00000575049 ATP6V1DQ9Y5K8 247 aa4.82□□□□□ -1.64
TSR1-203ENST00000575049 ZCCHC11Q5TAX3 1644 aaKnown RBP4.82□□□□□ -1.64
TSR1-203ENST00000575049 GLI2P10070 1586 aa4.82□□□□□ -1.64
TSR1-203ENST00000575049 CD163L1Q9NR16 1453 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 MROH2AA6NES4 1674 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 FAM230AA0A1W2PPH8 454 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 MAGEA13PA6NCF6 341 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 TMEM247A6NEH6 219 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 L7N2F9 121 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 TULP2O00295 520 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 PLK4O00444 970 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 CES2O00748 559 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 PRYO14603 147 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 SUV39H1O43463 412 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 IDH1O75874 414 aaKnown RBP4.81□□□□□ -1.64
TSR1-203ENST00000575049 GLCEO94923 617 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 CHRM2P08172 466 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 CYP2A7P20853 494 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 TGM2P21980 687 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 ACAT1P24752 427 aaKnown RBP4.81□□□□□ -1.64
TSR1-203ENST00000575049 ITGB8P26012 769 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 CHMLP26374 656 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 ITPKBP27987 946 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 EPHB2P29323 1055 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 CORO1AP31146 461 aaKnown RBP4.81□□□□□ -1.64
TSR1-203ENST00000575049 RYKP34925 604 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 PTGER1P34995 402 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 FOLR3P41439 243 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 PRCPP42785 496 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 VPS41P49754 854 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 E2F1Q01094 437 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 GALK2Q01415 458 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 SPIBQ01892 262 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 RHAGQ02094 409 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 SLC18A2Q05940 514 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 SPOCK1Q08629 439 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 DMWDQ09019 674 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 ABRQ12979 859 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 SNTB2Q13425 540 aaKnown RBP4.81□□□□□ -1.64
TSR1-203ENST00000575049 DDX39BQ13838 428 aaKnown RBP4.81□□□□□ -1.64
TSR1-203ENST00000575049 NADK2Q4G0N4 442 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 FAM98BQ52LJ0 330 aaKnown RBP4.81□□□□□ -1.64
TSR1-203ENST00000575049 ARL13AQ5H913 290 aaPredicted RBP4.81□□□□□ -1.64
TSR1-203ENST00000575049 CFAP157Q5JU67 520 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 TREML2Q5T2D2 321 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 TMEM268Q5VZI3 342 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 FBXO46Q6PJ61 603 aaPredicted RBP4.81□□□□□ -1.64
TSR1-203ENST00000575049 NOXA1Q86UR1 476 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 FOXP4Q8IVH2 680 aaPredicted RBP4.81□□□□□ -1.64
TSR1-203ENST00000575049 ZDHHC23Q8IYP9 409 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 KRT222Q8N1A0 295 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 C12orf76Q8N812 135 aaPredicted RBP4.81□□□□□ -1.64
TSR1-203ENST00000575049 C8orf58Q8NAV2 365 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 DRAXINQ8NBI3 349 aaPredicted RBP4.81□□□□□ -1.64
TSR1-203ENST00000575049 ZNF397Q8NF99 534 aaPredicted RBP4.81□□□□□ -1.64
TSR1-203ENST00000575049 TMEM185AQ8NFB2 350 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 ZNF671Q8TAW3 534 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 ACTRT2Q8TDY3 377 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 TTC25Q96NG3 672 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 TEFMQ96QE5 360 aaKnown RBP4.81□□□□□ -1.64
TSR1-203ENST00000575049 CRAMP1Q96RY5 1269 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 ASCL2Q99929 193 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 ABHD14AQ9BUJ0 271 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 LSG1Q9H089 658 aaKnown RBP4.81□□□□□ -1.64
TSR1-203ENST00000575049 TMEM117Q9H0C3 514 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 TSPYL1Q9H0U9 437 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 FN3KQ9H479 309 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 BPIFA1Q9NP55 256 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 SLCO1C1Q9NYB5 712 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 CCNL1Q9UK58 526 aaPredicted RBP4.81□□□□□ -1.64
TSR1-203ENST00000575049 FBXO4Q9UKT5 387 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 FZD4Q9ULV1 537 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 ITM2BQ9Y287 266 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.81□□□□□ -1.64
TSR1-203ENST00000575049 CLIC4Q9Y696 253 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 ABCC3O15438 1527 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 LRRC7Q96NW7 1537 aa4.81□□□□□ -1.64
TSR1-203ENST00000575049 CDK12Q9NYV4 1490 aaPredicted RBP4.81□□□□□ -1.64
TSR1-203ENST00000575049 KNDC1Q76NI1 1749 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 CCDC171Q6TFL3 1326 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 FRMPD1Q5SYB0 1578 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms