RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 DCDP81605 110 aaKnown RBP6.64□□□□□ -1.35
CHD3-213ENST00000571249 CACNG1Q06432 222 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 PMPCAQ10713 525 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 BRD3Q15059 726 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 MAN2A1Q16706 1144 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 LONRF2Q1L5Z9 754 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 UBAP2Q5T6F2 1119 aaKnown RBP6.64□□□□□ -1.35
CHD3-213ENST00000571249 MRPL14Q6P1L8 145 aaKnown RBP6.64□□□□□ -1.35
CHD3-213ENST00000571249 KIRREL2Q6UWL6 708 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 ABRAXAS1Q6UWZ7 409 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 GK5Q6ZS86 529 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 ARHGEF19Q8IW93 802 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 FAM20CQ8IXL6 584 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 MYRIPQ8NFW9 859 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 SUN3Q8TAQ9 357 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 TRIM51Q9BSJ1 452 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 GRIP2Q9C0E4 1043 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 VPS16Q9H269 839 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 SYNCQ9H7C4 482 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 PDFQ9HBH1 243 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 PLCB1Q9NQ66 1216 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 TMEM51Q9NW97 253 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 NOCTQ9UK39 431 aaKnown RBP6.64□□□□□ -1.35
CHD3-213ENST00000571249 MRPS2Q9Y399 296 aaKnown RBP6.64□□□□□ -1.35
CHD3-213ENST00000571249 DNAJC13O75165 2243 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 OR5K3A6NET4 321 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 WASH4PA8MWX3 477 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 IDSB3KWA1 339 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 PRRG2O14669 202 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 ASNA1O43681 348 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 SMPD2O60906 423 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 PALMO75781 387 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 PRAMEF1O95521 474 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 MLYCDO95822 493 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 TNNT1P13805 278 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 CTPS1P17812 591 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 IDSP22304 550 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 KPNA2P52292 529 aaKnown RBP6.63□□□□□ -1.35
CHD3-213ENST00000571249 YBEYP58557 167 aaPredicted RBP6.63□□□□□ -1.35
CHD3-213ENST00000571249 ALDH6A1Q02252 535 aaKnown RBP6.63□□□□□ -1.35
CHD3-213ENST00000571249 UBXN1Q04323 297 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 INSCQ1MX18 579 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 TUBB8Q3ZCM7 444 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 PARP15Q460N3 678 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 PTPN20Q4JDL3 420 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 VWA3BQ502W6 1294 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 RAB6CQ53S08 254 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 TDRD12Q587J7 1177 aaKnown RBP6.63□□□□□ -1.35
CHD3-213ENST00000571249 FKBP15Q5T1M5 1219 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 ZNF648Q5T619 568 aaPredicted RBP6.63□□□□□ -1.35
CHD3-213ENST00000571249 ARMC6Q6NXE6 501 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 TRIM65Q6PJ69 517 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 CRTC3Q6UUV7 619 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 PRSS57Q6UWY2 283 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 USP45Q70EL2 814 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 LIX1LQ8IVB5 337 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 TRIM59Q8IWR1 403 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 SIRT6Q8N6T7 355 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 RTL3Q8N8U3 475 aaKnown RBP6.63□□□□□ -1.35
CHD3-213ENST00000571249 C1orf131Q8NDD1 294 aaKnown RBP6.63□□□□□ -1.35
CHD3-213ENST00000571249 OR8K1Q8NGG5 319 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 FBXO27Q8NI29 283 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 PSMF1Q92530 271 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 RND1Q92730 232 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 SCRN2Q96FV2 425 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 PERPQ96FX8 193 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 CFAP57Q96MR6 1250 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 CINPQ9BW66 212 aaPredicted RBP6.63□□□□□ -1.35
CHD3-213ENST00000571249 AMBRA1Q9C0C7 1298 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 RAB6CQ9H0N0 254 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 CARD9Q9H257 536 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 NDST4Q9H3R1 872 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 SYTL2Q9HCH5 934 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 ARFGAP3Q9NP61 516 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 ABHD10Q9NUJ1 306 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 ARMCX1Q9P291 453 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 ATXN10Q9UBB4 475 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 CDC42EP3Q9UKI2 254 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 CNTN6Q9UQ52 1028 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 PPP2R2CQ9Y2T4 447 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 HS3ST3B1Q9Y662 390 aa6.63□□□□□ -1.35
CHD3-213ENST00000571249 A0A1W2PQ67 120 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 OR6C74A6NCV1 312 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 MBD3L4A6NDZ8 208 aaPredicted RBP6.62□□□□□ -1.35
CHD3-213ENST00000571249 MBD3L5A6NJ08 208 aaPredicted RBP6.62□□□□□ -1.35
CHD3-213ENST00000571249 CETN3O15182 167 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 SLC16A3O15427 465 aaKnown RBP6.62□□□□□ -1.35
CHD3-213ENST00000571249 PRAMEF11O60813 436 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 BPNT1O95861 308 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 MYBL2P10244 700 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 ZNF7P17097 686 aaPredicted RBP6.62□□□□□ -1.35
CHD3-213ENST00000571249 CDH3P22223 829 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 FLT3P36888 993 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 MTIF2P46199 727 aaKnown RBP6.62□□□□□ -1.35
CHD3-213ENST00000571249 CTSCP53634 463 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 NR1H2P55055 460 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 SNX16P57768 344 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 ETF1P62495 437 aaKnown RBP6.62□□□□□ -1.35
CHD3-213ENST00000571249 ZBED6P86452 979 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 RELBQ01201 579 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms