RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 MTBPQ96DY7 904 aa3.99□□□□□ -1.77
NUP88-202ENST00000570937 APOPT1Q96IL0 206 aa3.99□□□□□ -1.77
NUP88-202ENST00000570937 CPB2Q96IY4 423 aa3.99□□□□□ -1.77
NUP88-202ENST00000570937 OR1F2PQ96R84 312 aa3.99□□□□□ -1.77
NUP88-202ENST00000570937 TSPAN18Q96SJ8 248 aa3.99□□□□□ -1.77
NUP88-202ENST00000570937 PKP4Q99569 1192 aa3.99□□□□□ -1.77
NUP88-202ENST00000570937 CDCA3Q99618 268 aaPredicted RBP3.99□□□□□ -1.77
NUP88-202ENST00000570937 CCDC94Q9BW85 323 aaPredicted RBP3.99□□□□□ -1.77
NUP88-202ENST00000570937 APOL6Q9BWW8 343 aa3.99□□□□□ -1.77
NUP88-202ENST00000570937 PANK2Q9BZ23 570 aa3.99□□□□□ -1.77
NUP88-202ENST00000570937 NUF2Q9BZD4 464 aa3.99□□□□□ -1.77
NUP88-202ENST00000570937 PLEKHA4Q9H4M7 779 aa3.99□□□□□ -1.77
NUP88-202ENST00000570937 TLE6Q9H808 572 aa3.99□□□□□ -1.77
NUP88-202ENST00000570937 SLC38A7Q9NVC3 462 aa3.99□□□□□ -1.77
NUP88-202ENST00000570937 TBC1D13Q9NVG8 400 aa3.99□□□□□ -1.77
NUP88-202ENST00000570937 SMARCAL1Q9NZC9 954 aa3.99□□□□□ -1.77
NUP88-202ENST00000570937 THEGQ9P2T0 379 aa3.99□□□□□ -1.77
NUP88-202ENST00000570937 RCOR1Q9UKL0 485 aa3.99□□□□□ -1.77
NUP88-202ENST00000570937 CDC14AQ9UNH5 594 aa3.99□□□□□ -1.77
NUP88-202ENST00000570937 COL4A6Q14031 1691 aa3.99□□□□□ -1.77
NUP88-202ENST00000570937 CHD7Q9P2D1 2997 aa3.99□□□□□ -1.77
NUP88-202ENST00000570937 ATXN2Q99700 1313 aaKnown RBP3.98□□□□□ -1.77
NUP88-202ENST00000570937 A0A1W2PQM1 296 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 hDV102S1A0JD36 115 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 EPOPA6NHQ4 379 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 K7ENM7 598 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 B4GALT5O43286 388 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 KRT86O43790 486 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 NDUFS7O75251 213 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 TADA2AO75478 443 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 CXCL14O95715 111 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 PMS2P2O95744 297 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 TFP02787 698 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 MCF2P10911 925 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 IRF1P10914 325 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 SRCP12931 536 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 CMA1P23946 247 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 RPL9P32969 192 aaKnown RBP3.98□□□□□ -1.77
NUP88-202ENST00000570937 CA8P35219 290 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 ARL1P40616 181 aaPredicted RBP3.98□□□□□ -1.77
NUP88-202ENST00000570937 LIG4P49917 911 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 ZNF131P52739 623 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 RPP30P78346 268 aaKnown RBP3.98□□□□□ -1.77
NUP88-202ENST00000570937 GTF2BQ00403 316 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 ELAVL2Q12926 359 aaKnown RBP3.98□□□□□ -1.77
NUP88-202ENST00000570937 KRT81Q14533 505 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 SMC1AQ14683 1233 aaKnown RBP3.98□□□□□ -1.77
NUP88-202ENST00000570937 RNPS1Q15287 305 aaKnown RBP3.98□□□□□ -1.77
NUP88-202ENST00000570937 OASLQ15646 514 aaKnown RBP3.98□□□□□ -1.77
NUP88-202ENST00000570937 HERC4Q5GLZ8 1057 aaPredicted RBP3.98□□□□□ -1.77
NUP88-202ENST00000570937 SPECC1Q5M775 1068 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 ADALQ6DHV7 355 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 ANKRD54Q6NXT1 300 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 MTSS1LQ765P7 747 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 CD302Q8IX05 232 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 DHX40Q8IX18 779 aaKnown RBP3.98□□□□□ -1.77
NUP88-202ENST00000570937 CCDC65Q8IXS2 484 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 SYCP3Q8IZU3 236 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 PDILTQ8N807 584 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 MRPL43Q8N983 215 aaKnown RBP3.98□□□□□ -1.77
NUP88-202ENST00000570937 TMEM161BQ8NDZ6 487 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 SPATA3Q8NHX4 192 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 CREB3L4Q8TEY5 395 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 CCDC47Q96A33 483 aaKnown RBP3.98□□□□□ -1.77
NUP88-202ENST00000570937 PABPC5Q96DU9 382 aaKnown RBP3.98□□□□□ -1.77
NUP88-202ENST00000570937 SLITRK1Q96PX8 696 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 BBS4Q96RK4 519 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 GAD1Q99259 594 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 KIFC3Q9BVG8 833 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 HEMGNQ9BXL5 484 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 TNMDQ9H2S6 317 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 NXF3Q9H4D5 531 aaKnown RBP3.98□□□□□ -1.77
NUP88-202ENST00000570937 ST6GALNAC4Q9H4F1 302 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 PDZD7Q9H5P4 517 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 ESRP2Q9H6T0 727 aaKnown RBP3.98□□□□□ -1.77
NUP88-202ENST00000570937 CWH43Q9H720 699 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 TMEM206Q9H813 350 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 PLEKHA5Q9HAU0 1116 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 MAGEE1Q9HCI5 957 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 MKKSQ9NPJ1 570 aaPredicted RBP3.98□□□□□ -1.77
NUP88-202ENST00000570937 WASH6PQ9NQA3 447 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 MRPL17Q9NRX2 175 aaKnown RBP3.98□□□□□ -1.77
NUP88-202ENST00000570937 BLOC1S4Q9NUP1 217 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 PANK4Q9NVE7 773 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 MPP6Q9NZW5 540 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 PDP2Q9P2J9 529 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 HOOK1Q9UJC3 728 aaKnown RBP3.98□□□□□ -1.77
NUP88-202ENST00000570937 SLC13A4Q9UKG4 626 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 FAM96BQ9Y3D0 163 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 STON1Q9Y6Q2 735 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 TET1Q8NFU7 2136 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 A0A0C4DFX4 3053 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 EYSQ5T1H1 3165 aa3.98□□□□□ -1.77
NUP88-202ENST00000570937 MICAL3Q7RTP6 2002 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 PRUNE2Q8WUY3 3088 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 TRANK1O15050 2925 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 SAA2-SAA4A0A096LPE2 208 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 TEX13CA0A0J9YWL9 993 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 PVALEFA0A1B0GWK0 134 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 TSPAN4O14817 238 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms