RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 NOBOXO60393 691 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 STK16O75716 305 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 VARSP26640 1264 aaKnown RBP8.57□□□□□ -1.04
LINC00558-201ENST00000569422 HLA-FP30511 346 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 CCR7P32248 378 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 RFC2P35250 354 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 RANBP1P43487 201 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 PCBP2Q15366 365 aaKnown RBP eCLIP8.57□□□□□ -1.04
LINC00558-201ENST00000569422 AASDHQ4L235 1098 aaPredicted RBP8.57□□□□□ -1.04
LINC00558-201ENST00000569422 ENPP6Q6UWR7 440 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 DLEU7Q6UYE1 221 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 DPY19L3Q6ZPD9 716 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 TMEM25Q86YD3 366 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 CLVS1Q8IUQ0 354 aaPredicted RBP8.57□□□□□ -1.04
LINC00558-201ENST00000569422 NXPE1Q8N323 547 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 DHRSXQ8N5I4 330 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 FAM81AQ8TBF8 368 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 MIPOL1Q8TD10 442 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 SLC13A3Q8WWT9 602 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 RHBDF1Q96CC6 855 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 UHRF1Q96T88 793 aaPredicted RBP8.57□□□□□ -1.04
LINC00558-201ENST00000569422 COPS8Q99627 209 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 C1QTNF3Q9BXJ4 246 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 SPG21Q9NZD8 308 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 PTBP2Q9UKA9 531 aaKnown RBP8.57□□□□□ -1.04
LINC00558-201ENST00000569422 PCDHGB3Q9Y5G1 929 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 K7EPI3 171 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 FKTNO75072 461 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 WDR47O94967 919 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 KCNH1O95259 989 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 SRCP12931 536 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 CSF2RAP15509 400 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 LHCGRP22888 699 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 CTHP32929 405 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 RPS9P46781 194 aaKnown RBP8.56□□□□□ -1.04
LINC00558-201ENST00000569422 GNPDA1P46926 289 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 APOFQ13790 326 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 RAB33AQ14088 237 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 NEDD8Q15843 81 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 SUSD1Q6UWL2 747 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 UBE2R2Q712K3 238 aaPredicted RBP8.56□□□□□ -1.04
LINC00558-201ENST00000569422 VRK3Q8IV63 474 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 OR2T12Q8NG77 320 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 ZFAND2BQ8WV99 257 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 FAM162AQ96A26 154 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 TRMT2BQ96GJ1 504 aaKnown RBP8.56□□□□□ -1.04
LINC00558-201ENST00000569422 EGLN2Q96KS0 407 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 OR52E6Q96RD3 313 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 EBPLQ9BY08 206 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 LRTM1Q9HBL6 345 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 NDUFA13Q9P0J0 144 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 LUZP4Q9P127 313 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 ADGRE2Q9UHX3 823 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 OARD1Q9Y530 152 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 SCN5AQ14524 2016 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 CASP8AP2Q9UKL3 1982 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 TCRBV5S2A0A599 114 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 LEFTY2O00292 366 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 ACOX3O15254 700 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 ZNF821O75541 412 aaPredicted RBP8.56□□□□□ -1.04
LINC00558-201ENST00000569422 GLUD1P00367 558 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 CAPNS1P04632 268 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 GPIP06744 558 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 C8AP07357 584 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 ANXA5P08758 320 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 RAC2P15153 192 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 PRKACGP22612 351 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 SLC5A2P31639 672 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 TPD52P55327 224 aaPredicted RBP8.56□□□□□ -1.04
LINC00558-201ENST00000569422 PTSQ03393 145 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 ILF2Q12905 390 aaKnown RBP8.56□□□□□ -1.04
LINC00558-201ENST00000569422 TMTC4Q5T4D3 741 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 GPRC6AQ5T6X5 926 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 ITIH5Q86UX2 942 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 LURAP1LQ8IV03 231 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 ESX1Q8N693 406 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 CYB5D2Q8WUJ1 264 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 PPP3R2Q96LZ3 170 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 SLC46A2Q9BY10 475 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 ANKRD60Q9BZ19 345 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 ELOVL6Q9H5J4 265 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 SMURF2Q9HAU4 748 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 PARVBQ9HBI1 364 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 HPS4Q9NQG7 708 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 SLC6A13Q9NSD5 602 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 DMTF1Q9Y222 760 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 SLC22A14Q9Y267 594 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 INVSQ9Y283 1065 aa8.56□□□□□ -1.04
LINC00558-201ENST00000569422 FRMPD3Q5JV73 1810 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.55□□□□□ -1.04
LINC00558-201ENST00000569422 PDYNP01213 254 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 C1QCP02747 245 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 PGRP06401 933 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 ENO2P09104 434 aaPredicted RBP8.55□□□□□ -1.04
LINC00558-201ENST00000569422 CDH2P19022 906 aaPredicted RBP8.55□□□□□ -1.04
LINC00558-201ENST00000569422 ELK4P28324 431 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 MTHFRP42898 656 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 EEFSECP57772 596 aaKnown RBP8.55□□□□□ -1.04
LINC00558-201ENST00000569422 SNRPD1P62314 119 aaKnown RBP8.55□□□□□ -1.04
LINC00558-201ENST00000569422 CHRNB3Q05901 458 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms