RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 ATG14Q6ZNE5 492 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 SYDE1Q6ZW31 735 aaPredicted RBP16.18■□□□□ 0.18
USB1-211ENST00000565662 APLFQ8IW19 511 aaPredicted RBP16.18■□□□□ 0.18
USB1-211ENST00000565662 PPIL6Q8IXY8 311 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 UNC5BQ8IZJ1 945 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 DSELQ8IZU8 1212 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 EXD3Q8N9H8 876 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 CT55Q8WUE5 264 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 NAT14Q8WUY8 206 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 MR1Q95460 341 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 NLNQ9BYT8 704 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 SPATA7Q9P0W8 599 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 IL17BQ9UHF5 180 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 SNX12Q9UMY4 172 aa16.18■□□□□ 0.18
USB1-211ENST00000565662 BAHCC1Q9P281 2608 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 ISM1B1AKI9 464 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 MEN1O00255 615 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 EIF3FO00303 357 aaPredicted RBP16.17■□□□□ 0.18
USB1-211ENST00000565662 RASGRF2O14827 1237 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 NKX2-8O15522 239 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 RFPL1O75677 317 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 USP1O94782 785 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 TTC4O95801 387 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 CD9P21926 228 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 NMBRP28336 390 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 OAS2P29728 719 aaKnown RBP16.17■□□□□ 0.18
USB1-211ENST00000565662 ARCN1P48444 511 aaKnown RBP16.17■□□□□ 0.18
USB1-211ENST00000565662 PMS2P54278 862 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 EIF3BP55884 814 aaKnown RBP16.17■□□□□ 0.18
USB1-211ENST00000565662 CYP4F2P78329 520 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 NFATC3Q12968 1075 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 DHX34Q14147 1143 aaKnown RBP16.17■□□□□ 0.18
USB1-211ENST00000565662 PPP1R7Q15435 360 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 ZC3H12BQ5HYM0 836 aaKnown RBP16.17■□□□□ 0.18
USB1-211ENST00000565662 NEK10Q6ZWH5 1172 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 PRUNE1Q86TP1 453 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 HPS6Q86YV9 775 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 OR2L8Q8NGY9 312 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 HMGCLL1Q8TB92 370 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 SKA2Q8WVK7 121 aaPredicted RBP16.17■□□□□ 0.18
USB1-211ENST00000565662 SLCO2A1Q92959 643 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 MFSD3Q96ES6 412 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 FAM167BQ9BTA0 163 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 SEMA4CQ9C0C4 833 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 ACTL8Q9H568 366 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 UTP6Q9NYH9 597 aaKnown RBP16.17■□□□□ 0.18
USB1-211ENST00000565662 CDYLQ9Y232 598 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 FARSAQ9Y285 508 aaKnown RBP16.17■□□□□ 0.18
USB1-211ENST00000565662 MAN2B2Q9Y2E5 1009 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 SPTA1P02549 2419 aa16.17■□□□□ 0.18
USB1-211ENST00000565662 SLC28A2O43868 658 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 TIAF1O95411 115 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 NTRK1P04629 796 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 PIM1P11309 404 aaPredicted RBP16.16■□□□□ 0.18
USB1-211ENST00000565662 ENO3P13929 434 aaPredicted RBP16.16■□□□□ 0.18
USB1-211ENST00000565662 ARSFP54793 590 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 CRADDP78560 199 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 ILF2Q12905 390 aaKnown RBP16.16■□□□□ 0.18
USB1-211ENST00000565662 SEMA3AQ14563 771 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 ARHGAP19Q14CB8 494 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 DEFB109BQ30KR1 87 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 TCTE1Q5JU00 501 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 NEPROQ6NW34 567 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 TMEM135Q86UB9 458 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 CILP2Q8IUL8 1156 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 SLC35F6Q8N357 371 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 LPGAT1Q92604 370 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 SERPINB12Q96P63 405 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 OR2A14Q96R47 310 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 TXLNGQ9NUQ3 528 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 MARCH4Q9P2E8 410 aaPredicted RBP16.16■□□□□ 0.18
USB1-211ENST00000565662 RNF14Q9UBS8 474 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 SNX7Q9UNH6 387 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 PLCL2Q9UPR0 1127 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 PCDHGB7Q9Y5F8 929 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 KCNMB2Q9Y691 235 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 FAM169AQ9Y6X4 670 aa16.16■□□□□ 0.18
USB1-211ENST00000565662 TARM1B6A8C7 271 aa16.15■□□□□ 0.18
USB1-211ENST00000565662 ZSCAN9O15535 394 aaPredicted RBP16.15■□□□□ 0.18
USB1-211ENST00000565662 OR2B3O76000 313 aa16.15■□□□□ 0.18
USB1-211ENST00000565662 ITGB6P18564 788 aa16.15■□□□□ 0.18
USB1-211ENST00000565662 RORAP35398 523 aa16.15■□□□□ 0.18
USB1-211ENST00000565662 VPS41P49754 854 aa16.15■□□□□ 0.18
USB1-211ENST00000565662 RRADP55042 308 aa16.15■□□□□ 0.18
USB1-211ENST00000565662 ERV3-1Q14264 604 aa16.15■□□□□ 0.18
USB1-211ENST00000565662 LONRF1Q17RB8 773 aa16.15■□□□□ 0.18
USB1-211ENST00000565662 LACTB2Q53H82 288 aaPredicted RBP16.15■□□□□ 0.18
USB1-211ENST00000565662 RHBDD2Q6NTF9 364 aa16.15■□□□□ 0.18
USB1-211ENST00000565662 TCTN3Q6NUS6 607 aa16.15■□□□□ 0.18
USB1-211ENST00000565662 UGT3A1Q6NUS8 523 aa16.15■□□□□ 0.18
USB1-211ENST00000565662 PRICKLE2Q7Z3G6 844 aa16.15■□□□□ 0.18
USB1-211ENST00000565662 RAB43Q86YS6 212 aa16.15■□□□□ 0.18
USB1-211ENST00000565662 REXO1L1PQ8IX06 675 aa16.15■□□□□ 0.18
USB1-211ENST00000565662 SYTL1Q8IYJ3 562 aa16.15■□□□□ 0.18
USB1-211ENST00000565662 KCNJ9Q92806 393 aa16.15■□□□□ 0.18
USB1-211ENST00000565662 ZUFSPQ96AP4 578 aa16.15■□□□□ 0.18
USB1-211ENST00000565662 NACC2Q96BF6 587 aa16.15■□□□□ 0.18
USB1-211ENST00000565662 ZNF669Q96BR6 464 aaPredicted RBP16.15■□□□□ 0.18
USB1-211ENST00000565662 VPS50Q96JG6 964 aa16.15■□□□□ 0.18
USB1-211ENST00000565662 XKR8Q9H6D3 395 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms