RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 CCDC170Q8IYT3 715 aa20.15■□□□□ 0.82
HERC2-204ENST00000563945 DENND1AQ8TEH3 1009 aa20.15■□□□□ 0.82
HERC2-204ENST00000563945 DLG3Q92796 817 aa20.15■□□□□ 0.82
HERC2-204ENST00000563945 CALR3Q96L12 384 aaKnown RBP20.15■□□□□ 0.82
HERC2-204ENST00000563945 CHRNA10Q9GZZ6 450 aa20.15■□□□□ 0.82
HERC2-204ENST00000563945 ZNF552Q9H707 407 aaPredicted RBP20.15■□□□□ 0.82
HERC2-204ENST00000563945 LRRC40Q9H9A6 602 aa20.15■□□□□ 0.82
HERC2-204ENST00000563945 CENPEQ02224 2701 aa20.14■□□□□ 0.82
HERC2-204ENST00000563945 GOLGA6L9A6NEM1 432 aa20.14■□□□□ 0.81
HERC2-204ENST00000563945 PSMD3O43242 534 aa20.14■□□□□ 0.81
HERC2-204ENST00000563945 OR56A5P0C7T3 313 aa20.14■□□□□ 0.81
HERC2-204ENST00000563945 PRSS56P0CW18 603 aa20.14■□□□□ 0.81
HERC2-204ENST00000563945 ITGA3P26006 1051 aa20.14■□□□□ 0.81
HERC2-204ENST00000563945 ITIH4Q14624 930 aa20.14■□□□□ 0.81
HERC2-204ENST00000563945 POU6F1Q14863 301 aa20.14■□□□□ 0.81
HERC2-204ENST00000563945 KIR2DS3Q14952 304 aa20.14■□□□□ 0.81
HERC2-204ENST00000563945 ZIC1Q15915 447 aa20.14■□□□□ 0.81
HERC2-204ENST00000563945 ZNF658BQ4V348 819 aaPredicted RBP20.14■□□□□ 0.81
HERC2-204ENST00000563945 ZNF787Q6DD87 383 aa20.14■□□□□ 0.81
HERC2-204ENST00000563945 TTC13Q8NBP0 860 aa20.14■□□□□ 0.81
HERC2-204ENST00000563945 SPHK1Q9NYA1 384 aa20.14■□□□□ 0.81
HERC2-204ENST00000563945 TFR2Q9UP52 801 aa20.14■□□□□ 0.81
HERC2-204ENST00000563945 IPO7O95373 1038 aaKnown RBP20.13■□□□□ 0.81
HERC2-204ENST00000563945 AP2A1O95782 977 aa20.13■□□□□ 0.81
HERC2-204ENST00000563945 LDLRP01130 860 aa20.13■□□□□ 0.81
HERC2-204ENST00000563945 ARSFP54793 590 aa20.13■□□□□ 0.81
HERC2-204ENST00000563945 AIMP2Q13155 320 aaKnown RBP20.13■□□□□ 0.81
HERC2-204ENST00000563945 SLC5A12Q1EHB4 618 aa20.13■□□□□ 0.81
HERC2-204ENST00000563945 PIANPQ8IYJ0 282 aa20.13■□□□□ 0.81
HERC2-204ENST00000563945 OR5K2Q8NHB8 316 aa20.13■□□□□ 0.81
HERC2-204ENST00000563945 VPS50Q96JG6 964 aa20.13■□□□□ 0.81
HERC2-204ENST00000563945 TSPY26PQ9H489 355 aa20.13■□□□□ 0.81
HERC2-204ENST00000563945 WIPF3A6NGB9 483 aa20.12■□□□□ 0.81
HERC2-204ENST00000563945 AGPSO00116 658 aa20.12■□□□□ 0.81
HERC2-204ENST00000563945 GAS8O95995 478 aa20.12■□□□□ 0.81
HERC2-204ENST00000563945 MSNP26038 577 aaKnown RBP20.12■□□□□ 0.81
HERC2-204ENST00000563945 ACADLP28330 430 aa20.12■□□□□ 0.81
HERC2-204ENST00000563945 PTPN7P35236 360 aa20.12■□□□□ 0.81
HERC2-204ENST00000563945 GABRA4P48169 554 aa20.12■□□□□ 0.81
HERC2-204ENST00000563945 SKOR2Q2VWA4 1001 aaPredicted RBP20.12■□□□□ 0.81
HERC2-204ENST00000563945 PPP1R32Q7Z5V6 425 aa20.12■□□□□ 0.81
HERC2-204ENST00000563945 DNAJC22Q8N4W6 341 aa20.12■□□□□ 0.81
HERC2-204ENST00000563945 RNF214Q8ND24 703 aa20.12■□□□□ 0.81
HERC2-204ENST00000563945 NACC2Q96BF6 587 aa20.12■□□□□ 0.81
HERC2-204ENST00000563945 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.12■□□□□ 0.81
HERC2-204ENST00000563945 CDC23Q9UJX2 597 aa20.12■□□□□ 0.81
HERC2-204ENST00000563945 PLAGL1Q9UM63 463 aa20.12■□□□□ 0.81
HERC2-204ENST00000563945 DOPEY1Q5JWR5 2465 aa20.12■□□□□ 0.81
HERC2-204ENST00000563945 NBPF19A0A087WUL8 3843 aa20.11■□□□□ 0.81
HERC2-204ENST00000563945 CCDC88CQ9P219 2028 aa20.11■□□□□ 0.81
HERC2-204ENST00000563945 H3BMH7 237 aa20.11■□□□□ 0.81
HERC2-204ENST00000563945 HCRTR1O43613 425 aa20.11■□□□□ 0.81
HERC2-204ENST00000563945 CLDN1O95832 211 aa20.11■□□□□ 0.81
HERC2-204ENST00000563945 DCTP40126 519 aa20.11■□□□□ 0.81
HERC2-204ENST00000563945 SOX8P57073 446 aa20.11■□□□□ 0.81
HERC2-204ENST00000563945 TBX2Q13207 712 aaPredicted RBP20.11■□□□□ 0.81
HERC2-204ENST00000563945 P3H1Q32P28 736 aa20.11■□□□□ 0.81
HERC2-204ENST00000563945 MRPL14Q6P1L8 145 aaKnown RBP20.11■□□□□ 0.81
HERC2-204ENST00000563945 Q6ZS92 163 aa20.11■□□□□ 0.81
HERC2-204ENST00000563945 TTLL10Q6ZVT0 673 aa20.11■□□□□ 0.81
HERC2-204ENST00000563945 LINC00523Q86TU6 105 aa20.11■□□□□ 0.81
HERC2-204ENST00000563945 FAM71DQ8N9W8 422 aa20.11■□□□□ 0.81
HERC2-204ENST00000563945 SLC22A18Q96BI1 424 aa20.11■□□□□ 0.81
HERC2-204ENST00000563945 TSSK1BQ9BXA7 367 aa20.11■□□□□ 0.81
HERC2-204ENST00000563945 INTS7Q9NVH2 962 aaKnown RBP20.11■□□□□ 0.81
HERC2-204ENST00000563945 EURLQ9NYK6 297 aa20.11■□□□□ 0.81
HERC2-204ENST00000563945 IMPACTQ9P2X3 320 aa20.11■□□□□ 0.81
HERC2-204ENST00000563945 PRSS21Q9Y6M0 314 aa20.11■□□□□ 0.81
HERC2-204ENST00000563945 SPENQ96T58 3664 aaKnown RBP20.11■□□□□ 0.81
HERC2-204ENST00000563945 RPN2P04844 631 aa20.1■□□□□ 0.81
HERC2-204ENST00000563945 PPARGP37231 505 aaPredicted RBP20.1■□□□□ 0.81
HERC2-204ENST00000563945 CSE1LP55060 971 aaKnown RBP20.1■□□□□ 0.81
HERC2-204ENST00000563945 DNAJC21Q5F1R6 531 aaKnown RBP20.1■□□□□ 0.81
HERC2-204ENST00000563945 KCTD11Q693B1 232 aa20.1■□□□□ 0.81
HERC2-204ENST00000563945 PACS1Q6VY07 963 aa20.1■□□□□ 0.81
HERC2-204ENST00000563945 NAPRTQ6XQN6 538 aa20.1■□□□□ 0.81
HERC2-204ENST00000563945 MCATQ8IVS2 390 aaKnown RBP20.1■□□□□ 0.81
HERC2-204ENST00000563945 DNAAF3Q8N9W5 541 aa20.1■□□□□ 0.81
HERC2-204ENST00000563945 COG1Q8WTW3 980 aa20.1■□□□□ 0.81
HERC2-204ENST00000563945 UBE2Q2Q8WVN8 375 aa20.1■□□□□ 0.81
HERC2-204ENST00000563945 WDR77Q9BQA1 342 aaPredicted RBP20.1■□□□□ 0.81
HERC2-204ENST00000563945 PIH1D1Q9NWS0 290 aaKnown RBP20.1■□□□□ 0.81
HERC2-204ENST00000563945 SLC5A10A0PJK1 596 aa20.09■□□□□ 0.81
HERC2-204ENST00000563945 MASP2O00187 686 aa20.09■□□□□ 0.81
HERC2-204ENST00000563945 CTSBP07858 339 aa20.09■□□□□ 0.81
HERC2-204ENST00000563945 UMODP07911 640 aa20.09■□□□□ 0.81
HERC2-204ENST00000563945 MMP11P24347 488 aa20.09■□□□□ 0.81
HERC2-204ENST00000563945 PER3P56645 1201 aa20.09■□□□□ 0.81
HERC2-204ENST00000563945 ZC3H12BQ5HYM0 836 aaKnown RBP20.09■□□□□ 0.81
HERC2-204ENST00000563945 AGAP7PQ5VUJ5 663 aa20.09■□□□□ 0.81
HERC2-204ENST00000563945 PRAMEF13Q5VWM6 474 aa20.09■□□□□ 0.81
HERC2-204ENST00000563945 TTC23LQ6PF05 361 aa20.09■□□□□ 0.81
HERC2-204ENST00000563945 MICALCLQ6ZW33 695 aa20.09■□□□□ 0.81
HERC2-204ENST00000563945 OVCH1Q7RTY7 1134 aa20.09■□□□□ 0.81
HERC2-204ENST00000563945 CUZD1Q86UP6 607 aa20.09■□□□□ 0.81
HERC2-204ENST00000563945 KLHDC8BQ8IXV7 354 aa20.09■□□□□ 0.81
HERC2-204ENST00000563945 TC2NQ8N9U0 490 aa20.09■□□□□ 0.81
HERC2-204ENST00000563945 DNAJB14Q8TBM8 379 aa20.09■□□□□ 0.81
HERC2-204ENST00000563945 AGAP4Q96P64 663 aa20.09■□□□□ 0.81
HERC2-204ENST00000563945 RANBP9Q96S59 729 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms